RNA–Protein interactions for RNA: ENST00000448649.1

EXOSC3P1-201, Transcript of exosome component 3 pseudogene 1, humanhuman

BASIC

Gene EXOSC3P1, Length 500 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3P1-201ENST00000448649 AEBP2Q6ZN18 517 aaPredicted RBP26.21■■□□□ 1.79
EXOSC3P1-201ENST00000448649 CHIC1Q5VXU3 224 aa25.68■■□□□ 1.7
EXOSC3P1-201ENST00000448649 PHF23Q9BUL5 403 aaPredicted RBP22.53■■□□□ 1.2
EXOSC3P1-201ENST00000448649 SENP3Q9H4L4 574 aaPredicted RBP22.34■■□□□ 1.17
EXOSC3P1-201ENST00000448649 PLPPR3Q6T4P5 718 aa20.91■□□□□ 0.94
EXOSC3P1-201ENST00000448649 FOXD1Q16676 465 aa20.67■□□□□ 0.9
EXOSC3P1-201ENST00000448649 PPP6R1Q9UPN7 881 aa19.87■□□□□ 0.77
EXOSC3P1-201ENST00000448649 ADRA2BP18089 450 aa19.86■□□□□ 0.77
EXOSC3P1-201ENST00000448649 PIAS4Q8N2W9 510 aaPredicted RBP19.52■□□□□ 0.72
EXOSC3P1-201ENST00000448649 MSH5O43196 834 aa19.13■□□□□ 0.65
EXOSC3P1-201ENST00000448649 PPP4R3CPQ6ZMV5 832 aa18.39■□□□□ 0.53
EXOSC3P1-201ENST00000448649 SCAF1Q9H7N4 1312 aaKnown RBP18.31■□□□□ 0.52
EXOSC3P1-201ENST00000448649 MAPK8IP2Q13387 824 aaPredicted RBP18■□□□□ 0.47
EXOSC3P1-201ENST00000448649 NCBP3Q53F19 620 aaKnown RBP17.98■□□□□ 0.47
EXOSC3P1-201ENST00000448649 KCNA4P22459 653 aa17.94■□□□□ 0.46
EXOSC3P1-201ENST00000448649 CNKSR2Q8WXI2 1034 aa17.9■□□□□ 0.46
EXOSC3P1-201ENST00000448649 DMRT2Q9Y5R5 561 aa17.81■□□□□ 0.44
EXOSC3P1-201ENST00000448649 NPM3O75607 178 aaKnown RBP17.63■□□□□ 0.41
EXOSC3P1-201ENST00000448649 RNF216Q9NWF9 866 aaPredicted RBP17.55■□□□□ 0.4
EXOSC3P1-201ENST00000448649 HOXD11P31277 338 aaPredicted RBP17.45■□□□□ 0.38
EXOSC3P1-201ENST00000448649 POTEDQ86YR6 584 aa17.32■□□□□ 0.36
EXOSC3P1-201ENST00000448649 DNAJC5BQ9UF47 199 aa17.17■□□□□ 0.34
EXOSC3P1-201ENST00000448649 SLC4A1APQ9BWU0 796 aaKnown RBP17.13■□□□□ 0.33
EXOSC3P1-201ENST00000448649 DCAF8L1A6NGE4 600 aa17.04■□□□□ 0.32
EXOSC3P1-201ENST00000448649 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.65■□□□□ 0.26
EXOSC3P1-201ENST00000448649 SLC4A2P04920 1241 aa16.62■□□□□ 0.25
EXOSC3P1-201ENST00000448649 EHMT2Q96KQ7 1210 aa16.61■□□□□ 0.25
EXOSC3P1-201ENST00000448649 FOXD4L1Q9NU39 408 aa16.56■□□□□ 0.24
EXOSC3P1-201ENST00000448649 ZBTB22O15209 634 aa16.46■□□□□ 0.23
EXOSC3P1-201ENST00000448649 CSRNP3Q8WYN3 585 aa16.43■□□□□ 0.22
EXOSC3P1-201ENST00000448649 MYCNP04198 464 aaPredicted RBP16.34■□□□□ 0.21
EXOSC3P1-201ENST00000448649 RNF39Q9H2S5 420 aa16.34■□□□□ 0.21
EXOSC3P1-201ENST00000448649 U3KPZ7 1027 aaPredicted RBP16.34■□□□□ 0.21
EXOSC3P1-201ENST00000448649 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.25■□□□□ 0.19
EXOSC3P1-201ENST00000448649 HNRNPUL2Q1KMD3 747 aaKnown RBP16.25■□□□□ 0.19
EXOSC3P1-201ENST00000448649 C1QBPQ07021 282 aaKnown RBP16.2■□□□□ 0.18
EXOSC3P1-201ENST00000448649 SAMD1Q6SPF0 538 aaPredicted RBP16.16■□□□□ 0.18
EXOSC3P1-201ENST00000448649 APLP2Q06481 763 aa16.1■□□□□ 0.17
EXOSC3P1-201ENST00000448649 ATXN8OSP0DMR3 200 aa16.02■□□□□ 0.16
EXOSC3P1-201ENST00000448649 CACNB1Q02641 598 aaPredicted RBP15.93■□□□□ 0.14
EXOSC3P1-201ENST00000448649 SPINK5Q9NQ38 1064 aaPredicted RBP15.85■□□□□ 0.13
EXOSC3P1-201ENST00000448649 CAPN15O75808 1086 aa15.84■□□□□ 0.13
EXOSC3P1-201ENST00000448649 ZNF219Q9P2Y4 722 aaPredicted RBP15.81■□□□□ 0.12
EXOSC3P1-201ENST00000448649 ATF5Q9Y2D1 282 aaPredicted RBP15.81■□□□□ 0.12
EXOSC3P1-201ENST00000448649 TRHP20396 242 aaPredicted RBP15.76■□□□□ 0.11
EXOSC3P1-201ENST00000448649 DSG3P32926 999 aa15.56■□□□□ 0.08
EXOSC3P1-201ENST00000448649 POLA2Q14181 598 aa15.51■□□□□ 0.07
EXOSC3P1-201ENST00000448649 ABCB7O75027 752 aa15.5■□□□□ 0.07
EXOSC3P1-201ENST00000448649 ZBTB12Q9Y330 459 aaPredicted RBP15.33■□□□□ 0.04
EXOSC3P1-201ENST00000448649 FBLN2P98095 1184 aa15.26■□□□□ 0.03
EXOSC3P1-201ENST00000448649 MKRN4PQ13434 485 aaPredicted RBP15.13■□□□□ 0.01
EXOSC3P1-201ENST00000448649 OSCARQ8IYS5 282 aa14.96□□□□□ -0.01
EXOSC3P1-201ENST00000448649 RBM42Q9BTD8 480 aaKnown RBP14.9□□□□□ -0.02
EXOSC3P1-201ENST00000448649 SPDYE2BA6NHP3 402 aa14.89□□□□□ -0.03
EXOSC3P1-201ENST00000448649 SPDYE6P0CI01 402 aa14.89□□□□□ -0.03
EXOSC3P1-201ENST00000448649 SPDYE2Q495Y8 402 aa14.89□□□□□ -0.03
EXOSC3P1-201ENST00000448649 FKBP8Q14318 412 aa14.88□□□□□ -0.03
EXOSC3P1-201ENST00000448649 SPDYE4A6NLX3 237 aa14.87□□□□□ -0.03
EXOSC3P1-201ENST00000448649 ZNF692Q9BU19 519 aaPredicted RBP14.82□□□□□ -0.04
EXOSC3P1-201ENST00000448649 SSUH2Q9Y2M2 353 aa14.73□□□□□ -0.05
EXOSC3P1-201ENST00000448649 AKT1S1Q96B36 256 aa14.69□□□□□ -0.06
EXOSC3P1-201ENST00000448649 PABPN1Q86U42 306 aaKnown RBP eCLIP14.6□□□□□ -0.07
EXOSC3P1-201ENST00000448649 PROM2Q8N271 834 aa14.6□□□□□ -0.07
EXOSC3P1-201ENST00000448649 REM2Q8IYK8 340 aaPredicted RBP14.52□□□□□ -0.09
EXOSC3P1-201ENST00000448649 SPDYE1Q8NFV5 336 aaPredicted RBP14.45□□□□□ -0.1
EXOSC3P1-201ENST00000448649 STAG3Q9UJ98 1225 aa14.44□□□□□ -0.1
EXOSC3P1-201ENST00000448649 FBXO3Q9UK99 471 aa14.43□□□□□ -0.1
EXOSC3P1-201ENST00000448649 CLEC11AQ9Y240 323 aa14.35□□□□□ -0.11
EXOSC3P1-201ENST00000448649 PITPNM1O00562 1244 aa14.33□□□□□ -0.12
EXOSC3P1-201ENST00000448649 PRR29P0C7W0 189 aa14.25□□□□□ -0.13
EXOSC3P1-201ENST00000448649 CHRDL2Q6WN34 429 aa14.21□□□□□ -0.13
EXOSC3P1-201ENST00000448649 VASPP50552 380 aaPredicted RBP14.16□□□□□ -0.14
EXOSC3P1-201ENST00000448649 PLEKHG5O94827 1062 aa14.11□□□□□ -0.15
EXOSC3P1-201ENST00000448649 MIER1Q8N108 512 aa14.11□□□□□ -0.15
EXOSC3P1-201ENST00000448649 PLCD3Q8N3E9 789 aa14.1□□□□□ -0.15
EXOSC3P1-201ENST00000448649 FXR2P51116 673 aaKnown RBP eCLIP14.09□□□□□ -0.15
EXOSC3P1-201ENST00000448649 PIP4P2Q8N4L2 257 aa14.02□□□□□ -0.17
EXOSC3P1-201ENST00000448649 CREBZFQ9NS37 354 aa14.02□□□□□ -0.17
EXOSC3P1-201ENST00000448649 PRKAR2AP13861 404 aaKnown RBP14□□□□□ -0.17
EXOSC3P1-201ENST00000448649 ZBTB47Q9UFB7 747 aaPredicted RBP14□□□□□ -0.17
EXOSC3P1-201ENST00000448649 CHADLQ6NUI6 762 aa13.96□□□□□ -0.17
EXOSC3P1-201ENST00000448649 KLHL34Q8N239 644 aa13.95□□□□□ -0.18
EXOSC3P1-201ENST00000448649 IFNLR1Q8IU57 520 aaPredicted RBP13.94□□□□□ -0.18
EXOSC3P1-201ENST00000448649 NPM1P06748 294 aaKnown RBP eCLIP13.87□□□□□ -0.19
EXOSC3P1-201ENST00000448649 MNX1P50219 401 aaPredicted RBP13.87□□□□□ -0.19
EXOSC3P1-201ENST00000448649 FARP1Q9Y4F1 1045 aaPredicted RBP13.87□□□□□ -0.19
EXOSC3P1-201ENST00000448649 SPOCK2Q92563 424 aa13.83□□□□□ -0.2
EXOSC3P1-201ENST00000448649 POTEHQ6S545 545 aa13.75□□□□□ -0.21
EXOSC3P1-201ENST00000448649 NUBP1P53384 320 aa13.71□□□□□ -0.21
EXOSC3P1-201ENST00000448649 FAM212AQ96EL1 285 aa13.65□□□□□ -0.22
EXOSC3P1-201ENST00000448649 PAK3O75914 559 aaPredicted RBP13.64□□□□□ -0.23
EXOSC3P1-201ENST00000448649 GSE1Q14687 1217 aa13.63□□□□□ -0.23
EXOSC3P1-201ENST00000448649 AMER1Q5JTC6 1135 aaPredicted RBP13.63□□□□□ -0.23
EXOSC3P1-201ENST00000448649 RASEFQ8IZ41 740 aa13.63□□□□□ -0.23
EXOSC3P1-201ENST00000448649 DCAF8Q5TAQ9 597 aa13.62□□□□□ -0.23
EXOSC3P1-201ENST00000448649 HAX1O00165 279 aa13.6□□□□□ -0.23
EXOSC3P1-201ENST00000448649 CD44P16070 742 aaKnown RBP13.6□□□□□ -0.23
EXOSC3P1-201ENST00000448649 C19orf67A6NJJ6 358 aa13.59□□□□□ -0.23
EXOSC3P1-201ENST00000448649 CIZ1Q9ULV3 898 aaPredicted RBP13.59□□□□□ -0.23
EXOSC3P1-201ENST00000448649 TSPYL2Q9H2G4 693 aaPredicted RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 174.1 ms