Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 MIR1264-201ENST00000616374 69 ntBASIC4.91□□□□□ -1.62
SCN1BQ07699 AC245014.3-201ENST00000618589 347 ntBASIC4.91□□□□□ -1.62
SCN1BQ07699 AC048341.3-201ENST00000619323 491 ntBASIC4.91□□□□□ -1.62
SCN1BQ07699 AC010435.1-201ENST00000623353 1177 ntBASIC4.91□□□□□ -1.62
SCN1BQ07699 AC111152.1-202ENST00000635848 339 ntBASIC4.91□□□□□ -1.62
SCN1BQ07699 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.91□□□□□ -1.62
SCN1BQ07699 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC4.91□□□□□ -1.62
SCN1BQ07699 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
SCN1BQ07699 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.91□□□□□ -1.62
SCN1BQ07699 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
SCN1BQ07699 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SCN1BQ07699 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SCN1BQ07699 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SCN1BQ07699 AC091305.2-201ENST00000624049 1576 ntBASIC4.91□□□□□ -1.62
SCN1BQ07699 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SCN1BQ07699 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
SCN1BQ07699 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
SCN1BQ07699 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.9□□□□□ -1.62
SCN1BQ07699 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
SCN1BQ07699 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.9□□□□□ -1.62
SCN1BQ07699 AC104966.1-201ENST00000467010 1464 ntBASIC4.9□□□□□ -1.62
SCN1BQ07699 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SCN1BQ07699 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SCN1BQ07699 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SCN1BQ07699 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4.9□□□□□ -1.63
SCN1BQ07699 RNA5SP326-201ENST00000363209 110 ntBASIC4.9□□□□□ -1.63
SCN1BQ07699 TRGV6-201ENST00000417928 299 ntBASIC4.9□□□□□ -1.63
SCN1BQ07699 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC4.9□□□□□ -1.63
SCN1BQ07699 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC4.9□□□□□ -1.63
SCN1BQ07699 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC4.9□□□□□ -1.63
SCN1BQ07699 AC126120.1-201ENST00000431082 470 ntBASIC4.9□□□□□ -1.63
SCN1BQ07699 AL035458.1-201ENST00000433096 585 ntBASIC4.9□□□□□ -1.63
SCN1BQ07699 PTP4A1P3-201ENST00000433661 420 ntBASIC4.9□□□□□ -1.63
SCN1BQ07699 RPL19P16-201ENST00000433839 588 ntBASIC4.9□□□□□ -1.63
SCN1BQ07699 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SCN1BQ07699 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.9□□□□□ -1.63
SCN1BQ07699 AMYP1-201ENST00000440059 1023 ntBASIC4.9□□□□□ -1.63
SCN1BQ07699 CYCSP24-201ENST00000445119 316 ntBASIC4.9□□□□□ -1.63
SCN1BQ07699 IGBP1P3-201ENST00000447449 1000 ntBASIC4.9□□□□□ -1.63
SCN1BQ07699 MTND2P30-201ENST00000456663 382 ntBASIC4.9□□□□□ -1.63
SCN1BQ07699 RPS20P4-201ENST00000461659 355 ntBASIC4.9□□□□□ -1.63
SCN1BQ07699 AC104339.1-201ENST00000465478 348 ntBASIC4.9□□□□□ -1.63
SCN1BQ07699 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC4.9□□□□□ -1.63
SCN1BQ07699 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.9□□□□□ -1.63
SCN1BQ07699 APOBEC3AP1-201ENST00000511396 287 ntBASIC4.9□□□□□ -1.63
SCN1BQ07699 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC4.9□□□□□ -1.63
SCN1BQ07699 PRMT5P1-201ENST00000514351 598 ntBASIC4.9□□□□□ -1.63
SCN1BQ07699 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC4.9□□□□□ -1.63
SCN1BQ07699 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC4.9□□□□□ -1.63
SCN1BQ07699 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SCN1BQ07699 RPA2P1-201ENST00000556557 721 ntBASIC4.9□□□□□ -1.63
SCN1BQ07699 AL845552.1-201ENST00000556820 323 ntBASIC4.9□□□□□ -1.63
SCN1BQ07699 RBM22P12-201ENST00000567098 1255 ntBASIC4.9□□□□□ -1.63
SCN1BQ07699 OR1E3-201ENST00000575608 948 ntBASIC4.9□□□□□ -1.63
SCN1BQ07699 AC005244.1-201ENST00000582566 339 ntBASIC4.9□□□□□ -1.63
SCN1BQ07699 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.9□□□□□ -1.63
SCN1BQ07699 FAM27E4-201ENST00000605259 342 ntBASIC4.9□□□□□ -1.63
SCN1BQ07699 AL683826.1-201ENST00000624104 627 ntBASIC4.9□□□□□ -1.63
SCN1BQ07699 AP001962.1-201ENST00000624114 559 ntBASIC4.9□□□□□ -1.63
SCN1BQ07699 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC4.9□□□□□ -1.63
SCN1BQ07699 TEX41-293ENST00000630451 690 ntTSL 5 BASIC4.9□□□□□ -1.63
SCN1BQ07699 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SCN1BQ07699 DDX18P4-201ENST00000511690 1966 ntBASIC4.9□□□□□ -1.63
SCN1BQ07699 AC005332.5-201ENST00000591222 2919 ntBASIC4.9□□□□□ -1.63
SCN1BQ07699 QRSL1P1-201ENST00000400977 1540 ntBASIC4.9□□□□□ -1.63
SCN1BQ07699 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC4.9□□□□□ -1.63
SCN1BQ07699 NEAT1-202ENST00000501122 22743 ntBASIC4.9□□□□□ -1.63
SCN1BQ07699 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
SCN1BQ07699 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.63
SCN1BQ07699 CASC19-248ENST00000641674 1356 ntBASIC4.9□□□□□ -1.63
SCN1BQ07699 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SCN1BQ07699 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SCN1BQ07699 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SCN1BQ07699 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC4.89□□□□□ -1.63
SCN1BQ07699 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SCN1BQ07699 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.89□□□□□ -1.63
SCN1BQ07699 AC100778.3-201ENST00000580060 1750 ntBASIC4.89□□□□□ -1.63
SCN1BQ07699 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SCN1BQ07699 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC4.89□□□□□ -1.63
SCN1BQ07699 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
SCN1BQ07699 COX6B1P3-201ENST00000312310 260 ntBASIC4.89□□□□□ -1.63
SCN1BQ07699 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SCN1BQ07699 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SCN1BQ07699 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SCN1BQ07699 FIG4-202ENST00000368941 791 ntTSL 3 BASIC4.89□□□□□ -1.63
SCN1BQ07699 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SCN1BQ07699 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC4.89□□□□□ -1.63
SCN1BQ07699 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.89□□□□□ -1.63
SCN1BQ07699 OOSP1-201ENST00000398992 1270 ntBASIC4.89□□□□□ -1.63
SCN1BQ07699 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SCN1BQ07699 MIR1275-201ENST00000408770 80 ntBASIC4.89□□□□□ -1.63
SCN1BQ07699 RNU2-17P-201ENST00000410290 190 ntBASIC4.89□□□□□ -1.63
SCN1BQ07699 XKRYP4-201ENST00000414395 483 ntBASIC4.89□□□□□ -1.63
SCN1BQ07699 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.89□□□□□ -1.63
SCN1BQ07699 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.89□□□□□ -1.63
SCN1BQ07699 MTCO3P4-201ENST00000419236 787 ntBASIC4.89□□□□□ -1.63
SCN1BQ07699 RIMKLBP2-201ENST00000424737 654 ntBASIC4.89□□□□□ -1.63
SCN1BQ07699 NANOGP4-201ENST00000427230 913 ntBASIC4.89□□□□□ -1.63
SCN1BQ07699 FO393419.3-201ENST00000428741 282 ntBASIC4.89□□□□□ -1.63
SCN1BQ07699 AC073508.1-201ENST00000428866 656 ntBASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms