Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 CUL4AP1-201ENST00000514750 1863 ntBASIC8.34□□□□□ -1.07
VARS2Q5ST30 AL591543.1-202ENST00000642095 4149 ntBASIC8.34□□□□□ -1.07
VARS2Q5ST30 COL6A6-201ENST00000358511 9581 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.08
VARS2Q5ST30 SEL1L3-201ENST00000264868 4369 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
VARS2Q5ST30 ITK-201ENST00000422843 4528 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
VARS2Q5ST30 ACAA2-206ENST00000589432 1840 ntTSL 5 BASIC8.33□□□□□ -1.08
VARS2Q5ST30 NLRP3-206ENST00000391828 3853 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
VARS2Q5ST30 TNPO3-201ENST00000265388 4153 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
VARS2Q5ST30 AC009108.3-201ENST00000602739 3515 ntBASIC8.33□□□□□ -1.08
VARS2Q5ST30 MAP4-210ENST00000439356 2743 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
VARS2Q5ST30 NRG3-206ENST00000545131 2713 ntTSL 5 BASIC8.33□□□□□ -1.08
VARS2Q5ST30 TTC28-208ENST00000612946 11274 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
VARS2Q5ST30 OSBPL9P1-201ENST00000604744 1469 ntBASIC8.33□□□□□ -1.08
VARS2Q5ST30 ODF2-220ENST00000604420 3030 ntTSL 2 BASIC8.33□□□□□ -1.08
VARS2Q5ST30 PLAGL1-205ENST00000392307 6296 ntTSL 2 BASIC8.33□□□□□ -1.08
VARS2Q5ST30 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC8.33□□□□□ -1.08
VARS2Q5ST30 AL355103.1-201ENST00000557246 2226 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
VARS2Q5ST30 AC024132.1-201ENST00000382007 2509 ntTSL 2 BASIC8.33□□□□□ -1.08
VARS2Q5ST30 MAT1A-201ENST00000372213 3410 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
VARS2Q5ST30 CACNA1D-219ENST00000636938 6868 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
VARS2Q5ST30 CD86-201ENST00000264468 2634 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
VARS2Q5ST30 COL6A5-201ENST00000265379 9214 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
VARS2Q5ST30 SERPINB4-201ENST00000341074 1749 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
VARS2Q5ST30 RPL32P3-201ENST00000359025 275 ntBASIC8.33□□□□□ -1.08
VARS2Q5ST30 SGMS1-201ENST00000361543 1096 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
VARS2Q5ST30 RNU6-216P-201ENST00000363282 104 ntBASIC8.33□□□□□ -1.08
VARS2Q5ST30 RPL23AP32-201ENST00000395315 459 ntBASIC8.33□□□□□ -1.08
VARS2Q5ST30 AC092952.1-201ENST00000397646 1209 ntBASIC8.33□□□□□ -1.08
VARS2Q5ST30 RN7SKP117-201ENST00000410175 264 ntBASIC8.33□□□□□ -1.08
VARS2Q5ST30 HSD17B7P1-201ENST00000412419 1017 ntBASIC8.33□□□□□ -1.08
VARS2Q5ST30 AC009237.9-201ENST00000414800 347 ntBASIC8.33□□□□□ -1.08
VARS2Q5ST30 LINC02250-201ENST00000422117 2491 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
VARS2Q5ST30 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC8.33□□□□□ -1.08
VARS2Q5ST30 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC8.33□□□□□ -1.08
VARS2Q5ST30 AL512882.1-201ENST00000436086 832 ntBASIC8.33□□□□□ -1.08
VARS2Q5ST30 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC8.33□□□□□ -1.08
VARS2Q5ST30 RPSA-202ENST00000443003 1032 ntAPPRIS ALT1 TSL 1 (best) BASIC8.33□□□□□ -1.08
VARS2Q5ST30 RPS26P30-201ENST00000443431 335 ntBASIC8.33□□□□□ -1.08
VARS2Q5ST30 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC8.33□□□□□ -1.08
VARS2Q5ST30 SBDSP1-204ENST00000453858 737 ntBASIC8.33□□□□□ -1.08
VARS2Q5ST30 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC8.33□□□□□ -1.08
VARS2Q5ST30 AC234782.3-201ENST00000461229 433 ntBASIC8.33□□□□□ -1.08
VARS2Q5ST30 RPL39P38-201ENST00000467018 153 ntBASIC8.33□□□□□ -1.08
VARS2Q5ST30 UCK2-205ENST00000469256 753 ntTSL 3 BASIC8.33□□□□□ -1.08
VARS2Q5ST30 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
VARS2Q5ST30 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC8.33□□□□□ -1.08
VARS2Q5ST30 HMGB1P28-201ENST00000507778 552 ntBASIC8.33□□□□□ -1.08
VARS2Q5ST30 AC006070.1-201ENST00000508151 193 ntBASIC8.33□□□□□ -1.08
VARS2Q5ST30 AC116655.1-201ENST00000508324 901 ntBASIC8.33□□□□□ -1.08
VARS2Q5ST30 OR4D12P-201ENST00000509361 911 ntBASIC8.33□□□□□ -1.08
VARS2Q5ST30 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC8.33□□□□□ -1.08
VARS2Q5ST30 AC106774.2-201ENST00000510266 406 ntBASIC8.33□□□□□ -1.08
VARS2Q5ST30 AC087203.2-201ENST00000526502 1587 ntBASIC8.33□□□□□ -1.08
VARS2Q5ST30 REG4-204ENST00000530654 612 ntTSL 5 BASIC8.33□□□□□ -1.08
VARS2Q5ST30 AC008013.2-201ENST00000537555 348 ntTSL 5 BASIC8.33□□□□□ -1.08
VARS2Q5ST30 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC8.33□□□□□ -1.08
VARS2Q5ST30 AL845552.1-201ENST00000556820 323 ntBASIC8.33□□□□□ -1.08
VARS2Q5ST30 RN7SL689P-201ENST00000577215 297 ntBASIC8.33□□□□□ -1.08
VARS2Q5ST30 MIR3137-201ENST00000577367 75 ntBASIC8.33□□□□□ -1.08
VARS2Q5ST30 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC8.33□□□□□ -1.08
VARS2Q5ST30 MIR5192-201ENST00000579892 92 ntBASIC8.33□□□□□ -1.08
VARS2Q5ST30 ZNF567-204ENST00000588311 2042 ntTSL 2 BASIC8.33□□□□□ -1.08
VARS2Q5ST30 PTP4A2-218ENST00000602725 3353 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
VARS2Q5ST30 AL050403.2-202ENST00000603462 492 ntTSL 5 BASIC8.33□□□□□ -1.08
VARS2Q5ST30 MTND4LP5-201ENST00000605152 292 ntBASIC8.33□□□□□ -1.08
VARS2Q5ST30 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC8.33□□□□□ -1.08
VARS2Q5ST30 MKKS-204ENST00000639674 192 ntBASIC8.33□□□□□ -1.08
VARS2Q5ST30 PUM1-204ENST00000373747 5375 ntAPPRIS ALT1 TSL 5 BASIC8.33□□□□□ -1.08
VARS2Q5ST30 TRIM59-208ENST00000543469 4615 ntTSL 5 BASIC8.33□□□□□ -1.08
VARS2Q5ST30 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
VARS2Q5ST30 MTCO1P7-201ENST00000419523 1542 ntBASIC8.33□□□□□ -1.08
VARS2Q5ST30 NUSAP1-210ENST00000560177 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
VARS2Q5ST30 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC8.33□□□□□ -1.08
VARS2Q5ST30 AC079061.1-201ENST00000499579 3075 ntTSL 2 BASIC8.33□□□□□ -1.08
VARS2Q5ST30 THOC5-216ENST00000490103 4753 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
VARS2Q5ST30 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
VARS2Q5ST30 MAPK10-252ENST00000640970 2620 ntTSL 5 BASIC8.33□□□□□ -1.08
VARS2Q5ST30 AP001043.1-202ENST00000380931 5027 ntTSL 2 BASIC8.32□□□□□ -1.08
VARS2Q5ST30 BBS4-201ENST00000268057 2490 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
VARS2Q5ST30 MKL2-205ENST00000572567 2185 ntTSL 2 BASIC8.32□□□□□ -1.08
VARS2Q5ST30 BCL6-201ENST00000232014 2710 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
VARS2Q5ST30 GABRR1-202ENST00000435811 3106 ntTSL 2 BASIC8.32□□□□□ -1.08
VARS2Q5ST30 TRPS1-209ENST00000519674 3116 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
VARS2Q5ST30 GTF2H1-210ENST00000530496 1700 ntTSL 2 BASIC8.32□□□□□ -1.08
VARS2Q5ST30 TRIM53BP-201ENST00000532912 1720 ntBASIC8.32□□□□□ -1.08
VARS2Q5ST30 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
VARS2Q5ST30 GABRR1-203ENST00000454853 2820 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
VARS2Q5ST30 ASNS-214ENST00000455086 1588 ntTSL 2 BASIC8.32□□□□□ -1.08
VARS2Q5ST30 ST7-213ENST00000432298 1956 ntTSL 2 BASIC8.32□□□□□ -1.08
VARS2Q5ST30 AC124045.1-201ENST00000606008 1953 ntBASIC8.32□□□□□ -1.08
VARS2Q5ST30 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
VARS2Q5ST30 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
VARS2Q5ST30 LINC01268-201ENST00000434296 2755 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
VARS2Q5ST30 KIF1B-201ENST00000263934 6816 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
VARS2Q5ST30 CHODL-203ENST00000400127 2239 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
VARS2Q5ST30 TMEM52B-203ENST00000381923 2601 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
VARS2Q5ST30 KCNJ15-221ENST00000613499 3049 ntAPPRIS P1 TSL 4 BASIC8.32□□□□□ -1.08
VARS2Q5ST30 ZMYND8-203ENST00000352431 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
VARS2Q5ST30 RNU6-545P-201ENST00000362681 104 ntBASIC8.32□□□□□ -1.08
VARS2Q5ST30 Y_RNA.152-201ENST00000363578 100 ntBASIC8.32□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 140.2 ms