Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
BEST2Q8NFU1 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
BEST2Q8NFU1 RNU1-146P-201ENST00000364015 165 ntBASIC5.69□□□□□ -1.5
BEST2Q8NFU1 RN7SKP153-201ENST00000365026 316 ntBASIC5.69□□□□□ -1.5
BEST2Q8NFU1 CCNB2P1-201ENST00000399411 1150 ntBASIC5.69□□□□□ -1.5
BEST2Q8NFU1 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.69□□□□□ -1.5
BEST2Q8NFU1 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.69□□□□□ -1.5
BEST2Q8NFU1 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.69□□□□□ -1.5
BEST2Q8NFU1 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.69□□□□□ -1.5
BEST2Q8NFU1 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.69□□□□□ -1.5
BEST2Q8NFU1 TRIM60P17-201ENST00000415181 719 ntBASIC5.69□□□□□ -1.5
BEST2Q8NFU1 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.69□□□□□ -1.5
BEST2Q8NFU1 RPS27AP6-201ENST00000427962 448 ntBASIC5.69□□□□□ -1.5
BEST2Q8NFU1 AC124944.2-201ENST00000429866 1242 ntBASIC5.69□□□□□ -1.5
BEST2Q8NFU1 AL353718.1-201ENST00000451028 517 ntBASIC5.69□□□□□ -1.5
BEST2Q8NFU1 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.69□□□□□ -1.5
BEST2Q8NFU1 RN7SL826P-201ENST00000479724 288 ntBASIC5.69□□□□□ -1.5
BEST2Q8NFU1 RPSAP50-201ENST00000481955 852 ntBASIC5.69□□□□□ -1.5
BEST2Q8NFU1 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC5.69□□□□□ -1.5
BEST2Q8NFU1 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.69□□□□□ -1.5
BEST2Q8NFU1 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.69□□□□□ -1.5
BEST2Q8NFU1 SNORA70.11-201ENST00000515987 138 ntBASIC5.69□□□□□ -1.5
BEST2Q8NFU1 SNORA70.13-201ENST00000516116 138 ntBASIC5.69□□□□□ -1.5
BEST2Q8NFU1 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.69□□□□□ -1.5
BEST2Q8NFU1 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC5.69□□□□□ -1.5
BEST2Q8NFU1 OR4R2P-201ENST00000530815 597 ntBASIC5.69□□□□□ -1.5
BEST2Q8NFU1 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
BEST2Q8NFU1 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.69□□□□□ -1.5
BEST2Q8NFU1 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.69□□□□□ -1.5
BEST2Q8NFU1 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
BEST2Q8NFU1 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.69□□□□□ -1.5
BEST2Q8NFU1 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.69□□□□□ -1.5
BEST2Q8NFU1 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.69□□□□□ -1.5
BEST2Q8NFU1 AC008536.1-201ENST00000602872 669 ntBASIC5.69□□□□□ -1.5
BEST2Q8NFU1 AC009597.2-201ENST00000604659 592 ntBASIC5.69□□□□□ -1.5
BEST2Q8NFU1 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.69□□□□□ -1.5
BEST2Q8NFU1 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC5.69□□□□□ -1.5
BEST2Q8NFU1 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
BEST2Q8NFU1 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.69□□□□□ -1.5
BEST2Q8NFU1 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
BEST2Q8NFU1 ADAM24P-201ENST00000398655 2101 ntBASIC5.69□□□□□ -1.5
BEST2Q8NFU1 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
BEST2Q8NFU1 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.69□□□□□ -1.5
BEST2Q8NFU1 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
BEST2Q8NFU1 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.69□□□□□ -1.5
BEST2Q8NFU1 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
BEST2Q8NFU1 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
BEST2Q8NFU1 AL034549.2-201ENST00000618285 3373 ntBASIC5.69□□□□□ -1.5
BEST2Q8NFU1 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.68□□□□□ -1.5
BEST2Q8NFU1 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
BEST2Q8NFU1 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.68□□□□□ -1.5
BEST2Q8NFU1 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.68□□□□□ -1.5
BEST2Q8NFU1 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.68□□□□□ -1.5
BEST2Q8NFU1 AC005261.6-201ENST00000623072 1387 ntBASIC5.68□□□□□ -1.5
BEST2Q8NFU1 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
BEST2Q8NFU1 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
BEST2Q8NFU1 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
BEST2Q8NFU1 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.68□□□□□ -1.5
BEST2Q8NFU1 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
BEST2Q8NFU1 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
BEST2Q8NFU1 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
BEST2Q8NFU1 SNORA5.1-201ENST00000384275 131 ntBASIC5.68□□□□□ -1.5
BEST2Q8NFU1 OR8V1P-201ENST00000395193 873 ntBASIC5.68□□□□□ -1.5
BEST2Q8NFU1 U3.36-201ENST00000408418 213 ntBASIC5.68□□□□□ -1.5
BEST2Q8NFU1 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
BEST2Q8NFU1 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.68□□□□□ -1.5
BEST2Q8NFU1 CLUHP1-201ENST00000435012 1190 ntBASIC5.68□□□□□ -1.5
BEST2Q8NFU1 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.68□□□□□ -1.5
BEST2Q8NFU1 OTX2P1-201ENST00000450956 354 ntBASIC5.68□□□□□ -1.5
BEST2Q8NFU1 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC5.68□□□□□ -1.5
BEST2Q8NFU1 AC009127.1-201ENST00000467090 155 ntBASIC5.68□□□□□ -1.5
BEST2Q8NFU1 RPL7AP6-201ENST00000477943 801 ntBASIC5.68□□□□□ -1.5
BEST2Q8NFU1 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.68□□□□□ -1.5
BEST2Q8NFU1 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.68□□□□□ -1.5
BEST2Q8NFU1 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.68□□□□□ -1.5
BEST2Q8NFU1 PCNAP1-201ENST00000505363 709 ntBASIC5.68□□□□□ -1.5
BEST2Q8NFU1 MTND3P24-201ENST00000506306 329 ntBASIC5.68□□□□□ -1.5
BEST2Q8NFU1 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.68□□□□□ -1.5
BEST2Q8NFU1 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
BEST2Q8NFU1 AC112206.4-201ENST00000515142 405 ntBASIC5.68□□□□□ -1.5
BEST2Q8NFU1 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.68□□□□□ -1.5
BEST2Q8NFU1 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC5.68□□□□□ -1.5
BEST2Q8NFU1 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.68□□□□□ -1.5
BEST2Q8NFU1 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.68□□□□□ -1.5
BEST2Q8NFU1 RN7SL708P-201ENST00000580952 299 ntBASIC5.68□□□□□ -1.5
BEST2Q8NFU1 AC006116.3-201ENST00000592968 361 ntBASIC5.68□□□□□ -1.5
BEST2Q8NFU1 AC016542.1-201ENST00000608259 493 ntBASIC5.68□□□□□ -1.5
BEST2Q8NFU1 AL356608.1-201ENST00000610034 820 ntBASIC5.68□□□□□ -1.5
BEST2Q8NFU1 AC253576.2-201ENST00000618815 580 ntBASIC5.68□□□□□ -1.5
BEST2Q8NFU1 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.68□□□□□ -1.5
BEST2Q8NFU1 LINC01739-205ENST00000641890 573 ntBASIC5.68□□□□□ -1.5
BEST2Q8NFU1 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
BEST2Q8NFU1 CR382285.2-201ENST00000624662 1495 ntBASIC5.68□□□□□ -1.5
BEST2Q8NFU1 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.68□□□□□ -1.5
BEST2Q8NFU1 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
BEST2Q8NFU1 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
BEST2Q8NFU1 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
BEST2Q8NFU1 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.68□□□□□ -1.5
BEST2Q8NFU1 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.68□□□□□ -1.5
BEST2Q8NFU1 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms