Protein–RNA interactions for Protein: A0A087WT02

TRAV9-2, T-cell receptor alpha variable 9-2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-2A0A087WT02 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC14.54□□□□□ -0.08
TRAV9-2A0A087WT02 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC14.54□□□□□ -0.08
TRAV9-2A0A087WT02 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV9-2A0A087WT02 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV9-2A0A087WT02 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC14.54□□□□□ -0.08
TRAV9-2A0A087WT02 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV9-2A0A087WT02 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV9-2A0A087WT02 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV9-2A0A087WT02 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC14.54□□□□□ -0.08
TRAV9-2A0A087WT02 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
TRAV9-2A0A087WT02 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV9-2A0A087WT02 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
TRAV9-2A0A087WT02 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV9-2A0A087WT02 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
TRAV9-2A0A087WT02 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV9-2A0A087WT02 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV9-2A0A087WT02 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV9-2A0A087WT02 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV9-2A0A087WT02 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV9-2A0A087WT02 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV9-2A0A087WT02 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV9-2A0A087WT02 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV9-2A0A087WT02 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC14.53□□□□□ -0.08
TRAV9-2A0A087WT02 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
TRAV9-2A0A087WT02 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
TRAV9-2A0A087WT02 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
TRAV9-2A0A087WT02 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV9-2A0A087WT02 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
TRAV9-2A0A087WT02 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV9-2A0A087WT02 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC14.53□□□□□ -0.08
TRAV9-2A0A087WT02 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV9-2A0A087WT02 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC14.53□□□□□ -0.08
TRAV9-2A0A087WT02 DUX4L2-201ENST00000561772 1275 ntBASIC14.53□□□□□ -0.08
TRAV9-2A0A087WT02 GALNS-213ENST00000569433 723 ntTSL 3 BASIC14.53□□□□□ -0.08
TRAV9-2A0A087WT02 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC14.53□□□□□ -0.08
TRAV9-2A0A087WT02 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC14.53□□□□□ -0.08
TRAV9-2A0A087WT02 DUX4L6-201ENST00000626483 1275 ntBASIC14.53□□□□□ -0.08
TRAV9-2A0A087WT02 DUX4L1-201ENST00000627662 1275 ntBASIC14.53□□□□□ -0.08
TRAV9-2A0A087WT02 DUX4L8-201ENST00000629013 1275 ntBASIC14.53□□□□□ -0.08
TRAV9-2A0A087WT02 DUX4L3-201ENST00000630187 1275 ntBASIC14.53□□□□□ -0.08
TRAV9-2A0A087WT02 DUX4L7-201ENST00000630678 1275 ntBASIC14.53□□□□□ -0.08
TRAV9-2A0A087WT02 DUX4L5-201ENST00000630834 1275 ntBASIC14.53□□□□□ -0.08
TRAV9-2A0A087WT02 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV9-2A0A087WT02 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
TRAV9-2A0A087WT02 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
TRAV9-2A0A087WT02 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
TRAV9-2A0A087WT02 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC14.52□□□□□ -0.08
TRAV9-2A0A087WT02 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV9-2A0A087WT02 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC14.52□□□□□ -0.08
TRAV9-2A0A087WT02 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
TRAV9-2A0A087WT02 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
TRAV9-2A0A087WT02 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
TRAV9-2A0A087WT02 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV9-2A0A087WT02 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.08
TRAV9-2A0A087WT02 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV9-2A0A087WT02 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV9-2A0A087WT02 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV9-2A0A087WT02 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV9-2A0A087WT02 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
TRAV9-2A0A087WT02 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC14.52□□□□□ -0.09
TRAV9-2A0A087WT02 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC14.52□□□□□ -0.09
TRAV9-2A0A087WT02 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC14.52□□□□□ -0.09
TRAV9-2A0A087WT02 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV9-2A0A087WT02 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC14.52□□□□□ -0.09
TRAV9-2A0A087WT02 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC14.52□□□□□ -0.09
TRAV9-2A0A087WT02 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV9-2A0A087WT02 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC14.52□□□□□ -0.09
TRAV9-2A0A087WT02 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
TRAV9-2A0A087WT02 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC14.52□□□□□ -0.09
TRAV9-2A0A087WT02 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC14.52□□□□□ -0.09
TRAV9-2A0A087WT02 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV9-2A0A087WT02 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV9-2A0A087WT02 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV9-2A0A087WT02 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV9-2A0A087WT02 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV9-2A0A087WT02 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV9-2A0A087WT02 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV9-2A0A087WT02 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC14.52□□□□□ -0.09
TRAV9-2A0A087WT02 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC14.52□□□□□ -0.09
TRAV9-2A0A087WT02 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC14.52□□□□□ -0.09
TRAV9-2A0A087WT02 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV9-2A0A087WT02 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
TRAV9-2A0A087WT02 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
TRAV9-2A0A087WT02 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV9-2A0A087WT02 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV9-2A0A087WT02 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
TRAV9-2A0A087WT02 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV9-2A0A087WT02 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV9-2A0A087WT02 KRT87P-202ENST00000534226 1464 ntBASIC14.51□□□□□ -0.09
TRAV9-2A0A087WT02 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV9-2A0A087WT02 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV9-2A0A087WT02 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV9-2A0A087WT02 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV9-2A0A087WT02 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC14.51□□□□□ -0.09
TRAV9-2A0A087WT02 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
TRAV9-2A0A087WT02 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC14.51□□□□□ -0.09
TRAV9-2A0A087WT02 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC14.51□□□□□ -0.09
TRAV9-2A0A087WT02 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
TRAV9-2A0A087WT02 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV9-2A0A087WT02 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms