Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 AC091152.3-201ENST00000604227 325 ntBASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 AL035425.1-201ENST00000608811 551 ntTSL 4 BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 AL356299.2-201ENST00000609218 586 ntTSL 4 BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 MECP2-212ENST00000611468 603 ntTSL 5 BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 PCDH18-206ENST00000611581 819 ntTSL 4 BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 AL627230.8-201ENST00000613335 202 ntBASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 EIF3K-214ENST00000614624 780 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 NPM2-213ENST00000615914 411 ntTSL 5 BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 TARDBP-217ENST00000616545 920 ntTSL 5 BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 AL512652.1-201ENST00000619006 500 ntBASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 GPSM3-210ENST00000619085 1177 ntTSL 5 BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 POU5F1-208ENST00000620031 573 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 NPM2-214ENST00000621538 645 ntAPPRIS P2 TSL 2 BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 PCBP1-AS1-291ENST00000626440 461 ntTSL 5 BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 DPCD-206ENST00000626968 541 ntTSL 5 BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 PTPN7-219ENST00000629151 437 ntTSL 5 BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 AC073488.3-201ENST00000631611 778 ntBASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 AC111152.1-202ENST00000635848 339 ntBASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 AL034408.1-202ENST00000636088 415 ntBASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 CECR7-205ENST00000636648 330 ntBASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 AC005841.2-201ENST00000637658 1167 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 TWNK-202ENST00000370228 3175 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 GGA3-213ENST00000582486 2319 ntTSL 5 BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 CCT7P2-201ENST00000479109 1454 ntBASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 FOXN3-201ENST00000261302 2542 ntAPPRIS ALT1 TSL 5 BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 SLFN5-202ENST00000542451 2540 ntTSL 2 BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 TIA1-205ENST00000433529 4647 ntTSL 2 BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 TECTB-201ENST00000369422 2713 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 TDGF1P3-202ENST00000602699 2710 ntBASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 TP63-204ENST00000392460 1668 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 CPT1A-201ENST00000265641 5232 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 INSC-203ENST00000424273 2943 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 FMN2-206ENST00000543681 2902 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 NAGA-202ENST00000402937 1869 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 HIVEP2-201ENST00000012134 9755 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 GLE1-201ENST00000309971 3321 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 FGD3-201ENST00000337352 3303 ntAPPRIS P3 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 MTMR12-202ENST00000280285 4966 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 CD302-201ENST00000259053 3741 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 CPEB4-207ENST00000519835 2257 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 PRR5L-216ENST00000530639 2291 ntAPPRIS P1 TSL 2 BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 AC091078.3-201ENST00000556708 2284 ntTSL 2 BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 AC022167.2-201ENST00000565934 2288 ntTSL 3 BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 DRP2-203ENST00000402866 7018 ntAPPRIS P3 TSL 5 BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 SVEP1-202ENST00000374469 12194 ntAPPRIS P2 TSL 5 BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 CAPN13-201ENST00000295055 2683 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 ZNF43-201ENST00000354959 2881 ntAPPRIS P3 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 C14orf159-223ENST00000522322 2856 ntAPPRIS P3 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 GRAMD2A-201ENST00000309731 3281 ntAPPRIS P2 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 PGM2-201ENST00000381967 3264 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 GIGYF2-202ENST00000409196 5747 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 GLYR1-202ENST00000436648 3466 ntTSL 2 BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 LINC00607-205ENST00000445174 3690 ntTSL 2 BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 WWP2-213ENST00000568684 3672 ntTSL 2 BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 RUFY2-213ENST00000602465 3863 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 SLC22A8-210ENST00000545207 1622 ntTSL 2 BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 PRAMEF8-201ENST00000357367 1844 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 PAAF1-215ENST00000544909 1802 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 PDE1A-203ENST00000409365 2034 ntTSL 5 BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 FAM149A-206ENST00000503432 2011 ntAPPRIS P2 TSL 2 BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 TXNRD1-219ENST00000529546 2018 ntTSL 2 BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 ARHGEF10-203ENST00000398560 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 AKAP2-202ENST00000374525 6866 ntAPPRIS P3 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 AL592437.2-201ENST00000421655 2434 ntBASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 LINC02208-201ENST00000506769 2803 ntTSL 5 BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 MCM3-207ENST00000616552 3208 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 AL355602.1-201ENST00000641472 3402 ntBASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 ZNF304-201ENST00000282286 4202 ntAPPRIS P3 TSL 2 BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 MED23-205ENST00000368068 5233 ntAPPRIS P4 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 RPS10-NUDT3-202ENST00000639725 4782 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 PDK4-201ENST00000005178 3576 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 HSPH1-209ENST00000630972 3570 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 TTC31-202ENST00000410003 3358 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 ELF3-203ENST00000367284 3179 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 RND3-202ENST00000375734 2777 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 AC007256.1-201ENST00000392253 2765 ntBASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 TROAP-215ENST00000551245 2771 ntAPPRIS ALT2 TSL 2 BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 LINC01278-204ENST00000609143 2768 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 C1orf220-202ENST00000521244 2577 ntTSL 2 BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 FBXO3-201ENST00000265651 2397 ntAPPRIS P3 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 UBE2D3-203ENST00000343106 2389 ntAPPRIS P4 TSL 2 BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 MELK-209ENST00000541717 2363 ntTSL 2 BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 ADAM3A-203ENST00000461344 2157 ntBASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 GTF2A1-203ENST00000553612 6306 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 MAMLD1-204ENST00000426613 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 TRERF1-203ENST00000372917 3914 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 MCF2-209ENST00000520602 3945 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
KRTAP4-4Q9BYR3 NDST2-201ENST00000299641 3535 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 BUB1-201ENST00000302759 3507 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 ATXN1-202ENST00000436367 10587 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-4Q9BYR3 AP000350.7-201ENST00000624923 8030 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 152.8 ms