Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 AL022311.1-201ENST00000623726 19416 ntBASIC5.71□□□□□ -1.5
VPS50Q96JG6 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
VPS50Q96JG6 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.71□□□□□ -1.5
VPS50Q96JG6 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
VPS50Q96JG6 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
VPS50Q96JG6 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
VPS50Q96JG6 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.71□□□□□ -1.5
VPS50Q96JG6 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
VPS50Q96JG6 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
VPS50Q96JG6 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
VPS50Q96JG6 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.71□□□□□ -1.5
VPS50Q96JG6 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
VPS50Q96JG6 GVINP1-202ENST00000531871 7271 ntBASIC5.7□□□□□ -1.5
VPS50Q96JG6 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
VPS50Q96JG6 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
VPS50Q96JG6 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.7□□□□□ -1.5
VPS50Q96JG6 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
VPS50Q96JG6 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VPS50Q96JG6 AC097461.1-201ENST00000568928 2821 ntBASIC5.7□□□□□ -1.5
VPS50Q96JG6 ZNF29P-201ENST00000225587 168 ntBASIC5.7□□□□□ -1.5
VPS50Q96JG6 RNU5E-10P-201ENST00000363506 118 ntBASIC5.7□□□□□ -1.5
VPS50Q96JG6 RNU105B-201ENST00000364478 208 ntBASIC5.7□□□□□ -1.5
VPS50Q96JG6 RN7SKP269-201ENST00000365545 319 ntBASIC5.7□□□□□ -1.5
VPS50Q96JG6 RNU6-31P-201ENST00000384388 108 ntBASIC5.7□□□□□ -1.5
VPS50Q96JG6 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC5.7□□□□□ -1.5
VPS50Q96JG6 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
VPS50Q96JG6 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
VPS50Q96JG6 RPS3AP2-201ENST00000407190 754 ntBASIC5.7□□□□□ -1.5
VPS50Q96JG6 TATDN1P1-201ENST00000414123 891 ntBASIC5.7□□□□□ -1.5
VPS50Q96JG6 AC079809.1-201ENST00000415468 276 ntBASIC5.7□□□□□ -1.5
VPS50Q96JG6 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC5.7□□□□□ -1.5
VPS50Q96JG6 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
VPS50Q96JG6 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.7□□□□□ -1.5
VPS50Q96JG6 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.7□□□□□ -1.5
VPS50Q96JG6 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC5.7□□□□□ -1.5
VPS50Q96JG6 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
VPS50Q96JG6 EXOSC3P1-201ENST00000448649 500 ntBASIC5.7□□□□□ -1.5
VPS50Q96JG6 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.7□□□□□ -1.5
VPS50Q96JG6 AC016027.4-201ENST00000450866 277 ntBASIC5.7□□□□□ -1.5
VPS50Q96JG6 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC5.7□□□□□ -1.5
VPS50Q96JG6 NXT1P1-201ENST00000458481 316 ntBASIC5.7□□□□□ -1.5
VPS50Q96JG6 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.7□□□□□ -1.5
VPS50Q96JG6 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
VPS50Q96JG6 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.7□□□□□ -1.5
VPS50Q96JG6 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VPS50Q96JG6 RPL7P51-201ENST00000490532 749 ntBASIC5.7□□□□□ -1.5
VPS50Q96JG6 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
VPS50Q96JG6 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC5.7□□□□□ -1.5
VPS50Q96JG6 AC133963.2-201ENST00000513686 578 ntBASIC5.7□□□□□ -1.5
VPS50Q96JG6 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.7□□□□□ -1.5
VPS50Q96JG6 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC5.7□□□□□ -1.5
VPS50Q96JG6 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.7□□□□□ -1.5
VPS50Q96JG6 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.7□□□□□ -1.5
VPS50Q96JG6 AP001804.2-201ENST00000533932 910 ntBASIC5.7□□□□□ -1.5
VPS50Q96JG6 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.7□□□□□ -1.5
VPS50Q96JG6 NANOGNBP2-201ENST00000544753 553 ntBASIC5.7□□□□□ -1.5
VPS50Q96JG6 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC5.7□□□□□ -1.5
VPS50Q96JG6 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC5.7□□□□□ -1.5
VPS50Q96JG6 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.7□□□□□ -1.5
VPS50Q96JG6 CBX3P2-202ENST00000583365 535 ntBASIC5.7□□□□□ -1.5
VPS50Q96JG6 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.7□□□□□ -1.5
VPS50Q96JG6 AC005224.3-201ENST00000584683 2140 ntBASIC5.7□□□□□ -1.5
VPS50Q96JG6 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.7□□□□□ -1.5
VPS50Q96JG6 AC008521.2-201ENST00000591021 259 ntBASIC5.7□□□□□ -1.5
VPS50Q96JG6 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.7□□□□□ -1.5
VPS50Q96JG6 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.7□□□□□ -1.5
VPS50Q96JG6 AC141002.1-201ENST00000607025 279 ntBASIC5.7□□□□□ -1.5
VPS50Q96JG6 AC022106.1-201ENST00000612834 766 ntBASIC5.7□□□□□ -1.5
VPS50Q96JG6 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.7□□□□□ -1.5
VPS50Q96JG6 CYCSP41-201ENST00000616920 296 ntBASIC5.7□□□□□ -1.5
VPS50Q96JG6 AC026124.2-201ENST00000621847 656 ntBASIC5.7□□□□□ -1.5
VPS50Q96JG6 AC093875.1-201ENST00000623688 504 ntBASIC5.7□□□□□ -1.5
VPS50Q96JG6 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC5.7□□□□□ -1.5
VPS50Q96JG6 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.7□□□□□ -1.5
VPS50Q96JG6 AC008691.1-209ENST00000642094 814 ntBASIC5.7□□□□□ -1.5
VPS50Q96JG6 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
VPS50Q96JG6 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.7□□□□□ -1.5
VPS50Q96JG6 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
VPS50Q96JG6 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
VPS50Q96JG6 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
VPS50Q96JG6 AP001029.2-203ENST00000589795 4910 ntBASIC5.7□□□□□ -1.5
VPS50Q96JG6 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VPS50Q96JG6 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.7□□□□□ -1.5
VPS50Q96JG6 AL133243.2-201ENST00000610331 1621 ntBASIC5.7□□□□□ -1.5
VPS50Q96JG6 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
VPS50Q96JG6 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VPS50Q96JG6 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VPS50Q96JG6 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
VPS50Q96JG6 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
VPS50Q96JG6 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.69□□□□□ -1.5
VPS50Q96JG6 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
VPS50Q96JG6 AL034546.1-201ENST00000623740 3693 ntBASIC5.69□□□□□ -1.5
VPS50Q96JG6 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
VPS50Q96JG6 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
VPS50Q96JG6 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
VPS50Q96JG6 AC024587.1-201ENST00000505925 2157 ntBASIC5.69□□□□□ -1.5
VPS50Q96JG6 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
VPS50Q96JG6 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
VPS50Q96JG6 RNU6-298P-201ENST00000390888 96 ntBASIC5.69□□□□□ -1.5
VPS50Q96JG6 HMGB3P19-201ENST00000403971 560 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms