Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
AP3S2P59780 AL354854.1-201ENST00000455940 1363 ntBASIC4.41□□□□□ -1.7
AP3S2P59780 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
AP3S2P59780 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.41□□□□□ -1.7
AP3S2P59780 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.41□□□□□ -1.7
AP3S2P59780 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.41□□□□□ -1.7
AP3S2P59780 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
AP3S2P59780 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
AP3S2P59780 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.41□□□□□ -1.7
AP3S2P59780 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.41□□□□□ -1.7
AP3S2P59780 KARSP1-201ENST00000451871 1752 ntBASIC4.41□□□□□ -1.7
AP3S2P59780 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
AP3S2P59780 RNA5SP433-201ENST00000364491 114 ntBASIC4.41□□□□□ -1.7
AP3S2P59780 ATP5F1P2-201ENST00000398143 760 ntBASIC4.41□□□□□ -1.7
AP3S2P59780 AL589994.1-201ENST00000404962 340 ntBASIC4.41□□□□□ -1.7
AP3S2P59780 SLC20A1P1-201ENST00000413906 956 ntBASIC4.41□□□□□ -1.7
AP3S2P59780 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC4.41□□□□□ -1.7
AP3S2P59780 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.41□□□□□ -1.7
AP3S2P59780 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC4.41□□□□□ -1.7
AP3S2P59780 ATP5LP2-201ENST00000440646 311 ntBASIC4.41□□□□□ -1.7
AP3S2P59780 AL357520.1-201ENST00000441557 453 ntBASIC4.41□□□□□ -1.7
AP3S2P59780 TRMT2B-AS1-201ENST00000443801 205 ntTSL 5 BASIC4.41□□□□□ -1.7
AP3S2P59780 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC4.41□□□□□ -1.7
AP3S2P59780 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
AP3S2P59780 GAPDHP25-201ENST00000447061 1001 ntBASIC4.41□□□□□ -1.7
AP3S2P59780 AC009963.3-201ENST00000458090 486 ntBASIC4.41□□□□□ -1.7
AP3S2P59780 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
AP3S2P59780 PGBD4P4-201ENST00000509673 613 ntBASIC4.41□□□□□ -1.7
AP3S2P59780 DYNLL1P4-201ENST00000549314 266 ntBASIC4.41□□□□□ -1.7
AP3S2P59780 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC4.41□□□□□ -1.7
AP3S2P59780 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC4.41□□□□□ -1.7
AP3S2P59780 AC091304.5-201ENST00000568969 158 ntBASIC4.41□□□□□ -1.7
AP3S2P59780 CYCSP40-201ENST00000575927 294 ntBASIC4.41□□□□□ -1.7
AP3S2P59780 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC4.41□□□□□ -1.7
AP3S2P59780 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC4.41□□□□□ -1.7
AP3S2P59780 BNIP3P35-201ENST00000604530 490 ntBASIC4.41□□□□□ -1.7
AP3S2P59780 U91328.4-201ENST00000608919 517 ntBASIC4.41□□□□□ -1.7
AP3S2P59780 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC4.41□□□□□ -1.7
AP3S2P59780 MIR6070-201ENST00000613967 103 ntBASIC4.41□□□□□ -1.7
AP3S2P59780 BMS1P21-201ENST00000634565 365 ntBASIC4.41□□□□□ -1.7
AP3S2P59780 AC087565.3-203ENST00000641018 837 ntBASIC4.41□□□□□ -1.7
AP3S2P59780 AC008691.1-209ENST00000642094 814 ntBASIC4.41□□□□□ -1.7
AP3S2P59780 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.41□□□□□ -1.7
AP3S2P59780 UGT2B26P-201ENST00000508672 1613 ntBASIC4.41□□□□□ -1.7
AP3S2P59780 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
AP3S2P59780 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
AP3S2P59780 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
AP3S2P59780 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
AP3S2P59780 DHX9P1-201ENST00000436565 3076 ntBASIC4.41□□□□□ -1.7
AP3S2P59780 LINC01109-201ENST00000603837 3081 ntBASIC4.41□□□□□ -1.7
AP3S2P59780 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
AP3S2P59780 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
AP3S2P59780 SSXP3-201ENST00000442971 1300 ntBASIC4.41□□□□□ -1.7
AP3S2P59780 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
AP3S2P59780 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
AP3S2P59780 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
AP3S2P59780 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.7
AP3S2P59780 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
AP3S2P59780 SALL4P2-201ENST00000423288 2910 ntBASIC4.4□□□□□ -1.7
AP3S2P59780 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
AP3S2P59780 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
AP3S2P59780 CASC19-206ENST00000641028 1430 ntBASIC4.4□□□□□ -1.7
AP3S2P59780 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
AP3S2P59780 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
AP3S2P59780 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
AP3S2P59780 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.4□□□□□ -1.71
AP3S2P59780 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC4.4□□□□□ -1.71
AP3S2P59780 TINAG-203ENST00000370869 782 ntTSL 3 BASIC4.4□□□□□ -1.71
AP3S2P59780 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
AP3S2P59780 SEPT7P2-202ENST00000398921 823 ntBASIC4.4□□□□□ -1.71
AP3S2P59780 YWHAZP6-201ENST00000399764 738 ntBASIC4.4□□□□□ -1.71
AP3S2P59780 LSM5-203ENST00000409782 649 ntTSL 5 BASIC4.4□□□□□ -1.71
AP3S2P59780 AC245060.4-201ENST00000413293 1121 ntBASIC4.4□□□□□ -1.71
AP3S2P59780 TBX18-AS1-201ENST00000423086 421 ntTSL 3 BASIC4.4□□□□□ -1.71
AP3S2P59780 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.4□□□□□ -1.71
AP3S2P59780 GSTM5P1-201ENST00000434751 660 ntBASIC4.4□□□□□ -1.71
AP3S2P59780 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.4□□□□□ -1.71
AP3S2P59780 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.4□□□□□ -1.71
AP3S2P59780 AL450996.1-201ENST00000445574 1202 ntBASIC4.4□□□□□ -1.71
AP3S2P59780 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.4□□□□□ -1.71
AP3S2P59780 AC007383.1-201ENST00000445875 636 ntBASIC4.4□□□□□ -1.71
AP3S2P59780 AC099063.2-201ENST00000446360 662 ntBASIC4.4□□□□□ -1.71
AP3S2P59780 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
AP3S2P59780 OTX2P1-201ENST00000450956 354 ntBASIC4.4□□□□□ -1.71
AP3S2P59780 AL355472.1-201ENST00000451795 575 ntTSL 5 BASIC4.4□□□□□ -1.71
AP3S2P59780 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.4□□□□□ -1.71
AP3S2P59780 AP000547.1-201ENST00000454360 617 ntBASIC4.4□□□□□ -1.71
AP3S2P59780 AL035090.1-201ENST00000454835 332 ntBASIC4.4□□□□□ -1.71
AP3S2P59780 RPL5P16-201ENST00000471467 790 ntBASIC4.4□□□□□ -1.71
AP3S2P59780 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
AP3S2P59780 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC4.4□□□□□ -1.71
AP3S2P59780 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
AP3S2P59780 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC4.4□□□□□ -1.71
AP3S2P59780 AP004607.2-201ENST00000533949 322 ntBASIC4.4□□□□□ -1.71
AP3S2P59780 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
AP3S2P59780 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.4□□□□□ -1.71
AP3S2P59780 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC4.4□□□□□ -1.71
AP3S2P59780 MTND2P17-201ENST00000550281 688 ntBASIC4.4□□□□□ -1.71
AP3S2P59780 SMARCE1P3-201ENST00000553649 1231 ntBASIC4.4□□□□□ -1.71
AP3S2P59780 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms