RNA–Protein interactions for RNA: ENST00000453640.1

SSXP1-201, Transcript of SSX family pseudogene 1, humanhuman

BASIC

Gene SSXP1, Length 473 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP1-201ENST00000453640 AEBP2Q6ZN18 517 aaPredicted RBP22.82■■□□□ 1.24
SSXP1-201ENST00000453640 CHIC1Q5VXU3 224 aa22.08■■□□□ 1.13
SSXP1-201ENST00000453640 PHF23Q9BUL5 403 aaPredicted RBP19.45■□□□□ 0.7
SSXP1-201ENST00000453640 SENP3Q9H4L4 574 aaPredicted RBP19.29■□□□□ 0.68
SSXP1-201ENST00000453640 FOXD1Q16676 465 aa17.98■□□□□ 0.47
SSXP1-201ENST00000453640 PLPPR3Q6T4P5 718 aa17.82■□□□□ 0.44
SSXP1-201ENST00000453640 PPP6R1Q9UPN7 881 aa17.22■□□□□ 0.35
SSXP1-201ENST00000453640 ADRA2BP18089 450 aa17.18■□□□□ 0.34
SSXP1-201ENST00000453640 PIAS4Q8N2W9 510 aaPredicted RBP16.88■□□□□ 0.29
SSXP1-201ENST00000453640 MSH5O43196 834 aa16.57■□□□□ 0.24
SSXP1-201ENST00000453640 PPP4R3CPQ6ZMV5 832 aa15.71■□□□□ 0.11
SSXP1-201ENST00000453640 MAPK8IP2Q13387 824 aaPredicted RBP15.64■□□□□ 0.09
SSXP1-201ENST00000453640 SCAF1Q9H7N4 1312 aaKnown RBP15.61■□□□□ 0.09
SSXP1-201ENST00000453640 POTEDQ86YR6 584 aa15.42■□□□□ 0.06
SSXP1-201ENST00000453640 DMRT2Q9Y5R5 561 aa15.4■□□□□ 0.06
SSXP1-201ENST00000453640 CNKSR2Q8WXI2 1034 aa15.28■□□□□ 0.04
SSXP1-201ENST00000453640 KCNA4P22459 653 aa15.21■□□□□ 0.03
SSXP1-201ENST00000453640 NCBP3Q53F19 620 aaKnown RBP15.2■□□□□ 0.02
SSXP1-201ENST00000453640 NPM3O75607 178 aaKnown RBP15.05■□□□□ -0
SSXP1-201ENST00000453640 HOXD11P31277 338 aaPredicted RBP15.03■□□□□ -0
SSXP1-201ENST00000453640 RNF216Q9NWF9 866 aaPredicted RBP15.02■□□□□ -0
SSXP1-201ENST00000453640 DCAF8L1A6NGE4 600 aa14.71□□□□□ -0.05
SSXP1-201ENST00000453640 DNAJC5BQ9UF47 199 aa14.62□□□□□ -0.07
SSXP1-201ENST00000453640 SLC4A1APQ9BWU0 796 aaKnown RBP14.41□□□□□ -0.1
SSXP1-201ENST00000453640 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.29□□□□□ -0.12
SSXP1-201ENST00000453640 SLC4A2P04920 1241 aa14.28□□□□□ -0.12
SSXP1-201ENST00000453640 RNF39Q9H2S5 420 aa14.23□□□□□ -0.13
SSXP1-201ENST00000453640 U3KPZ7 1027 aaPredicted RBP14.1□□□□□ -0.15
SSXP1-201ENST00000453640 ZBTB22O15209 634 aa14.02□□□□□ -0.17
SSXP1-201ENST00000453640 C1QBPQ07021 282 aaKnown RBP14.01□□□□□ -0.17
SSXP1-201ENST00000453640 FOXD4L1Q9NU39 408 aa14□□□□□ -0.17
SSXP1-201ENST00000453640 CACNB1Q02641 598 aaPredicted RBP13.94□□□□□ -0.18
SSXP1-201ENST00000453640 MYCNP04198 464 aaPredicted RBP13.86□□□□□ -0.19
SSXP1-201ENST00000453640 EHMT2Q96KQ7 1210 aa13.84□□□□□ -0.19
SSXP1-201ENST00000453640 CSRNP3Q8WYN3 585 aa13.79□□□□□ -0.2
SSXP1-201ENST00000453640 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.76□□□□□ -0.21
SSXP1-201ENST00000453640 HNRNPUL2Q1KMD3 747 aaKnown RBP13.76□□□□□ -0.21
SSXP1-201ENST00000453640 SPINK5Q9NQ38 1064 aaPredicted RBP13.75□□□□□ -0.21
SSXP1-201ENST00000453640 SAMD1Q6SPF0 538 aaPredicted RBP13.73□□□□□ -0.21
SSXP1-201ENST00000453640 CAPN15O75808 1086 aa13.65□□□□□ -0.22
SSXP1-201ENST00000453640 APLP2Q06481 763 aa13.63□□□□□ -0.23
SSXP1-201ENST00000453640 ATF5Q9Y2D1 282 aaPredicted RBP13.59□□□□□ -0.23
SSXP1-201ENST00000453640 TRHP20396 242 aaPredicted RBP13.56□□□□□ -0.24
SSXP1-201ENST00000453640 ZNF219Q9P2Y4 722 aaPredicted RBP13.52□□□□□ -0.25
SSXP1-201ENST00000453640 ATXN8OSP0DMR3 200 aa13.5□□□□□ -0.25
SSXP1-201ENST00000453640 DSG3P32926 999 aa13.5□□□□□ -0.25
SSXP1-201ENST00000453640 ABCB7O75027 752 aa13.41□□□□□ -0.26
SSXP1-201ENST00000453640 POLA2Q14181 598 aa13.31□□□□□ -0.28
SSXP1-201ENST00000453640 ZBTB12Q9Y330 459 aaPredicted RBP13.02□□□□□ -0.33
SSXP1-201ENST00000453640 MKRN4PQ13434 485 aaPredicted RBP12.99□□□□□ -0.33
SSXP1-201ENST00000453640 FBLN2P98095 1184 aa12.92□□□□□ -0.34
SSXP1-201ENST00000453640 OSCARQ8IYS5 282 aa12.88□□□□□ -0.35
SSXP1-201ENST00000453640 RBM42Q9BTD8 480 aaKnown RBP12.79□□□□□ -0.36
SSXP1-201ENST00000453640 SPDYE2BA6NHP3 402 aa12.69□□□□□ -0.38
SSXP1-201ENST00000453640 SPDYE6P0CI01 402 aa12.69□□□□□ -0.38
SSXP1-201ENST00000453640 SPDYE2Q495Y8 402 aa12.69□□□□□ -0.38
SSXP1-201ENST00000453640 AKT1S1Q96B36 256 aa12.63□□□□□ -0.39
SSXP1-201ENST00000453640 ZNF692Q9BU19 519 aaPredicted RBP12.63□□□□□ -0.39
SSXP1-201ENST00000453640 SSUH2Q9Y2M2 353 aa12.61□□□□□ -0.39
SSXP1-201ENST00000453640 SPDYE4A6NLX3 237 aa12.56□□□□□ -0.4
SSXP1-201ENST00000453640 REM2Q8IYK8 340 aaPredicted RBP12.55□□□□□ -0.4
SSXP1-201ENST00000453640 PABPN1Q86U42 306 aaKnown RBP eCLIP12.47□□□□□ -0.41
SSXP1-201ENST00000453640 FKBP8Q14318 412 aa12.44□□□□□ -0.42
SSXP1-201ENST00000453640 PITPNM1O00562 1244 aa12.41□□□□□ -0.42
SSXP1-201ENST00000453640 CHRDL2Q6WN34 429 aa12.37□□□□□ -0.43
SSXP1-201ENST00000453640 PROM2Q8N271 834 aa12.37□□□□□ -0.43
SSXP1-201ENST00000453640 SPDYE1Q8NFV5 336 aaPredicted RBP12.35□□□□□ -0.43
SSXP1-201ENST00000453640 CLEC11AQ9Y240 323 aa12.31□□□□□ -0.44
SSXP1-201ENST00000453640 FXR2P51116 673 aaKnown RBP eCLIP12.2□□□□□ -0.46
SSXP1-201ENST00000453640 PIP4P2Q8N4L2 257 aa12.2□□□□□ -0.46
SSXP1-201ENST00000453640 STAG3Q9UJ98 1225 aa12.18□□□□□ -0.46
SSXP1-201ENST00000453640 PRR29P0C7W0 189 aa12.17□□□□□ -0.46
SSXP1-201ENST00000453640 POTEHQ6S545 545 aa12.16□□□□□ -0.46
SSXP1-201ENST00000453640 PRKAR2AP13861 404 aaKnown RBP12.07□□□□□ -0.48
SSXP1-201ENST00000453640 CHADLQ6NUI6 762 aa12.07□□□□□ -0.48
SSXP1-201ENST00000453640 CREBZFQ9NS37 354 aa12.04□□□□□ -0.48
SSXP1-201ENST00000453640 FBXO3Q9UK99 471 aa11.98□□□□□ -0.49
SSXP1-201ENST00000453640 FARP1Q9Y4F1 1045 aaPredicted RBP11.92□□□□□ -0.5
SSXP1-201ENST00000453640 MNX1P50219 401 aaPredicted RBP11.91□□□□□ -0.5
SSXP1-201ENST00000453640 MIER1Q8N108 512 aa11.91□□□□□ -0.5
SSXP1-201ENST00000453640 VASPP50552 380 aaPredicted RBP11.88□□□□□ -0.51
SSXP1-201ENST00000453640 PLCD3Q8N3E9 789 aa11.86□□□□□ -0.51
SSXP1-201ENST00000453640 HAX1O00165 279 aa11.82□□□□□ -0.52
SSXP1-201ENST00000453640 C19orf67A6NJJ6 358 aa11.79□□□□□ -0.52
SSXP1-201ENST00000453640 PLEKHG5O94827 1062 aa11.79□□□□□ -0.52
SSXP1-201ENST00000453640 EVX2Q03828 476 aa11.79□□□□□ -0.52
SSXP1-201ENST00000453640 NPM1P06748 294 aaKnown RBP eCLIP11.75□□□□□ -0.53
SSXP1-201ENST00000453640 IFNLR1Q8IU57 520 aaPredicted RBP11.73□□□□□ -0.53
SSXP1-201ENST00000453640 CD44P16070 742 aaKnown RBP11.71□□□□□ -0.53
SSXP1-201ENST00000453640 ZBTB47Q9UFB7 747 aaPredicted RBP11.7□□□□□ -0.54
SSXP1-201ENST00000453640 KLHL34Q8N239 644 aa11.68□□□□□ -0.54
SSXP1-201ENST00000453640 NUBP1P53384 320 aa11.67□□□□□ -0.54
SSXP1-201ENST00000453640 RASEFQ8IZ41 740 aa11.66□□□□□ -0.54
SSXP1-201ENST00000453640 ZRANB1Q9UGI0 708 aa11.63□□□□□ -0.55
SSXP1-201ENST00000453640 SP7Q8TDD2 431 aaPredicted RBP11.62□□□□□ -0.55
SSXP1-201ENST00000453640 TSPYL2Q9H2G4 693 aaPredicted RBP11.6□□□□□ -0.55
SSXP1-201ENST00000453640 SPOCK2Q92563 424 aa11.58□□□□□ -0.56
SSXP1-201ENST00000453640 PAK3O75914 559 aaPredicted RBP11.57□□□□□ -0.56
SSXP1-201ENST00000453640 ZNF579Q8NAF0 562 aaKnown RBP11.56□□□□□ -0.56
SSXP1-201ENST00000453640 CCDC61Q9Y6R9 512 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 136.5 ms