Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LHX1P48742 THAP12P4-201ENST00000528321 2266 ntBASIC5.53□□□□□ -1.52
LHX1P48742 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
LHX1P48742 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LHX1P48742 AL136116.2-201ENST00000404020 785 ntBASIC5.53□□□□□ -1.52
LHX1P48742 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC5.53□□□□□ -1.52
LHX1P48742 ARAFP1-201ENST00000422172 605 ntBASIC5.53□□□□□ -1.52
LHX1P48742 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
LHX1P48742 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.53□□□□□ -1.52
LHX1P48742 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.53□□□□□ -1.52
LHX1P48742 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.53□□□□□ -1.52
LHX1P48742 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.53□□□□□ -1.52
LHX1P48742 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.53□□□□□ -1.52
LHX1P48742 GAPDHP58-201ENST00000438477 1006 ntBASIC5.53□□□□□ -1.52
LHX1P48742 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.53□□□□□ -1.52
LHX1P48742 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.53□□□□□ -1.52
LHX1P48742 MED28P3-201ENST00000444288 531 ntBASIC5.53□□□□□ -1.52
LHX1P48742 AC092647.2-201ENST00000452998 253 ntBASIC5.53□□□□□ -1.52
LHX1P48742 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC5.53□□□□□ -1.52
LHX1P48742 RN7SL329P-201ENST00000467740 299 ntBASIC5.53□□□□□ -1.52
LHX1P48742 BX284632.1-201ENST00000478218 541 ntBASIC5.53□□□□□ -1.52
LHX1P48742 AC090114.3-201ENST00000479267 829 ntBASIC5.53□□□□□ -1.52
LHX1P48742 AC012123.2-201ENST00000485809 248 ntBASIC5.53□□□□□ -1.52
LHX1P48742 RN7SL814P-201ENST00000487715 300 ntBASIC5.53□□□□□ -1.52
LHX1P48742 AC004453.1-201ENST00000487895 408 ntBASIC5.53□□□□□ -1.52
LHX1P48742 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.53□□□□□ -1.52
LHX1P48742 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.53□□□□□ -1.52
LHX1P48742 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.53□□□□□ -1.52
LHX1P48742 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.53□□□□□ -1.52
LHX1P48742 AC125612.1-201ENST00000547580 377 ntBASIC5.53□□□□□ -1.52
LHX1P48742 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.53□□□□□ -1.52
LHX1P48742 AC023389.2-201ENST00000580031 955 ntBASIC5.53□□□□□ -1.52
LHX1P48742 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.53□□□□□ -1.52
LHX1P48742 AL021707.7-201ENST00000607991 416 ntBASIC5.53□□□□□ -1.52
LHX1P48742 AL118508.4-201ENST00000624142 1176 ntBASIC5.53□□□□□ -1.52
LHX1P48742 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.53□□□□□ -1.52
LHX1P48742 CASC19-222ENST00000641321 1173 ntBASIC5.53□□□□□ -1.52
LHX1P48742 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LHX1P48742 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.53□□□□□ -1.52
LHX1P48742 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.53□□□□□ -1.52
LHX1P48742 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
LHX1P48742 SCARNA15-201ENST00000607520 4325 ntBASIC5.53□□□□□ -1.52
LHX1P48742 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LHX1P48742 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.53□□□□□ -1.52
LHX1P48742 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
LHX1P48742 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LHX1P48742 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.53□□□□□ -1.52
LHX1P48742 AC012078.1-201ENST00000405035 1646 ntBASIC5.52□□□□□ -1.53
LHX1P48742 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
LHX1P48742 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.52□□□□□ -1.53
LHX1P48742 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.52□□□□□ -1.53
LHX1P48742 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
LHX1P48742 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.52□□□□□ -1.53
LHX1P48742 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
LHX1P48742 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
LHX1P48742 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.52□□□□□ -1.53
LHX1P48742 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
LHX1P48742 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LHX1P48742 OR5T3-201ENST00000303059 1023 ntBASIC5.52□□□□□ -1.53
LHX1P48742 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
LHX1P48742 OR1L6-202ENST00000373684 1044 ntBASIC5.52□□□□□ -1.53
LHX1P48742 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
LHX1P48742 RNA5SP241-201ENST00000391326 114 ntBASIC5.52□□□□□ -1.53
LHX1P48742 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC5.52□□□□□ -1.53
LHX1P48742 DPPA2P2-201ENST00000418220 897 ntBASIC5.52□□□□□ -1.53
LHX1P48742 AC093162.1-201ENST00000419682 124 ntBASIC5.52□□□□□ -1.53
LHX1P48742 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.52□□□□□ -1.53
LHX1P48742 DDX39BP1-205ENST00000422507 192 ntBASIC5.52□□□□□ -1.53
LHX1P48742 HSPD1P12-201ENST00000429127 1069 ntBASIC5.52□□□□□ -1.53
LHX1P48742 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.52□□□□□ -1.53
LHX1P48742 MTND2P40-201ENST00000436718 841 ntBASIC5.52□□□□□ -1.53
LHX1P48742 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.52□□□□□ -1.53
LHX1P48742 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.52□□□□□ -1.53
LHX1P48742 KNOP1P3-201ENST00000446933 426 ntBASIC5.52□□□□□ -1.53
LHX1P48742 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
LHX1P48742 IMPA1P1-201ENST00000510718 842 ntBASIC5.52□□□□□ -1.53
LHX1P48742 RN7SKP260-201ENST00000516907 149 ntBASIC5.52□□□□□ -1.53
LHX1P48742 AC013701.1-201ENST00000522657 465 ntBASIC5.52□□□□□ -1.53
LHX1P48742 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.52□□□□□ -1.53
LHX1P48742 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC5.52□□□□□ -1.53
LHX1P48742 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.52□□□□□ -1.53
LHX1P48742 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LHX1P48742 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.52□□□□□ -1.53
LHX1P48742 QTRT1P1-201ENST00000604344 1078 ntBASIC5.52□□□□□ -1.53
LHX1P48742 AL445222.1-201ENST00000607259 628 ntBASIC5.52□□□□□ -1.53
LHX1P48742 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC5.52□□□□□ -1.53
LHX1P48742 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC5.52□□□□□ -1.53
LHX1P48742 MIR6839-201ENST00000620425 113 ntBASIC5.52□□□□□ -1.53
LHX1P48742 AL139254.3-201ENST00000641097 674 ntBASIC5.52□□□□□ -1.53
LHX1P48742 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
LHX1P48742 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
LHX1P48742 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
LHX1P48742 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
LHX1P48742 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
LHX1P48742 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
LHX1P48742 AC140134.1-201ENST00000511830 3544 ntBASIC5.52□□□□□ -1.53
LHX1P48742 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
LHX1P48742 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LHX1P48742 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
LHX1P48742 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 165.3 ms