Protein–RNA interactions for Protein: Q9BYQ2

KRTAP9-4, Keratin-associated protein 9-4, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP9-4Q9BYQ2 BORA-206ENST00000613797 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 HDC-201ENST00000267845 2705 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 UMPS-201ENST00000232607 6738 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 ST3GAL6-202ENST00000394162 3571 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 ATP6V0D2-201ENST00000285393 2446 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 TIAM2-212ENST00000529824 5262 ntTSL 5 BASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 DGCR8-203ENST00000407755 4129 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 SNURFL-201ENST00000309296 343 ntBASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 PRM3-201ENST00000327157 424 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 PPIAP22-201ENST00000358455 498 ntBASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 RNU6-727P-201ENST00000363592 107 ntBASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 MOG-217ENST00000376891 889 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 RNU6-895P-201ENST00000384125 103 ntBASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 SNORA9B-201ENST00000384170 133 ntBASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 Y_RNA.486-201ENST00000384398 107 ntBASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 MIR635-201ENST00000384830 98 ntBASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 MIR514A1-201ENST00000385133 98 ntBASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 RNU6-1319P-201ENST00000390855 104 ntBASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 RNU6-747P-201ENST00000390928 104 ntBASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 RNU6-241P-201ENST00000391148 104 ntBASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 AP000567.1-201ENST00000406413 156 ntBASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 MIR548F3-201ENST00000408509 87 ntBASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 RAB1C-201ENST00000409159 606 ntBASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 AC017078.1-201ENST00000416146 368 ntBASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 FAM197Y10-201ENST00000425318 520 ntBASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 AP000346.2-201ENST00000430707 906 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 AL163953.1-201ENST00000436530 726 ntTSL 3 BASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 LRTOMT-208ENST00000439209 801 ntTSL 3 BASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 NME6-211ENST00000447314 621 ntTSL 3 BASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 AOAH-IT1-201ENST00000449672 573 ntTSL 4 BASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 DDX11L1-201ENST00000450305 632 ntBASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 NDUFS5P3-201ENST00000450668 321 ntBASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 RPS19P7-201ENST00000455650 396 ntBASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 snoU109.4-201ENST00000458953 143 ntBASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 AC007163.2-201ENST00000479041 750 ntTSL 4 BASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 RN7SL166P-201ENST00000489872 280 ntBASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 AC010409.2-201ENST00000505780 478 ntBASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 HMGN2P4-201ENST00000506772 381 ntBASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 IGHVII-15-1-201ENST00000517931 220 ntBASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 RN7SL260P-201ENST00000521103 282 ntBASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 NR1H3-230ENST00000527949 1065 ntTSL 2 BASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 ZSCAN9-208ENST00000531981 854 ntTSL 4 BASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 ARL2-206ENST00000533729 795 ntTSL 5 BASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 DNM1P38-201ENST00000560794 433 ntBASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 AC113208.2-201ENST00000565381 608 ntBASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 MIR466-201ENST00000580653 84 ntBASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 MIR3683-201ENST00000580847 82 ntBASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 AC067819.1-201ENST00000583846 154 ntBASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 MIR4673-201ENST00000584777 59 ntBASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 RN7SL823P-201ENST00000584886 295 ntBASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 SAMD4B-206ENST00000596368 1176 ntTSL 5 BASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 AC011467.6-201ENST00000603174 320 ntBASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 AL078624.2-201ENST00000605063 554 ntBASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 Metazoa_SRP.61-201ENST00000613464 315 ntBASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 AC015914.2-201ENST00000618167 288 ntBASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 LPIN3-201ENST00000373257 4363 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 RAPGEF3-204ENST00000405493 5751 ntAPPRIS P3 TSL 5 BASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 IMMT-207ENST00000449247 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 EPN3-201ENST00000268933 4071 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 AC139713.2-214ENST00000642059 1811 ntBASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 AP001528.3-201ENST00000624364 3249 ntBASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 CACUL1-201ENST00000369151 11311 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 PLEKHG5-204ENST00000377732 3753 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 TACC1-201ENST00000276520 6513 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 TMX2-202ENST00000378312 1521 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 CD22-203ENST00000419549 2642 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 KPNB1-202ENST00000535458 3163 ntTSL 2 BASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 MAN2C1-242ENST00000569482 3177 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 CNTROB-202ENST00000563694 3705 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 MEP1A-201ENST00000230588 2892 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 LRRC40-201ENST00000370952 2884 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 CEP68-201ENST00000260569 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 IL10RA-201ENST00000227752 3695 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 SLFN12L-201ENST00000260908 3119 ntAPPRIS P2 TSL 5 BASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 PPP3CB-203ENST00000394828 3119 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 ANAPC4-210ENST00000510092 2599 ntAPPRIS ALT1 TSL 5 BASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 DDX24-211ENST00000640432 2580 ntTSL 5 BASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 SEC31A-202ENST00000311785 3909 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 AC005722.2-201ENST00000577087 3370 ntBASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 CAMSAP1-202ENST00000389532 7696 ntAPPRIS P2 TSL 5 BASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 NDRG4-204ENST00000394282 3626 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 CDH3-202ENST00000429102 3611 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 PSMC2-203ENST00000435765 3054 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 TULP3-202ENST00000448120 3076 ntAPPRIS P3 TSL 2 BASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 TBC1D14-201ENST00000409757 4925 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 COL25A1-202ENST00000399127 2500 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC3.27□□□□□ -1.89
KRTAP9-4Q9BYQ2 NEFM-204ENST00000518131 2500 ntAPPRIS ALT2 TSL 2 BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms