Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 CIT-201ENST00000261833 8578 ntAPPRIS P3 TSL 1 (best) BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 TMSB10P2-201ENST00000416049 131 ntBASIC1.98□□□□□ -2.09
MACF1Q9UPN3 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 AC108463.1-201ENST00000450258 347 ntBASIC1.98□□□□□ -2.09
MACF1Q9UPN3 RN7SL165P-201ENST00000477476 291 ntBASIC1.98□□□□□ -2.09
MACF1Q9UPN3 RPL7P41-201ENST00000485823 957 ntBASIC1.98□□□□□ -2.09
MACF1Q9UPN3 GLUD1P3-202ENST00000508551 200 ntBASIC1.98□□□□□ -2.09
MACF1Q9UPN3 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 AL110115.1-201ENST00000614396 364 ntBASIC1.98□□□□□ -2.09
MACF1Q9UPN3 CASC22-202ENST00000628396 802 ntTSL 5 BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 GTF2A1-203ENST00000553612 6306 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 SPTB-208ENST00000556626 10153 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 AP001284.1-201ENST00000528393 2118 ntBASIC1.98□□□□□ -2.09
MACF1Q9UPN3 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 NPL-201ENST00000258317 2461 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 AC083899.2-201ENST00000423285 1376 ntBASIC1.98□□□□□ -2.09
MACF1Q9UPN3 MITF-203ENST00000328528 4680 ntTSL 5 BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 RNU1-74P-201ENST00000384108 171 ntBASIC1.98□□□□□ -2.09
MACF1Q9UPN3 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 BX510359.1-201ENST00000456973 237 ntBASIC1.98□□□□□ -2.09
MACF1Q9UPN3 AC010350.1-201ENST00000504908 231 ntBASIC1.98□□□□□ -2.09
MACF1Q9UPN3 AC095057.1-201ENST00000507583 168 ntBASIC1.98□□□□□ -2.09
MACF1Q9UPN3 OR5AM1P-201ENST00000532136 1032 ntBASIC1.98□□□□□ -2.09
MACF1Q9UPN3 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 AC013731.1-201ENST00000604340 883 ntBASIC1.98□□□□□ -2.09
MACF1Q9UPN3 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 AGAP1-212ENST00000614409 9932 ntTSL 5 BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 FAM83F-201ENST00000333407 15561 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 DCN-218ENST00000551354 2924 ntTSL 3 BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 SNORA71.2-201ENST00000364941 134 ntBASIC1.98□□□□□ -2.09
MACF1Q9UPN3 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 AC119744.1-201ENST00000454746 1715 ntBASIC1.98□□□□□ -2.09
MACF1Q9UPN3 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 SHANK2-211ENST00000449833 8850 ntTSL 5 BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 CACNA1C-220ENST00000399655 13433 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 TRPM3-204ENST00000360823 5966 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 RPL32P28-201ENST00000443577 397 ntBASIC1.98□□□□□ -2.09
MACF1Q9UPN3 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 NPM1P39-201ENST00000449818 867 ntBASIC1.98□□□□□ -2.09
MACF1Q9UPN3 GAPDHP36-201ENST00000480688 918 ntBASIC1.98□□□□□ -2.09
MACF1Q9UPN3 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 RNU1-6P-201ENST00000516290 144 ntBASIC1.98□□□□□ -2.09
MACF1Q9UPN3 AP001207.2-201ENST00000519490 539 ntBASIC1.98□□□□□ -2.09
MACF1Q9UPN3 NAT2-202ENST00000520116 716 ntTSL 3 BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 FTLP6-201ENST00000355274 422 ntBASIC1.98□□□□□ -2.09
MACF1Q9UPN3 RPL7P2-201ENST00000427639 268 ntBASIC1.98□□□□□ -2.09
MACF1Q9UPN3 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 MIR3651-201ENST00000630427 90 ntBASIC1.98□□□□□ -2.09
MACF1Q9UPN3 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 APBB2-201ENST00000295974 8972 ntAPPRIS ALT1 TSL 2 BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 166.1 ms