Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 AC015820.1-201ENST00000473882 321 ntBASIC7.89□□□□□ -1.15
SCUBE3Q8IX30 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC7.89□□□□□ -1.15
SCUBE3Q8IX30 RN7SL153P-201ENST00000486501 292 ntBASIC7.89□□□□□ -1.15
SCUBE3Q8IX30 AMTN-202ENST00000504451 761 ntAPPRIS ALT1 TSL 1 (best) BASIC7.89□□□□□ -1.15
SCUBE3Q8IX30 AC098799.3-201ENST00000506095 438 ntBASIC7.89□□□□□ -1.15
SCUBE3Q8IX30 AC021220.1-201ENST00000507445 630 ntBASIC7.89□□□□□ -1.15
SCUBE3Q8IX30 AC092336.1-201ENST00000510562 415 ntTSL 3 BASIC7.89□□□□□ -1.15
SCUBE3Q8IX30 LY96-202ENST00000518893 430 ntTSL 3 BASIC7.89□□□□□ -1.15
SCUBE3Q8IX30 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC7.89□□□□□ -1.15
SCUBE3Q8IX30 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC7.89□□□□□ -1.15
SCUBE3Q8IX30 ARL6IP1P1-201ENST00000545836 610 ntBASIC7.89□□□□□ -1.15
SCUBE3Q8IX30 DPPA3P2-202ENST00000557188 1219 ntBASIC7.89□□□□□ -1.15
SCUBE3Q8IX30 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC7.89□□□□□ -1.15
SCUBE3Q8IX30 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC7.89□□□□□ -1.15
SCUBE3Q8IX30 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC7.89□□□□□ -1.15
SCUBE3Q8IX30 MIR4307-201ENST00000582802 84 ntBASIC7.89□□□□□ -1.15
SCUBE3Q8IX30 AC118757.1-202ENST00000589074 609 ntTSL 2 BASIC7.89□□□□□ -1.15
SCUBE3Q8IX30 AL589863.1-201ENST00000595383 631 ntBASIC7.89□□□□□ -1.15
SCUBE3Q8IX30 AC012065.3-201ENST00000602736 439 ntBASIC7.89□□□□□ -1.15
SCUBE3Q8IX30 AC092807.2-201ENST00000609367 243 ntBASIC7.89□□□□□ -1.15
SCUBE3Q8IX30 AL161734.1-201ENST00000609720 557 ntBASIC7.89□□□□□ -1.15
SCUBE3Q8IX30 AP003789.1-201ENST00000617737 605 ntBASIC7.89□□□□□ -1.15
SCUBE3Q8IX30 AC099667.1-201ENST00000624222 469 ntBASIC7.89□□□□□ -1.15
SCUBE3Q8IX30 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC7.89□□□□□ -1.15
SCUBE3Q8IX30 AC233280.20-201ENST00000637412 416 ntBASIC7.89□□□□□ -1.15
SCUBE3Q8IX30 MR1-208ENST00000614012 7860 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
SCUBE3Q8IX30 CD163-203ENST00000432237 3701 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
SCUBE3Q8IX30 ZNF544-206ENST00000596652 2818 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
SCUBE3Q8IX30 ZNF544-217ENST00000600220 2837 ntAPPRIS ALT2 TSL 3 BASIC7.89□□□□□ -1.15
SCUBE3Q8IX30 IQGAP1-201ENST00000268182 7233 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
SCUBE3Q8IX30 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
SCUBE3Q8IX30 UBR1-202ENST00000546274 3332 ntTSL 2 BASIC7.89□□□□□ -1.15
SCUBE3Q8IX30 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC7.89□□□□□ -1.15
SCUBE3Q8IX30 NBEA-202ENST00000379922 3794 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
SCUBE3Q8IX30 MAPK10-298ENST00000641297 3040 ntAPPRIS P2 BASIC7.89□□□□□ -1.15
SCUBE3Q8IX30 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
SCUBE3Q8IX30 OPALIN-203ENST00000393871 3545 ntTSL 2 BASIC7.89□□□□□ -1.15
SCUBE3Q8IX30 DTNA-205ENST00000399113 2232 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
SCUBE3Q8IX30 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
SCUBE3Q8IX30 LINC00622-201ENST00000562811 1570 ntBASIC7.88□□□□□ -1.15
SCUBE3Q8IX30 GRIA4-206ENST00000525187 2822 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
SCUBE3Q8IX30 MT-CO1-201ENST00000361624 1542 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
SCUBE3Q8IX30 MTCO1P12-201ENST00000414273 1543 ntBASIC7.88□□□□□ -1.15
SCUBE3Q8IX30 VEZF1P1-201ENST00000423931 1541 ntBASIC7.88□□□□□ -1.15
SCUBE3Q8IX30 UBAP2-204ENST00000379238 4289 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
SCUBE3Q8IX30 AC009690.2-201ENST00000570175 3148 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
SCUBE3Q8IX30 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
SCUBE3Q8IX30 ERBB4-202ENST00000342788 12136 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
SCUBE3Q8IX30 ESRRG-221ENST00000493603 5304 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
SCUBE3Q8IX30 EEF1A1P5-201ENST00000436459 1389 ntBASIC7.88□□□□□ -1.15
SCUBE3Q8IX30 DDX50P1-201ENST00000438163 2400 ntBASIC7.88□□□□□ -1.15
SCUBE3Q8IX30 MAP3K7CL-203ENST00000341618 1855 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
SCUBE3Q8IX30 ACAA2-206ENST00000589432 1840 ntTSL 5 BASIC7.88□□□□□ -1.15
SCUBE3Q8IX30 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC7.88□□□□□ -1.15
SCUBE3Q8IX30 RN7SKP63-201ENST00000363187 301 ntBASIC7.88□□□□□ -1.15
SCUBE3Q8IX30 RNU1-39P-201ENST00000383897 165 ntBASIC7.88□□□□□ -1.15
SCUBE3Q8IX30 RPL7-203ENST00000396466 762 ntTSL 3 BASIC7.88□□□□□ -1.15
SCUBE3Q8IX30 PSMA6P1-201ENST00000400275 741 ntBASIC7.88□□□□□ -1.15
SCUBE3Q8IX30 AL589647.1-201ENST00000402485 466 ntBASIC7.88□□□□□ -1.15
SCUBE3Q8IX30 HYKK-202ENST00000408962 847 ntTSL 5 BASIC7.88□□□□□ -1.15
SCUBE3Q8IX30 RN7SKP131-201ENST00000410698 301 ntBASIC7.88□□□□□ -1.15
SCUBE3Q8IX30 AC023141.1-201ENST00000419418 379 ntBASIC7.88□□□□□ -1.15
SCUBE3Q8IX30 GAPDHP73-201ENST00000423411 1007 ntBASIC7.88□□□□□ -1.15
SCUBE3Q8IX30 RPS27AP6-201ENST00000427962 448 ntBASIC7.88□□□□□ -1.15
SCUBE3Q8IX30 RPL23AP16-201ENST00000441715 421 ntBASIC7.88□□□□□ -1.15
SCUBE3Q8IX30 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC7.88□□□□□ -1.15
SCUBE3Q8IX30 ZNF385D-AS2-202ENST00000448980 370 ntTSL 3 BASIC7.88□□□□□ -1.15
SCUBE3Q8IX30 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC7.88□□□□□ -1.15
SCUBE3Q8IX30 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC7.88□□□□□ -1.15
SCUBE3Q8IX30 RPL34P22-201ENST00000468193 318 ntBASIC7.88□□□□□ -1.15
SCUBE3Q8IX30 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC7.88□□□□□ -1.15
SCUBE3Q8IX30 RPL17P2-201ENST00000491913 451 ntBASIC7.88□□□□□ -1.15
SCUBE3Q8IX30 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC7.88□□□□□ -1.15
SCUBE3Q8IX30 AC009869.1-201ENST00000530418 528 ntTSL 4 BASIC7.88□□□□□ -1.15
SCUBE3Q8IX30 REG4-204ENST00000530654 612 ntTSL 5 BASIC7.88□□□□□ -1.15
SCUBE3Q8IX30 MAL2-203ENST00000534619 578 ntTSL 4 BASIC7.88□□□□□ -1.15
SCUBE3Q8IX30 PRR13-204ENST00000547368 688 ntAPPRIS ALT2 TSL 3 BASIC7.88□□□□□ -1.15
SCUBE3Q8IX30 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC7.88□□□□□ -1.15
SCUBE3Q8IX30 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC7.88□□□□□ -1.15
SCUBE3Q8IX30 DRAIC-206ENST00000559029 309 ntTSL 3 BASIC7.88□□□□□ -1.15
SCUBE3Q8IX30 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
SCUBE3Q8IX30 AC099518.1-201ENST00000568032 841 ntTSL 3 BASIC7.88□□□□□ -1.15
SCUBE3Q8IX30 AC090236.2-201ENST00000587933 1101 ntBASIC7.88□□□□□ -1.15
SCUBE3Q8IX30 HMGN1P30-201ENST00000589286 268 ntBASIC7.88□□□□□ -1.15
SCUBE3Q8IX30 SSX2B-202ENST00000596480 1291 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
SCUBE3Q8IX30 CKS1BP3-201ENST00000600888 237 ntBASIC7.88□□□□□ -1.15
SCUBE3Q8IX30 AL050403.2-202ENST00000603462 492 ntTSL 5 BASIC7.88□□□□□ -1.15
SCUBE3Q8IX30 AL390058.1-201ENST00000603834 629 ntBASIC7.88□□□□□ -1.15
SCUBE3Q8IX30 AC010591.1-201ENST00000603941 649 ntBASIC7.88□□□□□ -1.15
SCUBE3Q8IX30 AC080078.3-201ENST00000605407 463 ntBASIC7.88□□□□□ -1.15
SCUBE3Q8IX30 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC7.88□□□□□ -1.15
SCUBE3Q8IX30 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
SCUBE3Q8IX30 ABCA6-201ENST00000284425 5300 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
SCUBE3Q8IX30 MAP4K4-203ENST00000347699 3792 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
SCUBE3Q8IX30 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC7.88□□□□□ -1.15
SCUBE3Q8IX30 RTL3-201ENST00000321110 2648 ntAPPRIS P1 TSL 2 BASIC7.88□□□□□ -1.15
SCUBE3Q8IX30 LARGE-AS1-203ENST00000438159 2618 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
SCUBE3Q8IX30 SYCP1-202ENST00000369522 3522 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
SCUBE3Q8IX30 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
SCUBE3Q8IX30 KIF11-201ENST00000260731 4860 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms