Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.28■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.28■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.28■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.28■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.28■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.28■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 AL121829.2-201ENST00000620908 328 ntBASIC17.28■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.28■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.28■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.28■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.28■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.28■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.27■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.27■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 POM121L13P-201ENST00000422362 380 ntBASIC17.27■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC17.27■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.27■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.27■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 KRT18P6-201ENST00000555540 1265 ntBASIC17.27■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.27■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.27■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.27■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
IGKV1D-43A0A0B4J1Z2 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.27■□□□□ 0.35
IGKV1D-43A0A0B4J1Z2 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
IGKV1D-43A0A0B4J1Z2 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
IGKV1D-43A0A0B4J1Z2 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
IGKV1D-43A0A0B4J1Z2 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
IGKV1D-43A0A0B4J1Z2 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
IGKV1D-43A0A0B4J1Z2 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.26■□□□□ 0.35
IGKV1D-43A0A0B4J1Z2 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
IGKV1D-43A0A0B4J1Z2 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
IGKV1D-43A0A0B4J1Z2 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
IGKV1D-43A0A0B4J1Z2 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
IGKV1D-43A0A0B4J1Z2 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
IGKV1D-43A0A0B4J1Z2 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.26■□□□□ 0.35
IGKV1D-43A0A0B4J1Z2 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
IGKV1D-43A0A0B4J1Z2 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
IGKV1D-43A0A0B4J1Z2 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.26■□□□□ 0.35
IGKV1D-43A0A0B4J1Z2 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
IGKV1D-43A0A0B4J1Z2 AC233263.1-201ENST00000578059 224 ntBASIC17.26■□□□□ 0.35
IGKV1D-43A0A0B4J1Z2 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
IGKV1D-43A0A0B4J1Z2 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.26■□□□□ 0.35
IGKV1D-43A0A0B4J1Z2 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
IGKV1D-43A0A0B4J1Z2 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
IGKV1D-43A0A0B4J1Z2 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
IGKV1D-43A0A0B4J1Z2 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
IGKV1D-43A0A0B4J1Z2 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
IGKV1D-43A0A0B4J1Z2 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
IGKV1D-43A0A0B4J1Z2 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
IGKV1D-43A0A0B4J1Z2 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.26■□□□□ 0.35
IGKV1D-43A0A0B4J1Z2 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
IGKV1D-43A0A0B4J1Z2 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
IGKV1D-43A0A0B4J1Z2 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
IGKV1D-43A0A0B4J1Z2 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
IGKV1D-43A0A0B4J1Z2 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.25■□□□□ 0.35
IGKV1D-43A0A0B4J1Z2 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.25■□□□□ 0.35
IGKV1D-43A0A0B4J1Z2 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
IGKV1D-43A0A0B4J1Z2 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.25■□□□□ 0.35
IGKV1D-43A0A0B4J1Z2 AC098818.2-201ENST00000564925 2320 ntBASIC17.25■□□□□ 0.35
IGKV1D-43A0A0B4J1Z2 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
IGKV1D-43A0A0B4J1Z2 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
IGKV1D-43A0A0B4J1Z2 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IGKV1D-43A0A0B4J1Z2 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
IGKV1D-43A0A0B4J1Z2 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IGKV1D-43A0A0B4J1Z2 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
IGKV1D-43A0A0B4J1Z2 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
IGKV1D-43A0A0B4J1Z2 YBX1P10-201ENST00000444752 975 ntBASIC17.25■□□□□ 0.35
IGKV1D-43A0A0B4J1Z2 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
IGKV1D-43A0A0B4J1Z2 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.25■□□□□ 0.35
IGKV1D-43A0A0B4J1Z2 AP003097.1-201ENST00000530657 1135 ntBASIC17.25■□□□□ 0.35
IGKV1D-43A0A0B4J1Z2 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms