Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 LINC00622-201ENST00000562811 1570 ntBASIC8.16□□□□□ -1.1
RNF40O75150 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC8.16□□□□□ -1.1
RNF40O75150 RN7SL697P-201ENST00000582484 299 ntBASIC8.16□□□□□ -1.1
RNF40O75150 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC8.16□□□□□ -1.1
RNF40O75150 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC8.16□□□□□ -1.1
RNF40O75150 AC022106.2-201ENST00000620114 757 ntBASIC8.16□□□□□ -1.1
RNF40O75150 ZNF334-206ENST00000625284 2495 ntAPPRIS ALT2 TSL 2 BASIC8.16□□□□□ -1.1
RNF40O75150 LINC01206-228ENST00000628718 871 ntTSL 5 BASIC8.16□□□□□ -1.1
RNF40O75150 ZNF667-208ENST00000629654 3265 ntTSL 5 BASIC8.16□□□□□ -1.1
RNF40O75150 ENSA-215ENST00000638926 360 ntTSL 5 BASIC8.16□□□□□ -1.1
RNF40O75150 MKKS-204ENST00000639674 192 ntBASIC8.16□□□□□ -1.1
RNF40O75150 CASC19-221ENST00000641309 1382 ntBASIC8.16□□□□□ -1.1
RNF40O75150 SAMMSON-222ENST00000641901 2727 ntBASIC8.16□□□□□ -1.1
RNF40O75150 AC138915.4-201ENST00000565549 4147 ntBASIC8.16□□□□□ -1.1
RNF40O75150 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
RNF40O75150 NXPE3-203ENST00000477909 3450 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
RNF40O75150 PSMC2-203ENST00000435765 3054 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
RNF40O75150 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
RNF40O75150 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
RNF40O75150 AL133279.3-201ENST00000563140 2352 ntBASIC8.15□□□□□ -1.1
RNF40O75150 AP001157.1-201ENST00000550837 2339 ntBASIC8.15□□□□□ -1.1
RNF40O75150 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC8.15□□□□□ -1.1
RNF40O75150 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
RNF40O75150 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
RNF40O75150 AC116366.1-201ENST00000443093 3730 ntTSL 5 BASIC8.15□□□□□ -1.1
RNF40O75150 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
RNF40O75150 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
RNF40O75150 AC007923.2-201ENST00000584218 1591 ntBASIC8.15□□□□□ -1.1
RNF40O75150 ZNF101-208ENST00000592502 4627 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
RNF40O75150 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
RNF40O75150 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
RNF40O75150 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC8.15□□□□□ -1.1
RNF40O75150 RNA5SP355-201ENST00000365317 135 ntBASIC8.15□□□□□ -1.1
RNF40O75150 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC8.15□□□□□ -1.1
RNF40O75150 SP140-202ENST00000373645 814 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
RNF40O75150 MIR525-201ENST00000384978 85 ntBASIC8.15□□□□□ -1.1
RNF40O75150 RPL23A-203ENST00000394938 688 ntTSL 2 BASIC8.15□□□□□ -1.1
RNF40O75150 RPA3-203ENST00000401447 414 ntTSL 3 BASIC8.15□□□□□ -1.1
RNF40O75150 AL592114.1-201ENST00000403842 483 ntBASIC8.15□□□□□ -1.1
RNF40O75150 RPSAP44-201ENST00000406712 884 ntBASIC8.15□□□□□ -1.1
RNF40O75150 RN7SKP106-201ENST00000410832 272 ntBASIC8.15□□□□□ -1.1
RNF40O75150 AP001042.1-201ENST00000416842 487 ntTSL 3 BASIC8.15□□□□□ -1.1
RNF40O75150 AL713965.1-201ENST00000421166 230 ntTSL 5 BASIC8.15□□□□□ -1.1
RNF40O75150 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC8.15□□□□□ -1.1
RNF40O75150 GAPDHP55-201ENST00000423136 803 ntBASIC8.15□□□□□ -1.1
RNF40O75150 RPL7P57-201ENST00000423238 740 ntBASIC8.15□□□□□ -1.1
RNF40O75150 SKP1P3-201ENST00000429280 487 ntBASIC8.15□□□□□ -1.1
RNF40O75150 RPL31P35-201ENST00000431058 377 ntBASIC8.15□□□□□ -1.1
RNF40O75150 AC000362.1-201ENST00000433725 425 ntBASIC8.15□□□□□ -1.1
RNF40O75150 AC015983.1-201ENST00000441577 373 ntBASIC8.15□□□□□ -1.1
RNF40O75150 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
RNF40O75150 RPS29P5-201ENST00000452777 171 ntBASIC8.15□□□□□ -1.1
RNF40O75150 AC234771.3-201ENST00000454984 622 ntBASIC8.15□□□□□ -1.1
RNF40O75150 RN7SL308P-201ENST00000464971 297 ntBASIC8.15□□□□□ -1.1
RNF40O75150 AC018816.1-206ENST00000474544 455 ntTSL 3 BASIC8.15□□□□□ -1.1
RNF40O75150 AC018475.1-201ENST00000478358 465 ntBASIC8.15□□□□□ -1.1
RNF40O75150 AC106774.2-201ENST00000510266 406 ntBASIC8.15□□□□□ -1.1
RNF40O75150 AC092336.1-201ENST00000510562 415 ntTSL 3 BASIC8.15□□□□□ -1.1
RNF40O75150 RNA5SP216-201ENST00000516111 123 ntBASIC8.15□□□□□ -1.1
RNF40O75150 Y_RNA.672-201ENST00000516289 104 ntBASIC8.15□□□□□ -1.1
RNF40O75150 RNU6-445P-201ENST00000516949 107 ntBASIC8.15□□□□□ -1.1
RNF40O75150 RNU6-1137P-201ENST00000517073 99 ntBASIC8.15□□□□□ -1.1
RNF40O75150 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC8.15□□□□□ -1.1
RNF40O75150 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC8.15□□□□□ -1.1
RNF40O75150 AC018523.1-201ENST00000534211 512 ntBASIC8.15□□□□□ -1.1
RNF40O75150 MAL2-203ENST00000534619 578 ntTSL 4 BASIC8.15□□□□□ -1.1
RNF40O75150 AL121594.2-201ENST00000541658 472 ntBASIC8.15□□□□□ -1.1
RNF40O75150 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC8.15□□□□□ -1.1
RNF40O75150 AC090287.1-201ENST00000578374 291 ntBASIC8.15□□□□□ -1.1
RNF40O75150 RN7SL42P-201ENST00000579786 294 ntBASIC8.15□□□□□ -1.1
RNF40O75150 AC093484.4-201ENST00000583934 461 ntTSL 5 BASIC8.15□□□□□ -1.1
RNF40O75150 ZNF561-AS1-208ENST00000592851 782 ntTSL 3 BASIC8.15□□□□□ -1.1
RNF40O75150 AL589863.1-201ENST00000595383 631 ntBASIC8.15□□□□□ -1.1
RNF40O75150 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC8.15□□□□□ -1.1
RNF40O75150 AC080078.3-201ENST00000605407 463 ntBASIC8.15□□□□□ -1.1
RNF40O75150 AL627309.6-201ENST00000606857 840 ntBASIC8.15□□□□□ -1.1
RNF40O75150 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC8.15□□□□□ -1.1
RNF40O75150 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC8.15□□□□□ -1.1
RNF40O75150 U4.1-201ENST00000620349 87 ntBASIC8.15□□□□□ -1.1
RNF40O75150 AP003068.4-201ENST00000623192 802 ntBASIC8.15□□□□□ -1.1
RNF40O75150 AC090617.10-201ENST00000624308 134 ntBASIC8.15□□□□□ -1.1
RNF40O75150 LINC01125-248ENST00000627284 700 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
RNF40O75150 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC8.15□□□□□ -1.1
RNF40O75150 AC063952.1-203ENST00000634410 658 ntBASIC8.15□□□□□ -1.1
RNF40O75150 MTND4LP32-201ENST00000636111 270 ntBASIC8.15□□□□□ -1.1
RNF40O75150 PRPS1L1-202ENST00000638645 957 ntAPPRIS P2 BASIC8.15□□□□□ -1.1
RNF40O75150 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC8.15□□□□□ -1.11
RNF40O75150 FOPNL-206ENST00000573968 2039 ntTSL 2 BASIC8.15□□□□□ -1.11
RNF40O75150 TP53BP1-202ENST00000382039 6015 ntTSL 5 BASIC8.15□□□□□ -1.11
RNF40O75150 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.11
RNF40O75150 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC8.15□□□□□ -1.11
RNF40O75150 MAPK10-296ENST00000641283 2826 ntAPPRIS P2 BASIC8.15□□□□□ -1.11
RNF40O75150 IL18RAP-202ENST00000409369 1890 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
RNF40O75150 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
RNF40O75150 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
RNF40O75150 LINC00598-208ENST00000617777 2551 ntTSL 2 BASIC8.15□□□□□ -1.11
RNF40O75150 EML5-201ENST00000380664 5910 ntTSL 5 BASIC8.14□□□□□ -1.11
RNF40O75150 NT5C2-203ENST00000404739 3365 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
RNF40O75150 CCDC63-204ENST00000552694 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
RNF40O75150 PSMD6-AS2-201ENST00000472046 2456 ntTSL 2 BASIC8.14□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 162.1 ms