Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 BMS1P19-201ENST00000433925 393 ntBASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 OR2L9P-201ENST00000444456 913 ntBASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 AC016683.1-201ENST00000446590 559 ntTSL 4 BASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 AL590648.3-201ENST00000446962 473 ntTSL 3 BASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 SEPT14P1-201ENST00000458703 648 ntBASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 AC063955.1-201ENST00000462872 685 ntBASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 RPL23AP71-201ENST00000470966 469 ntBASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 TMEM150C-203ENST00000508701 566 ntTSL 4 BASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 AC006499.4-201ENST00000510947 694 ntBASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 AC114940.1-201ENST00000512162 1265 ntBASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 AC023161.1-201ENST00000549532 420 ntTSL 3 BASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 AC138331.1-201ENST00000549993 376 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 AL049830.4-201ENST00000555149 351 ntBASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 AC037479.1-201ENST00000558361 625 ntBASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 AC096996.1-201ENST00000563813 325 ntBASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 AC126323.4-201ENST00000566935 234 ntBASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 MIR5705-201ENST00000579870 89 ntBASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 RN7SL664P-201ENST00000584239 305 ntBASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 TREM1-204ENST00000589614 772 ntAPPRIS ALT2 TSL 2 BASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 AC000123.2-201ENST00000623124 461 ntBASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 AL390318.1-201ENST00000624564 687 ntBASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 OR8A1-204ENST00000642111 1145 ntBASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 AL356489.2-201ENST00000566968 3528 ntBASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 CR382285.2-201ENST00000624662 1495 ntBASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CHKB-CPT1BH3BT56 AC025031.4-201ENST00000621248 3271 ntBASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 AC090017.1-201ENST00000548612 1779 ntBASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 AC010329.2-201ENST00000595195 2737 ntBASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 GPR15-201ENST00000284311 1252 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 NUDT5-202ENST00000378937 919 ntTSL 3 BASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 RPS3AP2-201ENST00000407190 754 ntBASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 HSD17B7P1-201ENST00000412419 1017 ntBASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 CKS1BP6-201ENST00000424932 240 ntBASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 AC234779.1-201ENST00000425910 285 ntBASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 AC126120.1-201ENST00000431082 470 ntBASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 HNRNPA1P57-201ENST00000431359 530 ntTSL 4 BASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 ELOCP18-201ENST00000434209 337 ntBASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 AC094019.1-201ENST00000434678 472 ntBASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 USP9YP7-201ENST00000436723 430 ntBASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 OR52E7P-201ENST00000452394 933 ntBASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 USP9YP32-201ENST00000452432 430 ntBASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 AC008026.1-201ENST00000460492 447 ntBASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 NDUFB4P1-201ENST00000462398 381 ntBASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 RPL23AP65-201ENST00000475608 468 ntBASIC2.69□□□□□ -1.98
CHKB-CPT1BH3BT56 RN7SL814P-201ENST00000487715 300 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms