Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC5.96□□□□□ -1.46
GFRA1P56159 RPL7P59-201ENST00000447700 943 ntBASIC5.96□□□□□ -1.46
GFRA1P56159 TVP23CP1-201ENST00000450317 639 ntBASIC5.96□□□□□ -1.46
GFRA1P56159 SSXP1-201ENST00000453640 473 ntBASIC5.96□□□□□ -1.46
GFRA1P56159 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
GFRA1P56159 DNAJC19P1-201ENST00000455312 319 ntBASIC5.96□□□□□ -1.46
GFRA1P56159 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.96□□□□□ -1.46
GFRA1P56159 RPS7P10-201ENST00000464254 603 ntBASIC5.96□□□□□ -1.46
GFRA1P56159 AC005165.2-201ENST00000466070 380 ntBASIC5.96□□□□□ -1.46
GFRA1P56159 RPL23AP71-201ENST00000470966 469 ntBASIC5.96□□□□□ -1.46
GFRA1P56159 RPL9P33-201ENST00000484311 566 ntBASIC5.96□□□□□ -1.46
GFRA1P56159 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC5.96□□□□□ -1.46
GFRA1P56159 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC5.96□□□□□ -1.46
GFRA1P56159 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
GFRA1P56159 SCARNA5-201ENST00000516201 276 ntBASIC5.96□□□□□ -1.46
GFRA1P56159 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC5.96□□□□□ -1.46
GFRA1P56159 COX6B1P6-201ENST00000522347 255 ntBASIC5.96□□□□□ -1.46
GFRA1P56159 AP003392.2-201ENST00000527269 208 ntBASIC5.96□□□□□ -1.46
GFRA1P56159 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC5.96□□□□□ -1.46
GFRA1P56159 DPPA3P2-201ENST00000553589 478 ntBASIC5.96□□□□□ -1.46
GFRA1P56159 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC5.96□□□□□ -1.46
GFRA1P56159 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC5.96□□□□□ -1.46
GFRA1P56159 AC136619.2-201ENST00000563361 631 ntBASIC5.96□□□□□ -1.46
GFRA1P56159 AC138915.2-201ENST00000569776 97 ntBASIC5.96□□□□□ -1.46
GFRA1P56159 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
GFRA1P56159 AC091805.2-201ENST00000603848 235 ntBASIC5.96□□□□□ -1.46
GFRA1P56159 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC5.96□□□□□ -1.46
GFRA1P56159 AC234782.5-201ENST00000617723 324 ntBASIC5.96□□□□□ -1.46
GFRA1P56159 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
GFRA1P56159 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC5.96□□□□□ -1.46
GFRA1P56159 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.96□□□□□ -1.46
GFRA1P56159 AC073488.9-201ENST00000631601 754 ntBASIC5.96□□□□□ -1.46
GFRA1P56159 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
GFRA1P56159 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
GFRA1P56159 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.96□□□□□ -1.46
GFRA1P56159 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
GFRA1P56159 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
GFRA1P56159 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
GFRA1P56159 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
GFRA1P56159 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
GFRA1P56159 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
GFRA1P56159 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.46
GFRA1P56159 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
GFRA1P56159 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.96□□□□□ -1.46
GFRA1P56159 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
GFRA1P56159 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
GFRA1P56159 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
GFRA1P56159 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
GFRA1P56159 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
GFRA1P56159 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
GFRA1P56159 CEACAM20-205ENST00000620096 1494 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
GFRA1P56159 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC5.96□□□□□ -1.46
GFRA1P56159 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
GFRA1P56159 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
GFRA1P56159 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC5.95□□□□□ -1.46
GFRA1P56159 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
GFRA1P56159 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
GFRA1P56159 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
GFRA1P56159 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
GFRA1P56159 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
GFRA1P56159 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC5.95□□□□□ -1.46
GFRA1P56159 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
GFRA1P56159 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
GFRA1P56159 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC5.95□□□□□ -1.46
GFRA1P56159 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
GFRA1P56159 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
GFRA1P56159 AC007485.2-201ENST00000623493 1667 ntBASIC5.95□□□□□ -1.46
GFRA1P56159 ASNSP1-204ENST00000641977 1664 ntBASIC5.95□□□□□ -1.46
GFRA1P56159 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
GFRA1P56159 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC5.95□□□□□ -1.46
GFRA1P56159 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC5.95□□□□□ -1.46
GFRA1P56159 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
GFRA1P56159 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
GFRA1P56159 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
GFRA1P56159 RNU6-582P-201ENST00000362989 107 ntBASIC5.95□□□□□ -1.46
GFRA1P56159 RNU6-492P-201ENST00000363035 104 ntBASIC5.95□□□□□ -1.46
GFRA1P56159 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
GFRA1P56159 SUGT1P1-201ENST00000379514 476 ntBASIC5.95□□□□□ -1.46
GFRA1P56159 SNORA75-201ENST00000384158 137 ntBASIC5.95□□□□□ -1.46
GFRA1P56159 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
GFRA1P56159 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC5.95□□□□□ -1.46
GFRA1P56159 AL512430.2-201ENST00000406786 339 ntBASIC5.95□□□□□ -1.46
GFRA1P56159 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC5.95□□□□□ -1.46
GFRA1P56159 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC5.95□□□□□ -1.46
GFRA1P56159 AK4P4-201ENST00000419465 646 ntBASIC5.95□□□□□ -1.46
GFRA1P56159 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC5.95□□□□□ -1.46
GFRA1P56159 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.95□□□□□ -1.46
GFRA1P56159 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.95□□□□□ -1.46
GFRA1P56159 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC5.95□□□□□ -1.46
GFRA1P56159 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC5.95□□□□□ -1.46
GFRA1P56159 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC5.95□□□□□ -1.46
GFRA1P56159 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC5.95□□□□□ -1.46
GFRA1P56159 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.95□□□□□ -1.46
GFRA1P56159 AC241584.1-201ENST00000438469 1241 ntBASIC5.95□□□□□ -1.46
GFRA1P56159 AL031667.1-201ENST00000440222 725 ntBASIC5.95□□□□□ -1.46
GFRA1P56159 AC245291.3-201ENST00000443400 292 ntBASIC5.95□□□□□ -1.46
GFRA1P56159 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC5.95□□□□□ -1.46
GFRA1P56159 AC023271.1-201ENST00000445936 1090 ntBASIC5.95□□□□□ -1.46
GFRA1P56159 AC108463.1-201ENST00000450258 347 ntBASIC5.95□□□□□ -1.46
GFRA1P56159 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms