Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
COL22A1Q8NFW1 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
COL22A1Q8NFW1 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
COL22A1Q8NFW1 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
COL22A1Q8NFW1 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
COL22A1Q8NFW1 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
COL22A1Q8NFW1 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC6.55□□□□□ -1.36
COL22A1Q8NFW1 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
COL22A1Q8NFW1 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
COL22A1Q8NFW1 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
COL22A1Q8NFW1 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
COL22A1Q8NFW1 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
COL22A1Q8NFW1 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
COL22A1Q8NFW1 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
COL22A1Q8NFW1 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
COL22A1Q8NFW1 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
COL22A1Q8NFW1 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
COL22A1Q8NFW1 AP001324.1-201ENST00000428553 399 ntBASIC6.54□□□□□ -1.36
COL22A1Q8NFW1 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC6.54□□□□□ -1.36
COL22A1Q8NFW1 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC6.54□□□□□ -1.36
COL22A1Q8NFW1 YWHAZP2-201ENST00000440317 728 ntBASIC6.54□□□□□ -1.36
COL22A1Q8NFW1 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC6.54□□□□□ -1.36
COL22A1Q8NFW1 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC6.54□□□□□ -1.36
COL22A1Q8NFW1 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC6.54□□□□□ -1.36
COL22A1Q8NFW1 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.54□□□□□ -1.36
COL22A1Q8NFW1 AC022726.1-201ENST00000587475 207 ntBASIC6.54□□□□□ -1.36
COL22A1Q8NFW1 AC006133.1-201ENST00000617106 264 ntBASIC6.54□□□□□ -1.36
COL22A1Q8NFW1 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
COL22A1Q8NFW1 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
COL22A1Q8NFW1 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC6.54□□□□□ -1.36
COL22A1Q8NFW1 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.54□□□□□ -1.36
COL22A1Q8NFW1 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
COL22A1Q8NFW1 ZFRP1-201ENST00000457579 2970 ntBASIC6.54□□□□□ -1.36
COL22A1Q8NFW1 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
COL22A1Q8NFW1 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
COL22A1Q8NFW1 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.54□□□□□ -1.36
COL22A1Q8NFW1 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
COL22A1Q8NFW1 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
COL22A1Q8NFW1 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
COL22A1Q8NFW1 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
COL22A1Q8NFW1 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
COL22A1Q8NFW1 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC6.54□□□□□ -1.36
COL22A1Q8NFW1 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
COL22A1Q8NFW1 RNA5SP223-201ENST00000365174 120 ntBASIC6.54□□□□□ -1.36
COL22A1Q8NFW1 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC6.54□□□□□ -1.36
COL22A1Q8NFW1 RNU6ATAC5P-201ENST00000388104 126 ntBASIC6.54□□□□□ -1.36
COL22A1Q8NFW1 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
COL22A1Q8NFW1 AL358176.3-201ENST00000420757 454 ntBASIC6.54□□□□□ -1.36
COL22A1Q8NFW1 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC6.54□□□□□ -1.36
COL22A1Q8NFW1 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC6.54□□□□□ -1.36
COL22A1Q8NFW1 RNU6ATAC28P-201ENST00000459249 118 ntBASIC6.54□□□□□ -1.36
COL22A1Q8NFW1 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC6.54□□□□□ -1.36
COL22A1Q8NFW1 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC6.54□□□□□ -1.36
COL22A1Q8NFW1 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.54□□□□□ -1.36
COL22A1Q8NFW1 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.54□□□□□ -1.36
COL22A1Q8NFW1 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC6.54□□□□□ -1.36
COL22A1Q8NFW1 AC006130.2-201ENST00000586202 326 ntBASIC6.54□□□□□ -1.36
COL22A1Q8NFW1 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC6.54□□□□□ -1.36
COL22A1Q8NFW1 LDHA-225ENST00000625635 141 ntTSL 5 BASIC6.54□□□□□ -1.36
COL22A1Q8NFW1 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
COL22A1Q8NFW1 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
COL22A1Q8NFW1 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
COL22A1Q8NFW1 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
COL22A1Q8NFW1 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
COL22A1Q8NFW1 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
COL22A1Q8NFW1 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC6.53□□□□□ -1.36
COL22A1Q8NFW1 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
COL22A1Q8NFW1 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.53□□□□□ -1.36
COL22A1Q8NFW1 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
COL22A1Q8NFW1 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
COL22A1Q8NFW1 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
COL22A1Q8NFW1 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC6.53□□□□□ -1.36
COL22A1Q8NFW1 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
COL22A1Q8NFW1 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
COL22A1Q8NFW1 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC6.53□□□□□ -1.36
COL22A1Q8NFW1 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.53□□□□□ -1.36
COL22A1Q8NFW1 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
COL22A1Q8NFW1 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
COL22A1Q8NFW1 RNU11-201ENST00000387069 134 ntBASIC6.53□□□□□ -1.36
COL22A1Q8NFW1 AL390316.1-201ENST00000406279 553 ntBASIC6.53□□□□□ -1.36
COL22A1Q8NFW1 AC021876.1-201ENST00000425959 359 ntBASIC6.53□□□□□ -1.36
COL22A1Q8NFW1 AC009238.2-201ENST00000431026 355 ntBASIC6.53□□□□□ -1.36
COL22A1Q8NFW1 NDUFB4P8-201ENST00000435351 367 ntBASIC6.53□□□□□ -1.36
COL22A1Q8NFW1 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
COL22A1Q8NFW1 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC6.53□□□□□ -1.36
COL22A1Q8NFW1 AL360012.1-201ENST00000602813 131 ntBASIC6.53□□□□□ -1.36
COL22A1Q8NFW1 AC005618.4-201ENST00000625053 554 ntBASIC6.53□□□□□ -1.36
COL22A1Q8NFW1 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
COL22A1Q8NFW1 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
COL22A1Q8NFW1 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
COL22A1Q8NFW1 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
COL22A1Q8NFW1 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
COL22A1Q8NFW1 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
COL22A1Q8NFW1 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.53□□□□□ -1.36
COL22A1Q8NFW1 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.36
COL22A1Q8NFW1 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
COL22A1Q8NFW1 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
COL22A1Q8NFW1 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
COL22A1Q8NFW1 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
COL22A1Q8NFW1 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms