Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AL121809.2-201ENST00000613169 341 ntBASIC7.16□□□□□ -1.26
COL25A1Q9BXS0 AC008250.2-201ENST00000615261 205 ntBASIC7.16□□□□□ -1.26
COL25A1Q9BXS0 AC091925.1-201ENST00000623204 462 ntBASIC7.16□□□□□ -1.26
COL25A1Q9BXS0 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC7.16□□□□□ -1.26
COL25A1Q9BXS0 AC068189.1-201ENST00000501164 2632 ntTSL 2 BASIC7.16□□□□□ -1.26
COL25A1Q9BXS0 FRRS1-201ENST00000287474 2678 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
COL25A1Q9BXS0 TNS4-201ENST00000254051 4067 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
COL25A1Q9BXS0 PPP6C-201ENST00000373547 4118 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
COL25A1Q9BXS0 ZKSCAN5-201ENST00000326775 4178 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
COL25A1Q9BXS0 CCNT1-201ENST00000261900 6973 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
COL25A1Q9BXS0 GSTO2-202ENST00000369707 6423 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
COL25A1Q9BXS0 PCM1-212ENST00000519253 6443 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
COL25A1Q9BXS0 DNM1L-207ENST00000452533 4439 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
COL25A1Q9BXS0 AC100871.1-201ENST00000507871 1456 ntBASIC7.16□□□□□ -1.26
COL25A1Q9BXS0 AL445933.1-201ENST00000434240 2242 ntBASIC7.16□□□□□ -1.26
COL25A1Q9BXS0 AC004941.1-201ENST00000417506 3120 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
COL25A1Q9BXS0 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC7.16□□□□□ -1.26
COL25A1Q9BXS0 OR2A5-202ENST00000641693 8681 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
COL25A1Q9BXS0 AC079298.1-201ENST00000625026 1619 ntBASIC7.16□□□□□ -1.26
COL25A1Q9BXS0 ELP4-229ENST00000640961 8164 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
COL25A1Q9BXS0 AC068733.1-202ENST00000531479 2456 ntBASIC7.16□□□□□ -1.26
COL25A1Q9BXS0 TRIM42-201ENST00000286349 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
COL25A1Q9BXS0 AL161756.1-201ENST00000555861 1751 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
COL25A1Q9BXS0 TOM1L1-220ENST00000575333 1849 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
COL25A1Q9BXS0 MAPK10-244ENST00000639972 2818 ntTSL 5 BASIC7.15□□□□□ -1.26
COL25A1Q9BXS0 ZNF585B-204ENST00000531805 2971 ntTSL 2 BASIC7.15□□□□□ -1.26
COL25A1Q9BXS0 PIGP-202ENST00000360525 6998 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
COL25A1Q9BXS0 PARP1P1-201ENST00000413631 3026 ntBASIC7.15□□□□□ -1.26
COL25A1Q9BXS0 EMC1-202ENST00000375208 4084 ntTSL 2 BASIC7.15□□□□□ -1.26
COL25A1Q9BXS0 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
COL25A1Q9BXS0 NEDD4L-214ENST00000586263 3347 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
COL25A1Q9BXS0 MTERF4-222ENST00000614476 4524 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
COL25A1Q9BXS0 LIMCH1-215ENST00000512632 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
COL25A1Q9BXS0 KAT14-202ENST00000435364 3618 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.26
COL25A1Q9BXS0 ARNT-208ENST00000505755 2427 ntTSL 2 BASIC7.15□□□□□ -1.26
COL25A1Q9BXS0 LINC00607-205ENST00000445174 3690 ntTSL 2 BASIC7.15□□□□□ -1.26
COL25A1Q9BXS0 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
COL25A1Q9BXS0 RPL21P132-201ENST00000331267 462 ntBASIC7.15□□□□□ -1.26
COL25A1Q9BXS0 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC7.15□□□□□ -1.26
COL25A1Q9BXS0 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
COL25A1Q9BXS0 SNORA56-201ENST00000383966 129 ntBASIC7.15□□□□□ -1.26
COL25A1Q9BXS0 RNU6-1103P-201ENST00000384150 107 ntBASIC7.15□□□□□ -1.26
COL25A1Q9BXS0 RPS3AP36-201ENST00000398190 775 ntBASIC7.15□□□□□ -1.26
COL25A1Q9BXS0 AL359715.1-201ENST00000404330 555 ntBASIC7.15□□□□□ -1.26
COL25A1Q9BXS0 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC7.15□□□□□ -1.26
COL25A1Q9BXS0 RPS27AP14-201ENST00000422868 454 ntBASIC7.15□□□□□ -1.26
COL25A1Q9BXS0 HMGB1P45-201ENST00000435986 653 ntBASIC7.15□□□□□ -1.26
COL25A1Q9BXS0 UBE2FP3-201ENST00000436366 524 ntBASIC7.15□□□□□ -1.26
COL25A1Q9BXS0 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC7.15□□□□□ -1.26
COL25A1Q9BXS0 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC7.15□□□□□ -1.26
COL25A1Q9BXS0 RN7SL654P-201ENST00000479178 292 ntBASIC7.15□□□□□ -1.26
COL25A1Q9BXS0 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC7.15□□□□□ -1.26
COL25A1Q9BXS0 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
COL25A1Q9BXS0 LINC01094-206ENST00000514130 594 ntTSL 4 BASIC7.15□□□□□ -1.26
COL25A1Q9BXS0 RNA5SP362-201ENST00000516048 118 ntBASIC7.15□□□□□ -1.26
COL25A1Q9BXS0 RNU7-30P-201ENST00000516835 62 ntBASIC7.15□□□□□ -1.26
COL25A1Q9BXS0 RNU6-1271P-201ENST00000517049 105 ntBASIC7.15□□□□□ -1.26
COL25A1Q9BXS0 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC7.15□□□□□ -1.26
COL25A1Q9BXS0 AP005902.1-201ENST00000521358 186 ntBASIC7.15□□□□□ -1.26
COL25A1Q9BXS0 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC7.15□□□□□ -1.26
COL25A1Q9BXS0 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC7.15□□□□□ -1.26
COL25A1Q9BXS0 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC7.15□□□□□ -1.26
COL25A1Q9BXS0 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC7.15□□□□□ -1.26
COL25A1Q9BXS0 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC7.15□□□□□ -1.26
COL25A1Q9BXS0 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC7.15□□□□□ -1.26
COL25A1Q9BXS0 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC7.15□□□□□ -1.26
COL25A1Q9BXS0 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC7.15□□□□□ -1.26
COL25A1Q9BXS0 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC7.15□□□□□ -1.26
COL25A1Q9BXS0 AL162413.1-201ENST00000603198 110 ntBASIC7.15□□□□□ -1.26
COL25A1Q9BXS0 HNRNPA3P9-201ENST00000604913 979 ntBASIC7.15□□□□□ -1.26
COL25A1Q9BXS0 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC7.15□□□□□ -1.26
COL25A1Q9BXS0 AC037198.3-201ENST00000616754 526 ntBASIC7.15□□□□□ -1.26
COL25A1Q9BXS0 RFPL4AP6-201ENST00000616792 846 ntBASIC7.15□□□□□ -1.26
COL25A1Q9BXS0 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
COL25A1Q9BXS0 AC061999.1-201ENST00000624454 177 ntBASIC7.15□□□□□ -1.26
COL25A1Q9BXS0 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
COL25A1Q9BXS0 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC7.15□□□□□ -1.26
COL25A1Q9BXS0 ZNF484-203ENST00000395505 3960 ntAPPRIS ALT2 TSL 2 BASIC7.15□□□□□ -1.26
COL25A1Q9BXS0 AC107982.1-201ENST00000507171 1300 ntBASIC7.15□□□□□ -1.26
COL25A1Q9BXS0 HUS1-201ENST00000258774 2935 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
COL25A1Q9BXS0 CASP8-205ENST00000358485 2930 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.27
COL25A1Q9BXS0 DIAPH3-204ENST00000400320 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.27
COL25A1Q9BXS0 TMEM182-203ENST00000412401 3593 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
COL25A1Q9BXS0 DRP2-202ENST00000395209 7277 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.27
COL25A1Q9BXS0 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
COL25A1Q9BXS0 ZNF441-201ENST00000357901 4356 ntAPPRIS P1 TSL 3 BASIC7.15□□□□□ -1.27
COL25A1Q9BXS0 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC7.15□□□□□ -1.27
COL25A1Q9BXS0 FAM13A-205ENST00000503556 3386 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
COL25A1Q9BXS0 ZNF546-207ENST00000600094 3426 ntAPPRIS ALT2 TSL 2 BASIC7.14□□□□□ -1.27
COL25A1Q9BXS0 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
COL25A1Q9BXS0 GPR156-201ENST00000315843 4193 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
COL25A1Q9BXS0 KDM5A-201ENST00000399788 10763 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
COL25A1Q9BXS0 CTNND1-230ENST00000532245 5655 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
COL25A1Q9BXS0 KALRN-202ENST00000291478 10888 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
COL25A1Q9BXS0 NUDT13-201ENST00000349051 1835 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
COL25A1Q9BXS0 NELL1-203ENST00000357134 3022 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
COL25A1Q9BXS0 RNY3P3-201ENST00000363816 102 ntBASIC7.14□□□□□ -1.27
COL25A1Q9BXS0 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
COL25A1Q9BXS0 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
COL25A1Q9BXS0 Y_RNA.384-201ENST00000383909 102 ntBASIC7.14□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms