Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.52□□□□□ -1.53
SUMO3P55854 AC021106.1-201ENST00000509020 1058 ntBASIC5.52□□□□□ -1.53
SUMO3P55854 AC092593.2-201ENST00000513866 913 ntBASIC5.52□□□□□ -1.53
SUMO3P55854 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.52□□□□□ -1.53
SUMO3P55854 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC5.52□□□□□ -1.53
SUMO3P55854 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC5.52□□□□□ -1.53
SUMO3P55854 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
SUMO3P55854 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.52□□□□□ -1.53
SUMO3P55854 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC5.52□□□□□ -1.53
SUMO3P55854 AL845552.1-201ENST00000556820 323 ntBASIC5.52□□□□□ -1.53
SUMO3P55854 AC026826.3-201ENST00000561747 158 ntBASIC5.52□□□□□ -1.53
SUMO3P55854 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC5.52□□□□□ -1.53
SUMO3P55854 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SUMO3P55854 GLYATL1P2-202ENST00000588046 902 ntBASIC5.52□□□□□ -1.53
SUMO3P55854 MIR132-201ENST00000591554 101 ntBASIC5.52□□□□□ -1.53
SUMO3P55854 PCNAP1-202ENST00000595299 752 ntBASIC5.52□□□□□ -1.53
SUMO3P55854 VN1R88P-201ENST00000596787 292 ntBASIC5.52□□□□□ -1.53
SUMO3P55854 AC008751.2-201ENST00000597885 980 ntBASIC5.52□□□□□ -1.53
SUMO3P55854 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.52□□□□□ -1.53
SUMO3P55854 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.52□□□□□ -1.53
SUMO3P55854 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.52□□□□□ -1.53
SUMO3P55854 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC5.52□□□□□ -1.53
SUMO3P55854 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SUMO3P55854 AC074140.1-201ENST00000621617 208 ntBASIC5.52□□□□□ -1.53
SUMO3P55854 LGI1-209ENST00000627699 664 ntTSL 3 BASIC5.52□□□□□ -1.53
SUMO3P55854 SAMMSON-209ENST00000641222 1100 ntBASIC5.52□□□□□ -1.53
SUMO3P55854 DMD-228ENST00000541735 7080 ntTSL 5 BASIC5.52□□□□□ -1.53
SUMO3P55854 AL034546.1-201ENST00000623740 3693 ntBASIC5.52□□□□□ -1.53
SUMO3P55854 AC097461.1-201ENST00000568928 2821 ntBASIC5.52□□□□□ -1.53
SUMO3P55854 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
SUMO3P55854 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
SUMO3P55854 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SUMO3P55854 THAP12P9-201ENST00000503971 2360 ntBASIC5.52□□□□□ -1.53
SUMO3P55854 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SUMO3P55854 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
SUMO3P55854 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.52□□□□□ -1.53
SUMO3P55854 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SUMO3P55854 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SUMO3P55854 RBMY1HP-201ENST00000382759 1389 ntBASIC5.52□□□□□ -1.53
SUMO3P55854 HSPA8P17-201ENST00000427029 1382 ntBASIC5.52□□□□□ -1.53
SUMO3P55854 MTND4P10-201ENST00000446199 1363 ntBASIC5.52□□□□□ -1.53
SUMO3P55854 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
SUMO3P55854 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.52□□□□□ -1.53
SUMO3P55854 GNL2P1-201ENST00000451274 2190 ntBASIC5.52□□□□□ -1.53
SUMO3P55854 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SUMO3P55854 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
SUMO3P55854 AC138393.1-206ENST00000540997 1886 ntBASIC5.51□□□□□ -1.53
SUMO3P55854 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SUMO3P55854 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
SUMO3P55854 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SUMO3P55854 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SUMO3P55854 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
SUMO3P55854 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.51□□□□□ -1.53
SUMO3P55854 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
SUMO3P55854 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SUMO3P55854 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SUMO3P55854 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SUMO3P55854 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
SUMO3P55854 Z95114.1-201ENST00000624264 14574 ntBASIC5.51□□□□□ -1.53
SUMO3P55854 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SUMO3P55854 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SUMO3P55854 OR10R3P-201ENST00000361688 942 ntBASIC5.51□□□□□ -1.53
SUMO3P55854 SNORD1C-201ENST00000363315 78 ntBASIC5.51□□□□□ -1.53
SUMO3P55854 RNU1-59P-201ENST00000364829 162 ntBASIC5.51□□□□□ -1.53
SUMO3P55854 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SUMO3P55854 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
SUMO3P55854 RNY3P9-201ENST00000384727 106 ntBASIC5.51□□□□□ -1.53
SUMO3P55854 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SUMO3P55854 RPL23AP17-201ENST00000401064 499 ntBASIC5.51□□□□□ -1.53
SUMO3P55854 RPL7P58-201ENST00000402913 758 ntBASIC5.51□□□□□ -1.53
SUMO3P55854 GCNT1P4-201ENST00000404096 329 ntBASIC5.51□□□□□ -1.53
SUMO3P55854 FCF1P5-201ENST00000406490 482 ntBASIC5.51□□□□□ -1.53
SUMO3P55854 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.51□□□□□ -1.53
SUMO3P55854 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC5.51□□□□□ -1.53
SUMO3P55854 DPPA2P2-201ENST00000418220 897 ntBASIC5.51□□□□□ -1.53
SUMO3P55854 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.51□□□□□ -1.53
SUMO3P55854 ZDHHC20P2-201ENST00000424108 429 ntBASIC5.51□□□□□ -1.53
SUMO3P55854 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC5.51□□□□□ -1.53
SUMO3P55854 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.51□□□□□ -1.53
SUMO3P55854 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.51□□□□□ -1.53
SUMO3P55854 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC5.51□□□□□ -1.53
SUMO3P55854 ZNF619P1-201ENST00000446539 752 ntBASIC5.51□□□□□ -1.53
SUMO3P55854 AL162739.1-201ENST00000450606 307 ntBASIC5.51□□□□□ -1.53
SUMO3P55854 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.51□□□□□ -1.53
SUMO3P55854 RPL7AP52-201ENST00000458096 790 ntBASIC5.51□□□□□ -1.53
SUMO3P55854 AC004263.1-201ENST00000479327 332 ntBASIC5.51□□□□□ -1.53
SUMO3P55854 AC087672.1-201ENST00000479876 766 ntBASIC5.51□□□□□ -1.53
SUMO3P55854 AC124945.1-201ENST00000485133 188 ntBASIC5.51□□□□□ -1.53
SUMO3P55854 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SUMO3P55854 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC5.51□□□□□ -1.53
SUMO3P55854 CCDC11P1-201ENST00000503137 1162 ntBASIC5.51□□□□□ -1.53
SUMO3P55854 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SUMO3P55854 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
SUMO3P55854 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.51□□□□□ -1.53
SUMO3P55854 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC5.51□□□□□ -1.53
SUMO3P55854 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.51□□□□□ -1.53
SUMO3P55854 EIF4A2P5-201ENST00000529914 499 ntBASIC5.51□□□□□ -1.53
SUMO3P55854 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC5.51□□□□□ -1.53
SUMO3P55854 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.51□□□□□ -1.53
SUMO3P55854 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms