Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 CX3CL1-201ENST00000006053 3321 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
KRTAP3-3Q9BYR6 IGSF3-202ENST00000369483 7326 ntAPPRIS P4 TSL 5 BASIC5.4□□□□□ -1.54
KRTAP3-3Q9BYR6 PCBP2-205ENST00000447282 3077 ntTSL 5 BASIC5.4□□□□□ -1.54
KRTAP3-3Q9BYR6 LINC01163-202ENST00000630252 3086 ntTSL 2 BASIC5.4□□□□□ -1.54
KRTAP3-3Q9BYR6 SEC61A2-204ENST00000379020 2252 ntTSL 5 BASIC5.4□□□□□ -1.54
KRTAP3-3Q9BYR6 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
KRTAP3-3Q9BYR6 TACC2-208ENST00000369001 3685 ntTSL 2 BASIC5.4□□□□□ -1.54
KRTAP3-3Q9BYR6 TTC27-201ENST00000317907 2876 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
KRTAP3-3Q9BYR6 SYBU-202ENST00000399066 3435 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
KRTAP3-3Q9BYR6 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
KRTAP3-3Q9BYR6 SYTL2-201ENST00000316356 4293 ntAPPRIS ALT1 TSL 5 BASIC5.4□□□□□ -1.54
KRTAP3-3Q9BYR6 CD302-201ENST00000259053 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
KRTAP3-3Q9BYR6 SORCS1-203ENST00000369698 2638 ntTSL 5 BASIC5.4□□□□□ -1.54
KRTAP3-3Q9BYR6 KCND3-203ENST00000369697 7396 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.54
KRTAP3-3Q9BYR6 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC5.4□□□□□ -1.54
KRTAP3-3Q9BYR6 LINC00342-202ENST00000448494 2351 ntTSL 2 BASIC5.4□□□□□ -1.54
KRTAP3-3Q9BYR6 PMEPA1-201ENST00000265626 4627 ntTSL 3 BASIC5.4□□□□□ -1.54
KRTAP3-3Q9BYR6 SCML1-203ENST00000380045 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
KRTAP3-3Q9BYR6 LUZP1-201ENST00000302291 8898 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
KRTAP3-3Q9BYR6 ENSA-202ENST00000339643 633 ntTSL 2 BASIC5.4□□□□□ -1.54
KRTAP3-3Q9BYR6 WFDC2-202ENST00000339946 420 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
KRTAP3-3Q9BYR6 SYNGR4-201ENST00000344846 1000 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
KRTAP3-3Q9BYR6 Y_RNA.91-201ENST00000363042 107 ntBASIC5.4□□□□□ -1.54
KRTAP3-3Q9BYR6 RNU6-438P-201ENST00000365561 103 ntBASIC5.4□□□□□ -1.54
KRTAP3-3Q9BYR6 WFDC2-204ENST00000372676 614 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
KRTAP3-3Q9BYR6 SEPT6-205ENST00000394610 4694 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.54
KRTAP3-3Q9BYR6 MIR320B2-201ENST00000408479 138 ntBASIC5.4□□□□□ -1.54
KRTAP3-3Q9BYR6 CCDC103-203ENST00000410027 571 ntTSL 4 BASIC5.4□□□□□ -1.54
KRTAP3-3Q9BYR6 RN7SKP259-201ENST00000411066 333 ntBASIC5.4□□□□□ -1.54
KRTAP3-3Q9BYR6 FAM197Y6-201ENST00000420524 766 ntBASIC5.4□□□□□ -1.54
KRTAP3-3Q9BYR6 MRPL35P3-201ENST00000421557 364 ntBASIC5.4□□□□□ -1.54
KRTAP3-3Q9BYR6 AL163953.1-201ENST00000436530 726 ntTSL 3 BASIC5.4□□□□□ -1.54
KRTAP3-3Q9BYR6 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.4□□□□□ -1.54
KRTAP3-3Q9BYR6 LINC00265-202ENST00000448955 468 ntTSL 2 BASIC5.4□□□□□ -1.54
KRTAP3-3Q9BYR6 CHCHD4P3-201ENST00000455954 410 ntBASIC5.4□□□□□ -1.54
KRTAP3-3Q9BYR6 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.4□□□□□ -1.54
KRTAP3-3Q9BYR6 LILRB1-AS1-201ENST00000456337 554 ntTSL 4 BASIC5.4□□□□□ -1.54
KRTAP3-3Q9BYR6 RNU2-11P-201ENST00000459191 187 ntBASIC5.4□□□□□ -1.54
KRTAP3-3Q9BYR6 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
KRTAP3-3Q9BYR6 RN7SL79P-201ENST00000484117 290 ntBASIC5.4□□□□□ -1.54
KRTAP3-3Q9BYR6 RN7SL477P-201ENST00000488440 286 ntBASIC5.4□□□□□ -1.54
KRTAP3-3Q9BYR6 GUSBP8-201ENST00000502652 679 ntBASIC5.4□□□□□ -1.54
KRTAP3-3Q9BYR6 KLF5-205ENST00000539231 2951 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
KRTAP3-3Q9BYR6 AL049836.1-201ENST00000553270 539 ntTSL 3 BASIC5.4□□□□□ -1.54
KRTAP3-3Q9BYR6 AC099524.1-205ENST00000562180 674 ntTSL 5 BASIC5.4□□□□□ -1.54
KRTAP3-3Q9BYR6 AURKB-204ENST00000578549 939 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
KRTAP3-3Q9BYR6 AC105245.1-201ENST00000581934 244 ntBASIC5.4□□□□□ -1.54
KRTAP3-3Q9BYR6 RN7SL697P-201ENST00000582484 299 ntBASIC5.4□□□□□ -1.54
KRTAP3-3Q9BYR6 RN7SL246P-201ENST00000584467 296 ntBASIC5.4□□□□□ -1.54
KRTAP3-3Q9BYR6 SLC25A1P5-201ENST00000587610 783 ntBASIC5.4□□□□□ -1.54
KRTAP3-3Q9BYR6 AC067969.2-201ENST00000597015 570 ntTSL 4 BASIC5.4□□□□□ -1.54
KRTAP3-3Q9BYR6 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC5.4□□□□□ -1.54
KRTAP3-3Q9BYR6 AL390728.4-202ENST00000606173 430 ntTSL 3 BASIC5.4□□□□□ -1.54
KRTAP3-3Q9BYR6 MECP2-212ENST00000611468 603 ntTSL 5 BASIC5.4□□□□□ -1.54
KRTAP3-3Q9BYR6 AC025287.3-201ENST00000611726 501 ntBASIC5.4□□□□□ -1.54
KRTAP3-3Q9BYR6 NDUFC2-KCTD14-204ENST00000614236 386 ntTSL 5 BASIC5.4□□□□□ -1.54
KRTAP3-3Q9BYR6 ZNF619-202ENST00000429348 4104 ntTSL 5 BASIC5.4□□□□□ -1.55
KRTAP3-3Q9BYR6 PGM2-201ENST00000381967 3264 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
KRTAP3-3Q9BYR6 FAM69A-205ENST00000616709 2426 ntTSL 3 BASIC5.4□□□□□ -1.55
KRTAP3-3Q9BYR6 WDR33-202ENST00000393006 3574 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
KRTAP3-3Q9BYR6 VWA5B1-202ENST00000375079 3859 ntAPPRIS P5 TSL 5 BASIC5.4□□□□□ -1.55
KRTAP3-3Q9BYR6 CHERP-203ENST00000546361 4173 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
KRTAP3-3Q9BYR6 KDM4C-205ENST00000428870 3039 ntTSL 2 BASIC5.4□□□□□ -1.55
KRTAP3-3Q9BYR6 PIK3R3-201ENST00000262741 5609 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
KRTAP3-3Q9BYR6 PKNOX2-201ENST00000298282 3687 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
KRTAP3-3Q9BYR6 AC010547.5-201ENST00000561908 3677 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
KRTAP3-3Q9BYR6 LILRB4-203ENST00000391734 1602 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
KRTAP3-3Q9BYR6 FAM157A-203ENST00000634862 6083 ntTSL 5 BASIC5.4□□□□□ -1.55
KRTAP3-3Q9BYR6 BCLAF1-223ENST00000628517 2512 ntTSL 5 BASIC5.4□□□□□ -1.55
KRTAP3-3Q9BYR6 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
KRTAP3-3Q9BYR6 EFCAB5-208ENST00000536908 2826 ntTSL 2 BASIC5.4□□□□□ -1.55
KRTAP3-3Q9BYR6 MERTK-207ENST00000616902 3104 ntTSL 5 BASIC5.4□□□□□ -1.55
KRTAP3-3Q9BYR6 C6orf222-201ENST00000437635 3736 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
KRTAP3-3Q9BYR6 TMC3-201ENST00000359440 4641 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.55
KRTAP3-3Q9BYR6 GFOD2-202ENST00000602279 5507 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
KRTAP3-3Q9BYR6 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
KRTAP3-3Q9BYR6 PCDHAC1-202ENST00000409700 4077 ntAPPRIS ALT2 BASIC5.4□□□□□ -1.55
KRTAP3-3Q9BYR6 SLC6A2-206ENST00000567238 3160 ntTSL 2 BASIC5.4□□□□□ -1.55
KRTAP3-3Q9BYR6 KLHL7-AS1-201ENST00000419813 2564 ntTSL 2 BASIC5.4□□□□□ -1.55
KRTAP3-3Q9BYR6 SLC26A5-211ENST00000432958 2588 ntTSL 5 BASIC5.4□□□□□ -1.55
KRTAP3-3Q9BYR6 AP002008.3-201ENST00000528614 2587 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
KRTAP3-3Q9BYR6 JAK1-201ENST00000342505 5047 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
KRTAP3-3Q9BYR6 PDGFD-202ENST00000393158 3801 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.55
KRTAP3-3Q9BYR6 AC046168.1-201ENST00000561283 3814 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
KRTAP3-3Q9BYR6 DCT-201ENST00000377028 5064 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
KRTAP3-3Q9BYR6 SCN4B-201ENST00000324727 4484 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
KRTAP3-3Q9BYR6 PSMD2-206ENST00000439383 2633 ntTSL 2 BASIC5.4□□□□□ -1.55
KRTAP3-3Q9BYR6 COL8A1-201ENST00000261037 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
KRTAP3-3Q9BYR6 KDM5D-202ENST00000382806 5134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
KRTAP3-3Q9BYR6 ICAM1-201ENST00000264832 3252 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
KRTAP3-3Q9BYR6 PIGN-223ENST00000638369 4205 ntTSL 5 BASIC5.4□□□□□ -1.55
KRTAP3-3Q9BYR6 CUX1-221ENST00000622516 2990 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
KRTAP3-3Q9BYR6 TNRC6C-201ENST00000301624 9632 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
KRTAP3-3Q9BYR6 VPS13A-204ENST00000376634 10269 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
KRTAP3-3Q9BYR6 PRAMENP-203ENST00000548391 1445 ntBASIC5.4□□□□□ -1.55
KRTAP3-3Q9BYR6 FAM131B-203ENST00000409408 5856 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
KRTAP3-3Q9BYR6 MERTK-201ENST00000295408 3954 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.55
KRTAP3-3Q9BYR6 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 AL662907.2-201ENST00000624339 3448 ntBASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 154.2 ms