Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.51□□□□□ -1.69
HIST2H3AQ71DI3 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
HIST2H3AQ71DI3 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.51□□□□□ -1.69
HIST2H3AQ71DI3 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HIST2H3AQ71DI3 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.51□□□□□ -1.69
HIST2H3AQ71DI3 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.51□□□□□ -1.69
HIST2H3AQ71DI3 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
HIST2H3AQ71DI3 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HIST2H3AQ71DI3 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
HIST2H3AQ71DI3 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.51□□□□□ -1.69
HIST2H3AQ71DI3 FGG-205ENST00000407946 1636 ntTSL 5 BASIC4.5□□□□□ -1.69
HIST2H3AQ71DI3 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
HIST2H3AQ71DI3 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HIST2H3AQ71DI3 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
HIST2H3AQ71DI3 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HIST2H3AQ71DI3 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.5□□□□□ -1.69
HIST2H3AQ71DI3 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.5□□□□□ -1.69
HIST2H3AQ71DI3 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
HIST2H3AQ71DI3 RNU2-22P-201ENST00000411266 212 ntBASIC4.5□□□□□ -1.69
HIST2H3AQ71DI3 AC007738.1-201ENST00000413892 348 ntBASIC4.5□□□□□ -1.69
HIST2H3AQ71DI3 Z68694.1-201ENST00000413929 841 ntBASIC4.5□□□□□ -1.69
HIST2H3AQ71DI3 NPM1P4-201ENST00000414095 812 ntBASIC4.5□□□□□ -1.69
HIST2H3AQ71DI3 SLC35E1P1-201ENST00000419313 864 ntBASIC4.5□□□□□ -1.69
HIST2H3AQ71DI3 AL139148.1-201ENST00000427122 680 ntBASIC4.5□□□□□ -1.69
HIST2H3AQ71DI3 NPM1P22-201ENST00000427761 952 ntBASIC4.5□□□□□ -1.69
HIST2H3AQ71DI3 COX6CP13-201ENST00000428703 226 ntBASIC4.5□□□□□ -1.69
HIST2H3AQ71DI3 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.5□□□□□ -1.69
HIST2H3AQ71DI3 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.5□□□□□ -1.69
HIST2H3AQ71DI3 ARAFP2-201ENST00000440565 559 ntBASIC4.5□□□□□ -1.69
HIST2H3AQ71DI3 AL391987.1-201ENST00000441025 200 ntBASIC4.5□□□□□ -1.69
HIST2H3AQ71DI3 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC4.5□□□□□ -1.69
HIST2H3AQ71DI3 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.5□□□□□ -1.69
HIST2H3AQ71DI3 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC4.5□□□□□ -1.69
HIST2H3AQ71DI3 AC020779.1-201ENST00000478757 796 ntBASIC4.5□□□□□ -1.69
HIST2H3AQ71DI3 RPL7P39-201ENST00000481157 744 ntBASIC4.5□□□□□ -1.69
HIST2H3AQ71DI3 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HIST2H3AQ71DI3 AC138938.1-201ENST00000515431 782 ntBASIC4.5□□□□□ -1.69
HIST2H3AQ71DI3 HMGB1P19-201ENST00000517578 577 ntBASIC4.5□□□□□ -1.69
HIST2H3AQ71DI3 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.5□□□□□ -1.69
HIST2H3AQ71DI3 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC4.5□□□□□ -1.69
HIST2H3AQ71DI3 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
HIST2H3AQ71DI3 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
HIST2H3AQ71DI3 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.5□□□□□ -1.69
HIST2H3AQ71DI3 AC012146.2-201ENST00000576545 416 ntBASIC4.5□□□□□ -1.69
HIST2H3AQ71DI3 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.5□□□□□ -1.69
HIST2H3AQ71DI3 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC4.5□□□□□ -1.69
HIST2H3AQ71DI3 AC011445.2-201ENST00000599274 173 ntBASIC4.5□□□□□ -1.69
HIST2H3AQ71DI3 BNIP3P35-201ENST00000604530 490 ntBASIC4.5□□□□□ -1.69
HIST2H3AQ71DI3 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.5□□□□□ -1.69
HIST2H3AQ71DI3 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.5□□□□□ -1.69
HIST2H3AQ71DI3 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.5□□□□□ -1.69
HIST2H3AQ71DI3 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.5□□□□□ -1.69
HIST2H3AQ71DI3 AP000648.2-201ENST00000624182 404 ntBASIC4.5□□□□□ -1.69
HIST2H3AQ71DI3 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.5□□□□□ -1.69
HIST2H3AQ71DI3 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
HIST2H3AQ71DI3 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.5□□□□□ -1.69
HIST2H3AQ71DI3 MTCO1P15-201ENST00000529569 1526 ntBASIC4.5□□□□□ -1.69
HIST2H3AQ71DI3 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HIST2H3AQ71DI3 AP000542.2-201ENST00000623199 6179 ntBASIC4.5□□□□□ -1.69
HIST2H3AQ71DI3 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HIST2H3AQ71DI3 MAPK10-320ENST00000641462 6696 ntBASIC4.5□□□□□ -1.69
HIST2H3AQ71DI3 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.5□□□□□ -1.69
HIST2H3AQ71DI3 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HIST2H3AQ71DI3 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HIST2H3AQ71DI3 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HIST2H3AQ71DI3 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.5□□□□□ -1.69
HIST2H3AQ71DI3 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.49□□□□□ -1.69
HIST2H3AQ71DI3 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HIST2H3AQ71DI3 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
HIST2H3AQ71DI3 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
HIST2H3AQ71DI3 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HIST2H3AQ71DI3 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HIST2H3AQ71DI3 MIR600-201ENST00000385007 98 ntBASIC4.49□□□□□ -1.69
HIST2H3AQ71DI3 AL035079.1-201ENST00000405210 287 ntBASIC4.49□□□□□ -1.69
HIST2H3AQ71DI3 RN7SKP59-201ENST00000410520 314 ntBASIC4.49□□□□□ -1.69
HIST2H3AQ71DI3 RN7SKP206-201ENST00000410823 293 ntBASIC4.49□□□□□ -1.69
HIST2H3AQ71DI3 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC4.49□□□□□ -1.69
HIST2H3AQ71DI3 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC4.49□□□□□ -1.69
HIST2H3AQ71DI3 OR52B5P-201ENST00000435337 951 ntBASIC4.49□□□□□ -1.69
HIST2H3AQ71DI3 AC092447.2-201ENST00000435487 669 ntBASIC4.49□□□□□ -1.69
HIST2H3AQ71DI3 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HIST2H3AQ71DI3 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.49□□□□□ -1.69
HIST2H3AQ71DI3 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
HIST2H3AQ71DI3 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.49□□□□□ -1.69
HIST2H3AQ71DI3 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.49□□□□□ -1.69
HIST2H3AQ71DI3 RFPL4AP5-201ENST00000514977 504 ntBASIC4.49□□□□□ -1.69
HIST2H3AQ71DI3 RN7SKP46-201ENST00000515942 234 ntBASIC4.49□□□□□ -1.69
HIST2H3AQ71DI3 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HIST2H3AQ71DI3 AL512310.9-201ENST00000553311 948 ntBASIC4.49□□□□□ -1.69
HIST2H3AQ71DI3 SMARCE1P3-201ENST00000553649 1231 ntBASIC4.49□□□□□ -1.69
HIST2H3AQ71DI3 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.49□□□□□ -1.69
HIST2H3AQ71DI3 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.49□□□□□ -1.69
HIST2H3AQ71DI3 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.49□□□□□ -1.69
HIST2H3AQ71DI3 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC4.49□□□□□ -1.69
HIST2H3AQ71DI3 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.49□□□□□ -1.69
HIST2H3AQ71DI3 OR52B5P-202ENST00000641118 1110 ntBASIC4.49□□□□□ -1.69
HIST2H3AQ71DI3 AC073869.10-201ENST00000642016 354 ntBASIC4.49□□□□□ -1.69
HIST2H3AQ71DI3 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC4.49□□□□□ -1.69
HIST2H3AQ71DI3 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HIST2H3AQ71DI3 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms