Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 BTK-202ENST00000372880 2248 ntTSL 2 BASIC8.11□□□□□ -1.11
LRCH3Q96II8 PPIP5K2-202ENST00000358359 5813 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
LRCH3Q96II8 IL31RA-205ENST00000396836 2426 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
LRCH3Q96II8 AC119674.1-202ENST00000641333 1860 ntBASIC8.11□□□□□ -1.11
LRCH3Q96II8 GUCY2F-201ENST00000218006 3714 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
LRCH3Q96II8 ABCA4-207ENST00000536513 3740 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
LRCH3Q96II8 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
LRCH3Q96II8 ADGRB3-202ENST00000370598 6010 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
LRCH3Q96II8 FRMPD2-213ENST00000636244 4194 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
LRCH3Q96II8 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
LRCH3Q96II8 TP63-203ENST00000354600 4668 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
LRCH3Q96II8 NUP107-201ENST00000229179 6457 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
LRCH3Q96II8 RAB3IP-215ENST00000551641 2840 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
LRCH3Q96II8 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
LRCH3Q96II8 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
LRCH3Q96II8 Y_RNA.148-201ENST00000363557 117 ntBASIC8.11□□□□□ -1.11
LRCH3Q96II8 SNORA7B-201ENST00000384360 139 ntBASIC8.11□□□□□ -1.11
LRCH3Q96II8 IL6-203ENST00000401651 539 ntTSL 2 BASIC8.11□□□□□ -1.11
LRCH3Q96II8 RN7SKP268-201ENST00000411107 316 ntBASIC8.11□□□□□ -1.11
LRCH3Q96II8 AC013404.1-201ENST00000413068 249 ntBASIC8.11□□□□□ -1.11
LRCH3Q96II8 MTATP6P18-201ENST00000417994 673 ntBASIC8.11□□□□□ -1.11
LRCH3Q96II8 AC083875.1-201ENST00000419509 405 ntBASIC8.11□□□□□ -1.11
LRCH3Q96II8 AL589872.1-201ENST00000426602 288 ntBASIC8.11□□□□□ -1.11
LRCH3Q96II8 OR51AB1P-201ENST00000429046 620 ntBASIC8.11□□□□□ -1.11
LRCH3Q96II8 NANOGP6-201ENST00000429190 847 ntBASIC8.11□□□□□ -1.11
LRCH3Q96II8 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC8.11□□□□□ -1.11
LRCH3Q96II8 CBX1P1-201ENST00000440184 427 ntBASIC8.11□□□□□ -1.11
LRCH3Q96II8 AC245291.3-201ENST00000443400 292 ntBASIC8.11□□□□□ -1.11
LRCH3Q96II8 AC012512.1-201ENST00000446594 718 ntBASIC8.11□□□□□ -1.11
LRCH3Q96II8 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC8.11□□□□□ -1.11
LRCH3Q96II8 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC8.11□□□□□ -1.11
LRCH3Q96II8 AC112204.1-201ENST00000502591 103 ntBASIC8.11□□□□□ -1.11
LRCH3Q96II8 TECRP2-201ENST00000503270 928 ntBASIC8.11□□□□□ -1.11
LRCH3Q96II8 AC024558.1-201ENST00000505008 528 ntBASIC8.11□□□□□ -1.11
LRCH3Q96II8 FTH1P9-201ENST00000513251 355 ntBASIC8.11□□□□□ -1.11
LRCH3Q96II8 AC093816.1-201ENST00000515076 913 ntBASIC8.11□□□□□ -1.11
LRCH3Q96II8 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC8.11□□□□□ -1.11
LRCH3Q96II8 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC8.11□□□□□ -1.11
LRCH3Q96II8 AC122685.1-202ENST00000556750 555 ntTSL 2 BASIC8.11□□□□□ -1.11
LRCH3Q96II8 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC8.11□□□□□ -1.11
LRCH3Q96II8 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC8.11□□□□□ -1.11
LRCH3Q96II8 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC8.11□□□□□ -1.11
LRCH3Q96II8 ZNF561-AS1-208ENST00000592851 782 ntTSL 3 BASIC8.11□□□□□ -1.11
LRCH3Q96II8 CKS1BP3-201ENST00000600888 237 ntBASIC8.11□□□□□ -1.11
LRCH3Q96II8 AC092032.1-201ENST00000603090 165 ntBASIC8.11□□□□□ -1.11
LRCH3Q96II8 AC061709.1-202ENST00000615029 527 ntTSL 3 BASIC8.11□□□□□ -1.11
LRCH3Q96II8 OR1N1-202ENST00000619659 939 ntBASIC8.11□□□□□ -1.11
LRCH3Q96II8 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC8.11□□□□□ -1.11
LRCH3Q96II8 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
LRCH3Q96II8 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
LRCH3Q96II8 ZNF415-213ENST00000597503 2469 ntTSL 2 BASIC8.11□□□□□ -1.11
LRCH3Q96II8 VAMP3-201ENST00000054666 2205 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
LRCH3Q96II8 MS4A6A-203ENST00000426738 1736 ntTSL 5 BASIC8.11□□□□□ -1.11
LRCH3Q96II8 NHLRC2-201ENST00000369301 11051 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
LRCH3Q96II8 GMFB-209ENST00000616146 4125 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
LRCH3Q96II8 RRN3-203ENST00000429751 2198 ntTSL 2 BASIC8.11□□□□□ -1.11
LRCH3Q96II8 NEK10-201ENST00000295720 2871 ntTSL 2 BASIC8.11□□□□□ -1.11
LRCH3Q96II8 TMEM182-203ENST00000412401 3593 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
LRCH3Q96II8 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC8.11□□□□□ -1.11
LRCH3Q96II8 UNC79-201ENST00000256339 8400 ntAPPRIS P2 TSL 5 BASIC8.11□□□□□ -1.11
LRCH3Q96II8 ALG13-201ENST00000251943 3997 ntTSL 2 BASIC8.11□□□□□ -1.11
LRCH3Q96II8 PTPDC1-204ENST00000620992 4437 ntAPPRIS ALT2 TSL 2 BASIC8.11□□□□□ -1.11
LRCH3Q96II8 GATAD2B-203ENST00000634408 1825 ntTSL 5 BASIC8.1□□□□□ -1.11
LRCH3Q96II8 AC131392.2-201ENST00000505635 4332 ntBASIC8.1□□□□□ -1.11
LRCH3Q96II8 CHODL-203ENST00000400127 2239 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
LRCH3Q96II8 EIF4E3-204ENST00000425534 9949 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
LRCH3Q96II8 MMP20-201ENST00000260228 1956 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
LRCH3Q96II8 TMEM52B-203ENST00000381923 2601 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
LRCH3Q96II8 GPX5-201ENST00000412168 1540 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
LRCH3Q96II8 CAST-228ENST00000509903 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
LRCH3Q96II8 NUDT13-203ENST00000372997 1919 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
LRCH3Q96II8 IGF1R-206ENST00000558762 11726 ntAPPRIS ALT1 TSL 1 (best) BASIC8.1□□□□□ -1.11
LRCH3Q96II8 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
LRCH3Q96II8 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
LRCH3Q96II8 SNORA64.3-201ENST00000365647 134 ntBASIC8.1□□□□□ -1.11
LRCH3Q96II8 MIR99A-201ENST00000384906 81 ntBASIC8.1□□□□□ -1.11
LRCH3Q96II8 TRBV6-6-201ENST00000390371 388 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
LRCH3Q96II8 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
LRCH3Q96II8 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
LRCH3Q96II8 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
LRCH3Q96II8 FAUP2-201ENST00000394301 401 ntBASIC8.1□□□□□ -1.11
LRCH3Q96II8 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC8.1□□□□□ -1.11
LRCH3Q96II8 RPS12P24-201ENST00000412619 387 ntBASIC8.1□□□□□ -1.11
LRCH3Q96II8 AC062016.2-201ENST00000420950 676 ntBASIC8.1□□□□□ -1.11
LRCH3Q96II8 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC8.1□□□□□ -1.11
LRCH3Q96II8 AC005517.2-201ENST00000424673 553 ntBASIC8.1□□□□□ -1.11
LRCH3Q96II8 NIPA2P1-201ENST00000426223 976 ntBASIC8.1□□□□□ -1.11
LRCH3Q96II8 ATP5JP1-201ENST00000431631 322 ntBASIC8.1□□□□□ -1.11
LRCH3Q96II8 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC8.1□□□□□ -1.11
LRCH3Q96II8 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC8.1□□□□□ -1.11
LRCH3Q96II8 LINC00954-202ENST00000449086 2995 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
LRCH3Q96II8 AC104306.1-201ENST00000449702 371 ntBASIC8.1□□□□□ -1.11
LRCH3Q96II8 AC103563.5-201ENST00000455643 364 ntBASIC8.1□□□□□ -1.11
LRCH3Q96II8 RPSAP48-201ENST00000466509 889 ntBASIC8.1□□□□□ -1.11
LRCH3Q96II8 AC068587.1-201ENST00000483613 781 ntBASIC8.1□□□□□ -1.11
LRCH3Q96II8 SUMO2P17-201ENST00000504438 285 ntBASIC8.1□□□□□ -1.11
LRCH3Q96II8 AC025674.1-201ENST00000507074 324 ntBASIC8.1□□□□□ -1.11
LRCH3Q96II8 AC006390.1-201ENST00000508068 283 ntBASIC8.1□□□□□ -1.11
LRCH3Q96II8 PCBP2P3-201ENST00000509726 843 ntBASIC8.1□□□□□ -1.11
LRCH3Q96II8 AC012560.1-203ENST00000510550 595 ntTSL 4 BASIC8.1□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms