Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 UQCRBP1-201ENST00000421129 336 ntBASIC8.26□□□□□ -1.09
IFT140Q96RY7 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC8.26□□□□□ -1.09
IFT140Q96RY7 AP001781.1-201ENST00000530977 207 ntBASIC8.26□□□□□ -1.09
IFT140Q96RY7 AC027667.1-201ENST00000545814 304 ntBASIC8.26□□□□□ -1.09
IFT140Q96RY7 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
IFT140Q96RY7 AL356608.1-201ENST00000610034 820 ntBASIC8.26□□□□□ -1.09
IFT140Q96RY7 ZYXP1-201ENST00000617638 118 ntBASIC8.26□□□□□ -1.09
IFT140Q96RY7 LRRC37A16P-202ENST00000586022 3725 ntBASIC8.25□□□□□ -1.09
IFT140Q96RY7 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC8.25□□□□□ -1.09
IFT140Q96RY7 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
IFT140Q96RY7 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC8.25□□□□□ -1.09
IFT140Q96RY7 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC8.25□□□□□ -1.09
IFT140Q96RY7 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC8.25□□□□□ -1.09
IFT140Q96RY7 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC8.25□□□□□ -1.09
IFT140Q96RY7 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
IFT140Q96RY7 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
IFT140Q96RY7 RNA5SP171-201ENST00000391071 115 ntBASIC8.25□□□□□ -1.09
IFT140Q96RY7 Z95327.1-201ENST00000446082 482 ntBASIC8.25□□□□□ -1.09
IFT140Q96RY7 PSAT1P4-201ENST00000466500 526 ntBASIC8.25□□□□□ -1.09
IFT140Q96RY7 AC023424.1-201ENST00000496058 459 ntBASIC8.25□□□□□ -1.09
IFT140Q96RY7 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC8.25□□□□□ -1.09
IFT140Q96RY7 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC8.25□□□□□ -1.09
IFT140Q96RY7 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC8.24□□□□□ -1.09
IFT140Q96RY7 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
IFT140Q96RY7 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
IFT140Q96RY7 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
IFT140Q96RY7 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC8.24□□□□□ -1.09
IFT140Q96RY7 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC8.24□□□□□ -1.09
IFT140Q96RY7 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
IFT140Q96RY7 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC8.24□□□□□ -1.09
IFT140Q96RY7 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC8.24□□□□□ -1.09
IFT140Q96RY7 RPL36AP36-201ENST00000418616 301 ntBASIC8.24□□□□□ -1.09
IFT140Q96RY7 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
IFT140Q96RY7 RPL7AP52-201ENST00000458096 790 ntBASIC8.24□□□□□ -1.09
IFT140Q96RY7 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC8.24□□□□□ -1.09
IFT140Q96RY7 HMGN1P9-201ENST00000515212 298 ntBASIC8.24□□□□□ -1.09
IFT140Q96RY7 ARL6IP1P1-201ENST00000545836 610 ntBASIC8.24□□□□□ -1.09
IFT140Q96RY7 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC8.24□□□□□ -1.09
IFT140Q96RY7 MIR3138-201ENST00000585238 82 ntBASIC8.24□□□□□ -1.09
IFT140Q96RY7 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC8.24□□□□□ -1.09
IFT140Q96RY7 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC8.24□□□□□ -1.09
IFT140Q96RY7 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
IFT140Q96RY7 ECM1P2-201ENST00000503354 1577 ntBASIC8.24□□□□□ -1.09
IFT140Q96RY7 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
IFT140Q96RY7 SAMMSON-210ENST00000641260 1308 ntBASIC8.23□□□□□ -1.09
IFT140Q96RY7 SMG1P7-201ENST00000565246 2704 ntBASIC8.23□□□□□ -1.09
IFT140Q96RY7 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
IFT140Q96RY7 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
IFT140Q96RY7 AL731566.1-201ENST00000620490 1937 ntBASIC8.23□□□□□ -1.09
IFT140Q96RY7 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC8.23□□□□□ -1.09
IFT140Q96RY7 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC8.23□□□□□ -1.09
IFT140Q96RY7 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC8.23□□□□□ -1.09
IFT140Q96RY7 RN7SKP145-201ENST00000363291 303 ntBASIC8.23□□□□□ -1.09
IFT140Q96RY7 AL358176.3-201ENST00000420757 454 ntBASIC8.23□□□□□ -1.09
IFT140Q96RY7 AC022133.1-201ENST00000490961 571 ntBASIC8.23□□□□□ -1.09
IFT140Q96RY7 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
IFT140Q96RY7 BUD31P1-201ENST00000521828 359 ntBASIC8.23□□□□□ -1.09
IFT140Q96RY7 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC8.23□□□□□ -1.09
IFT140Q96RY7 DCN-218ENST00000551354 2924 ntTSL 3 BASIC8.23□□□□□ -1.09
IFT140Q96RY7 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC8.23□□□□□ -1.09
IFT140Q96RY7 AC073091.2-201ENST00000603205 907 ntBASIC8.23□□□□□ -1.09
IFT140Q96RY7 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC8.23□□□□□ -1.09
IFT140Q96RY7 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
IFT140Q96RY7 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC8.23□□□□□ -1.09
IFT140Q96RY7 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC8.23□□□□□ -1.09
IFT140Q96RY7 COBLL1-203ENST00000392717 9523 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
IFT140Q96RY7 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
IFT140Q96RY7 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC8.23□□□□□ -1.09
IFT140Q96RY7 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
IFT140Q96RY7 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
IFT140Q96RY7 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC8.23□□□□□ -1.09
IFT140Q96RY7 AC120338.1-201ENST00000625074 1541 ntBASIC8.22□□□□□ -1.09
IFT140Q96RY7 CASC19-255ENST00000641733 1385 ntBASIC8.22□□□□□ -1.09
IFT140Q96RY7 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
IFT140Q96RY7 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
IFT140Q96RY7 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
IFT140Q96RY7 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC8.22□□□□□ -1.09
IFT140Q96RY7 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
IFT140Q96RY7 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC8.22□□□□□ -1.09
IFT140Q96RY7 RBPJP2-201ENST00000618187 1444 ntBASIC8.22□□□□□ -1.09
IFT140Q96RY7 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC8.22□□□□□ -1.09
IFT140Q96RY7 SNORA70C-201ENST00000384538 135 ntBASIC8.22□□□□□ -1.09
IFT140Q96RY7 RPL21P108-201ENST00000413857 481 ntBASIC8.22□□□□□ -1.09
IFT140Q96RY7 AC006946.1-201ENST00000429106 328 ntBASIC8.22□□□□□ -1.09
IFT140Q96RY7 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC8.22□□□□□ -1.09
IFT140Q96RY7 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
IFT140Q96RY7 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC8.22□□□□□ -1.09
IFT140Q96RY7 FHP1-201ENST00000442741 703 ntBASIC8.22□□□□□ -1.09
IFT140Q96RY7 CDV3-208ENST00000511392 554 ntTSL 5 BASIC8.22□□□□□ -1.09
IFT140Q96RY7 AC007016.1-201ENST00000512110 244 ntBASIC8.22□□□□□ -1.09
IFT140Q96RY7 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC8.22□□□□□ -1.09
IFT140Q96RY7 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC8.22□□□□□ -1.09
IFT140Q96RY7 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC8.22□□□□□ -1.09
IFT140Q96RY7 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC8.22□□□□□ -1.09
IFT140Q96RY7 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC8.22□□□□□ -1.09
IFT140Q96RY7 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
IFT140Q96RY7 FAM27B-201ENST00000610601 213 ntBASIC8.22□□□□□ -1.09
IFT140Q96RY7 AC100847.1-201ENST00000611316 481 ntBASIC8.22□□□□□ -1.09
IFT140Q96RY7 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC8.22□□□□□ -1.09
IFT140Q96RY7 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms