Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 SLC35A3-201ENST00000370153 5708 ntTSL 5 BASIC6.99□□□□□ -1.29
SOX1O00570 ZNF182-202ENST00000396965 3586 ntAPPRIS P4 TSL 2 BASIC6.99□□□□□ -1.29
SOX1O00570 PDXDC1-201ENST00000325823 1113 ntTSL 5 BASIC6.99□□□□□ -1.29
SOX1O00570 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
SOX1O00570 SNORA72.1-201ENST00000363485 129 ntBASIC6.99□□□□□ -1.29
SOX1O00570 RNU6-707P-201ENST00000364647 95 ntBASIC6.99□□□□□ -1.29
SOX1O00570 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC6.99□□□□□ -1.29
SOX1O00570 Y_RNA.408-201ENST00000383987 102 ntBASIC6.99□□□□□ -1.29
SOX1O00570 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC6.99□□□□□ -1.29
SOX1O00570 RNA5SP80-201ENST00000410475 111 ntBASIC6.99□□□□□ -1.29
SOX1O00570 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC6.99□□□□□ -1.29
SOX1O00570 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC6.99□□□□□ -1.29
SOX1O00570 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC6.99□□□□□ -1.29
SOX1O00570 OR51A5P-201ENST00000415429 942 ntBASIC6.99□□□□□ -1.29
SOX1O00570 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC6.99□□□□□ -1.29
SOX1O00570 PCBP2P1-201ENST00000437262 977 ntBASIC6.99□□□□□ -1.29
SOX1O00570 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.99□□□□□ -1.29
SOX1O00570 MTCO3P18-201ENST00000440206 761 ntBASIC6.99□□□□□ -1.29
SOX1O00570 AC004865.1-201ENST00000442276 1003 ntBASIC6.99□□□□□ -1.29
SOX1O00570 AL591363.1-201ENST00000450091 483 ntBASIC6.99□□□□□ -1.29
SOX1O00570 RN7SL727P-201ENST00000482164 296 ntBASIC6.99□□□□□ -1.29
SOX1O00570 CCDC11P1-201ENST00000503137 1162 ntBASIC6.99□□□□□ -1.29
SOX1O00570 AC098799.2-201ENST00000509466 868 ntBASIC6.99□□□□□ -1.29
SOX1O00570 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC6.99□□□□□ -1.29
SOX1O00570 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC6.99□□□□□ -1.29
SOX1O00570 AC023632.1-201ENST00000518463 375 ntBASIC6.99□□□□□ -1.29
SOX1O00570 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC6.99□□□□□ -1.29
SOX1O00570 AP003396.4-201ENST00000527574 265 ntBASIC6.99□□□□□ -1.29
SOX1O00570 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC6.99□□□□□ -1.29
SOX1O00570 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.99□□□□□ -1.29
SOX1O00570 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC6.99□□□□□ -1.29
SOX1O00570 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC6.99□□□□□ -1.29
SOX1O00570 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SOX1O00570 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC6.99□□□□□ -1.29
SOX1O00570 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC6.99□□□□□ -1.29
SOX1O00570 OR11J2P-201ENST00000555298 907 ntBASIC6.99□□□□□ -1.29
SOX1O00570 AL049870.4-201ENST00000555741 486 ntBASIC6.99□□□□□ -1.29
SOX1O00570 AC040162.2-201ENST00000573092 157 ntBASIC6.99□□□□□ -1.29
SOX1O00570 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC6.99□□□□□ -1.29
SOX1O00570 AC011591.1-201ENST00000591379 518 ntTSL 2 BASIC6.99□□□□□ -1.29
SOX1O00570 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC6.99□□□□□ -1.29
SOX1O00570 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.99□□□□□ -1.29
SOX1O00570 AL022154.1-201ENST00000604698 785 ntBASIC6.99□□□□□ -1.29
SOX1O00570 AP000238.1-201ENST00000608759 426 ntBASIC6.99□□□□□ -1.29
SOX1O00570 AC092954.2-201ENST00000609103 430 ntBASIC6.99□□□□□ -1.29
SOX1O00570 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
SOX1O00570 IGKV2OR2-10-201ENST00000613976 311 ntBASIC6.99□□□□□ -1.29
SOX1O00570 AC012150.2-201ENST00000621300 544 ntBASIC6.99□□□□□ -1.29
SOX1O00570 OR5H6-203ENST00000642105 978 ntBASIC6.99□□□□□ -1.29
SOX1O00570 UG0898H09-202ENST00000623646 7040 ntBASIC6.99□□□□□ -1.29
SOX1O00570 AL512662.1-201ENST00000624850 2251 ntBASIC6.99□□□□□ -1.29
SOX1O00570 AC109361.1-201ENST00000513220 3526 ntTSL 2 BASIC6.99□□□□□ -1.29
SOX1O00570 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SOX1O00570 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
SOX1O00570 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SOX1O00570 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
SOX1O00570 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SOX1O00570 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SOX1O00570 KYNUP3-201ENST00000574386 1341 ntBASIC6.99□□□□□ -1.29
SOX1O00570 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC6.99□□□□□ -1.29
SOX1O00570 FAM13A-AS1-202ENST00000511543 2453 ntTSL 2 BASIC6.99□□□□□ -1.29
SOX1O00570 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC6.99□□□□□ -1.29
SOX1O00570 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SOX1O00570 LINC00261-202ENST00000564492 4912 ntTSL 3 BASIC6.98□□□□□ -1.29
SOX1O00570 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
SOX1O00570 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SOX1O00570 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SOX1O00570 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SOX1O00570 ARHGAP42P5-201ENST00000548856 2936 ntBASIC6.98□□□□□ -1.29
SOX1O00570 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SOX1O00570 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC6.98□□□□□ -1.29
SOX1O00570 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
SOX1O00570 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
SOX1O00570 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC6.98□□□□□ -1.29
SOX1O00570 ADH6-203ENST00000394899 2802 ntAPPRIS ALT1 TSL 2 BASIC6.98□□□□□ -1.29
SOX1O00570 BBX-207ENST00000416476 2178 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SOX1O00570 ARG1-203ENST00000368087 1532 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SOX1O00570 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SOX1O00570 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SOX1O00570 AC009690.2-201ENST00000570175 3148 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SOX1O00570 PCDH15-226ENST00000613657 6329 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
SOX1O00570 NACA-203ENST00000454682 6629 ntTSL 5 BASIC6.98□□□□□ -1.29
SOX1O00570 THOC1-201ENST00000261600 2087 ntAPPRIS P2 TSL 1 (best) BASIC6.98□□□□□ -1.29
SOX1O00570 OR10J6P-201ENST00000289731 930 ntBASIC6.98□□□□□ -1.29
SOX1O00570 Y_RNA.61-201ENST00000362835 102 ntBASIC6.98□□□□□ -1.29
SOX1O00570 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.98□□□□□ -1.29
SOX1O00570 Y_RNA.554-201ENST00000384672 102 ntBASIC6.98□□□□□ -1.29
SOX1O00570 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
SOX1O00570 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SOX1O00570 AL139098.1-201ENST00000407291 389 ntBASIC6.98□□□□□ -1.29
SOX1O00570 MIR1203-201ENST00000408812 85 ntBASIC6.98□□□□□ -1.29
SOX1O00570 RNU2-41P-201ENST00000410991 178 ntBASIC6.98□□□□□ -1.29
SOX1O00570 RN7SKP279-201ENST00000411383 298 ntBASIC6.98□□□□□ -1.29
SOX1O00570 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC6.98□□□□□ -1.29
SOX1O00570 USP9YP6-201ENST00000413550 854 ntBASIC6.98□□□□□ -1.29
SOX1O00570 RPS7P13-201ENST00000413955 498 ntBASIC6.98□□□□□ -1.29
SOX1O00570 RNGTTP1-201ENST00000420965 728 ntBASIC6.98□□□□□ -1.29
SOX1O00570 MTND1P14-201ENST00000427400 950 ntBASIC6.98□□□□□ -1.29
SOX1O00570 BX323845.3-201ENST00000428215 527 ntBASIC6.98□□□□□ -1.29
SOX1O00570 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC6.98□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 151.2 ms