Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 MAPK10-270ENST00000641102 3538 ntBASIC6.94□□□□□ -1.3
NEUROD4Q9HD90 KYNUP1-201ENST00000466683 1406 ntBASIC6.94□□□□□ -1.3
NEUROD4Q9HD90 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
NEUROD4Q9HD90 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
NEUROD4Q9HD90 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
NEUROD4Q9HD90 SLC9A4-201ENST00000295269 4138 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
NEUROD4Q9HD90 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
NEUROD4Q9HD90 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
NEUROD4Q9HD90 ANAPC5-204ENST00000441917 2147 ntTSL 5 BASIC6.94□□□□□ -1.3
NEUROD4Q9HD90 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
NEUROD4Q9HD90 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
NEUROD4Q9HD90 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
NEUROD4Q9HD90 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.94□□□□□ -1.3
NEUROD4Q9HD90 GSDMB-202ENST00000360317 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
NEUROD4Q9HD90 CASP12-212ENST00000613512 1451 ntAPPRIS P5 TSL 1 (best) BASIC6.94□□□□□ -1.3
NEUROD4Q9HD90 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
NEUROD4Q9HD90 NELL2-217ENST00000551601 3148 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
NEUROD4Q9HD90 IFT22-201ENST00000315322 1130 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
NEUROD4Q9HD90 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
NEUROD4Q9HD90 RNU6-845P-201ENST00000362578 103 ntBASIC6.94□□□□□ -1.3
NEUROD4Q9HD90 Y_RNA.132-201ENST00000363421 102 ntBASIC6.94□□□□□ -1.3
NEUROD4Q9HD90 SNORD81.2-201ENST00000365153 76 ntBASIC6.94□□□□□ -1.3
NEUROD4Q9HD90 SUGT1P1-201ENST00000379514 476 ntBASIC6.94□□□□□ -1.3
NEUROD4Q9HD90 RNU6-878P-201ENST00000384578 110 ntBASIC6.94□□□□□ -1.3
NEUROD4Q9HD90 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
NEUROD4Q9HD90 IYD-205ENST00000392256 882 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
NEUROD4Q9HD90 SNORA3.1-201ENST00000408166 111 ntBASIC6.94□□□□□ -1.3
NEUROD4Q9HD90 RN7SKP225-201ENST00000410405 352 ntBASIC6.94□□□□□ -1.3
NEUROD4Q9HD90 RPL12P10-201ENST00000413498 498 ntBASIC6.94□□□□□ -1.3
NEUROD4Q9HD90 AC023141.1-201ENST00000419418 379 ntBASIC6.94□□□□□ -1.3
NEUROD4Q9HD90 NPPA-AS1-202ENST00000446542 1032 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
NEUROD4Q9HD90 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC6.94□□□□□ -1.3
NEUROD4Q9HD90 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC6.94□□□□□ -1.3
NEUROD4Q9HD90 RPL7AP52-201ENST00000458096 790 ntBASIC6.94□□□□□ -1.3
NEUROD4Q9HD90 RPS18P13-201ENST00000461260 454 ntBASIC6.94□□□□□ -1.3
NEUROD4Q9HD90 AC135721.2-201ENST00000464237 300 ntBASIC6.94□□□□□ -1.3
NEUROD4Q9HD90 AC040975.1-201ENST00000472104 316 ntBASIC6.94□□□□□ -1.3
NEUROD4Q9HD90 RN7SL549P-201ENST00000478997 282 ntBASIC6.94□□□□□ -1.3
NEUROD4Q9HD90 AC066616.1-201ENST00000486795 413 ntBASIC6.94□□□□□ -1.3
NEUROD4Q9HD90 AC111193.1-201ENST00000504097 155 ntBASIC6.94□□□□□ -1.3
NEUROD4Q9HD90 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
NEUROD4Q9HD90 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC6.94□□□□□ -1.3
NEUROD4Q9HD90 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
NEUROD4Q9HD90 AC111194.1-201ENST00000509711 422 ntTSL 3 BASIC6.94□□□□□ -1.3
NEUROD4Q9HD90 ROPN1B-207ENST00000511082 782 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
NEUROD4Q9HD90 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC6.94□□□□□ -1.3
NEUROD4Q9HD90 RN7SKP242-201ENST00000515967 289 ntBASIC6.94□□□□□ -1.3
NEUROD4Q9HD90 HMGB1P23-201ENST00000518743 568 ntBASIC6.94□□□□□ -1.3
NEUROD4Q9HD90 AC138832.1-201ENST00000522871 556 ntBASIC6.94□□□□□ -1.3
NEUROD4Q9HD90 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
NEUROD4Q9HD90 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC6.94□□□□□ -1.3
NEUROD4Q9HD90 GSTM3-206ENST00000540225 678 ntTSL 5 BASIC6.94□□□□□ -1.3
NEUROD4Q9HD90 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC6.94□□□□□ -1.3
NEUROD4Q9HD90 AL512310.1-201ENST00000548639 172 ntBASIC6.94□□□□□ -1.3
NEUROD4Q9HD90 AC078814.3-201ENST00000553036 491 ntBASIC6.94□□□□□ -1.3
NEUROD4Q9HD90 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC6.94□□□□□ -1.3
NEUROD4Q9HD90 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC6.94□□□□□ -1.3
NEUROD4Q9HD90 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.94□□□□□ -1.3
NEUROD4Q9HD90 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC6.94□□□□□ -1.3
NEUROD4Q9HD90 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC6.94□□□□□ -1.3
NEUROD4Q9HD90 AC012447.1-201ENST00000577914 682 ntTSL 3 BASIC6.94□□□□□ -1.3
NEUROD4Q9HD90 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC6.94□□□□□ -1.3
NEUROD4Q9HD90 H3F3BP2-201ENST00000583907 357 ntBASIC6.94□□□□□ -1.3
NEUROD4Q9HD90 AC090241.1-201ENST00000587732 621 ntBASIC6.94□□□□□ -1.3
NEUROD4Q9HD90 AC010761.6-201ENST00000587898 197 ntTSL 3 BASIC6.94□□□□□ -1.3
NEUROD4Q9HD90 LINC00906-202ENST00000587998 648 ntTSL 3 BASIC6.94□□□□□ -1.3
NEUROD4Q9HD90 AC023206.1-201ENST00000605824 298 ntBASIC6.94□□□□□ -1.3
NEUROD4Q9HD90 AC133041.1-201ENST00000608389 201 ntTSL 3 BASIC6.94□□□□□ -1.3
NEUROD4Q9HD90 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC6.94□□□□□ -1.3
NEUROD4Q9HD90 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
NEUROD4Q9HD90 ARHGAP42P1-201ENST00000507474 1976 ntBASIC6.94□□□□□ -1.3
NEUROD4Q9HD90 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
NEUROD4Q9HD90 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
NEUROD4Q9HD90 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC6.94□□□□□ -1.3
NEUROD4Q9HD90 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.94□□□□□ -1.3
NEUROD4Q9HD90 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC6.94□□□□□ -1.3
NEUROD4Q9HD90 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
NEUROD4Q9HD90 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
NEUROD4Q9HD90 BRS3-201ENST00000370648 2833 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
NEUROD4Q9HD90 PLP1-220ENST00000612423 3132 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
NEUROD4Q9HD90 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
NEUROD4Q9HD90 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
NEUROD4Q9HD90 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
NEUROD4Q9HD90 OR1L8-202ENST00000641027 2024 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
NEUROD4Q9HD90 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
NEUROD4Q9HD90 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
NEUROD4Q9HD90 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
NEUROD4Q9HD90 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
NEUROD4Q9HD90 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
NEUROD4Q9HD90 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC6.93□□□□□ -1.3
NEUROD4Q9HD90 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC6.93□□□□□ -1.3
NEUROD4Q9HD90 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
NEUROD4Q9HD90 RBMX2P2-201ENST00000257020 946 ntBASIC6.93□□□□□ -1.3
NEUROD4Q9HD90 RPL10P16-201ENST00000325000 645 ntBASIC6.93□□□□□ -1.3
NEUROD4Q9HD90 RNU6-582P-201ENST00000362989 107 ntBASIC6.93□□□□□ -1.3
NEUROD4Q9HD90 RN7SKP63-201ENST00000363187 301 ntBASIC6.93□□□□□ -1.3
NEUROD4Q9HD90 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
NEUROD4Q9HD90 CUBN-201ENST00000377823 705 ntTSL 3 BASIC6.93□□□□□ -1.3
NEUROD4Q9HD90 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC6.93□□□□□ -1.3
NEUROD4Q9HD90 MIR320B1-201ENST00000390209 79 ntBASIC6.93□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms