Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
TMX2-CTNND1H3BSU7 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.16□□□□□ -1.58
TMX2-CTNND1H3BSU7 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
TMX2-CTNND1H3BSU7 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
TMX2-CTNND1H3BSU7 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.15□□□□□ -1.58
TMX2-CTNND1H3BSU7 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
TMX2-CTNND1H3BSU7 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.15□□□□□ -1.58
TMX2-CTNND1H3BSU7 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
TMX2-CTNND1H3BSU7 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
TMX2-CTNND1H3BSU7 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
TMX2-CTNND1H3BSU7 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.15□□□□□ -1.58
TMX2-CTNND1H3BSU7 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
TMX2-CTNND1H3BSU7 AL035419.1-201ENST00000397037 564 ntBASIC5.15□□□□□ -1.59
TMX2-CTNND1H3BSU7 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
TMX2-CTNND1H3BSU7 RN7SKP216-201ENST00000411050 312 ntBASIC5.15□□□□□ -1.59
TMX2-CTNND1H3BSU7 RN7SKP126-201ENST00000411143 300 ntBASIC5.15□□□□□ -1.59
TMX2-CTNND1H3BSU7 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.15□□□□□ -1.59
TMX2-CTNND1H3BSU7 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.15□□□□□ -1.59
TMX2-CTNND1H3BSU7 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.15□□□□□ -1.59
TMX2-CTNND1H3BSU7 GNG5P5-201ENST00000420444 220 ntBASIC5.15□□□□□ -1.59
TMX2-CTNND1H3BSU7 RPL7P56-201ENST00000429441 717 ntBASIC5.15□□□□□ -1.59
TMX2-CTNND1H3BSU7 FABP7P2-201ENST00000429946 379 ntBASIC5.15□□□□□ -1.59
TMX2-CTNND1H3BSU7 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.15□□□□□ -1.59
TMX2-CTNND1H3BSU7 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.15□□□□□ -1.59
TMX2-CTNND1H3BSU7 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.15□□□□□ -1.59
TMX2-CTNND1H3BSU7 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC5.15□□□□□ -1.59
TMX2-CTNND1H3BSU7 OR52E3P-201ENST00000452083 936 ntBASIC5.15□□□□□ -1.59
TMX2-CTNND1H3BSU7 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.15□□□□□ -1.59
TMX2-CTNND1H3BSU7 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.15□□□□□ -1.59
TMX2-CTNND1H3BSU7 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.15□□□□□ -1.59
TMX2-CTNND1H3BSU7 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.15□□□□□ -1.59
TMX2-CTNND1H3BSU7 YWHABP2-201ENST00000540201 713 ntBASIC5.15□□□□□ -1.59
TMX2-CTNND1H3BSU7 AC122688.1-201ENST00000541494 223 ntBASIC5.15□□□□□ -1.59
TMX2-CTNND1H3BSU7 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.15□□□□□ -1.59
TMX2-CTNND1H3BSU7 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.15□□□□□ -1.59
TMX2-CTNND1H3BSU7 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
TMX2-CTNND1H3BSU7 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.15□□□□□ -1.59
TMX2-CTNND1H3BSU7 AP005403.1-201ENST00000579720 229 ntBASIC5.15□□□□□ -1.59
TMX2-CTNND1H3BSU7 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5.15□□□□□ -1.59
TMX2-CTNND1H3BSU7 AC005252.1-201ENST00000604518 1063 ntBASIC5.15□□□□□ -1.59
TMX2-CTNND1H3BSU7 MIR6748-201ENST00000610433 71 ntBASIC5.15□□□□□ -1.59
TMX2-CTNND1H3BSU7 BNIP3P41-202ENST00000616656 861 ntBASIC5.15□□□□□ -1.59
TMX2-CTNND1H3BSU7 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.15□□□□□ -1.59
TMX2-CTNND1H3BSU7 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
TMX2-CTNND1H3BSU7 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.15□□□□□ -1.59
TMX2-CTNND1H3BSU7 AL353796.1-201ENST00000561542 3241 ntBASIC5.15□□□□□ -1.59
TMX2-CTNND1H3BSU7 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.15□□□□□ -1.59
TMX2-CTNND1H3BSU7 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.15□□□□□ -1.59
TMX2-CTNND1H3BSU7 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
TMX2-CTNND1H3BSU7 HSPD1P7-201ENST00000447985 1686 ntBASIC5.15□□□□□ -1.59
TMX2-CTNND1H3BSU7 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TMX2-CTNND1H3BSU7 THAP12P4-201ENST00000528321 2266 ntBASIC5.14□□□□□ -1.59
TMX2-CTNND1H3BSU7 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TMX2-CTNND1H3BSU7 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.14□□□□□ -1.59
TMX2-CTNND1H3BSU7 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.14□□□□□ -1.59
TMX2-CTNND1H3BSU7 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TMX2-CTNND1H3BSU7 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
TMX2-CTNND1H3BSU7 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TMX2-CTNND1H3BSU7 RNU4-4P-201ENST00000364588 130 ntBASIC5.14□□□□□ -1.59
TMX2-CTNND1H3BSU7 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TMX2-CTNND1H3BSU7 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
TMX2-CTNND1H3BSU7 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.14□□□□□ -1.59
TMX2-CTNND1H3BSU7 RPL6P21-201ENST00000418672 846 ntBASIC5.14□□□□□ -1.59
TMX2-CTNND1H3BSU7 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.14□□□□□ -1.59
TMX2-CTNND1H3BSU7 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.14□□□□□ -1.59
TMX2-CTNND1H3BSU7 H2AFZP6-201ENST00000444403 394 ntBASIC5.14□□□□□ -1.59
TMX2-CTNND1H3BSU7 AC012512.1-201ENST00000446594 718 ntBASIC5.14□□□□□ -1.59
TMX2-CTNND1H3BSU7 AL157385.1-201ENST00000446973 268 ntBASIC5.14□□□□□ -1.59
TMX2-CTNND1H3BSU7 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.14□□□□□ -1.59
TMX2-CTNND1H3BSU7 DNAJB5P1-201ENST00000454004 806 ntBASIC5.14□□□□□ -1.59
TMX2-CTNND1H3BSU7 RPL35AP28-201ENST00000459730 331 ntBASIC5.14□□□□□ -1.59
TMX2-CTNND1H3BSU7 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.14□□□□□ -1.59
TMX2-CTNND1H3BSU7 AC092754.1-201ENST00000472975 479 ntBASIC5.14□□□□□ -1.59
TMX2-CTNND1H3BSU7 RPS26P24-201ENST00000497656 331 ntBASIC5.14□□□□□ -1.59
TMX2-CTNND1H3BSU7 AC109464.1-201ENST00000511091 819 ntBASIC5.14□□□□□ -1.59
TMX2-CTNND1H3BSU7 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.14□□□□□ -1.59
TMX2-CTNND1H3BSU7 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.14□□□□□ -1.59
TMX2-CTNND1H3BSU7 AC079064.1-201ENST00000528365 362 ntBASIC5.14□□□□□ -1.59
TMX2-CTNND1H3BSU7 OR1F2P-201ENST00000570470 933 ntBASIC5.14□□□□□ -1.59
TMX2-CTNND1H3BSU7 MIR3934-201ENST00000579806 107 ntBASIC5.14□□□□□ -1.59
TMX2-CTNND1H3BSU7 AC011840.5-201ENST00000582125 771 ntBASIC5.14□□□□□ -1.59
TMX2-CTNND1H3BSU7 AC011487.3-201ENST00000593607 453 ntBASIC5.14□□□□□ -1.59
TMX2-CTNND1H3BSU7 AC100827.5-201ENST00000615883 426 ntBASIC5.14□□□□□ -1.59
TMX2-CTNND1H3BSU7 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.14□□□□□ -1.59
TMX2-CTNND1H3BSU7 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
TMX2-CTNND1H3BSU7 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
TMX2-CTNND1H3BSU7 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TMX2-CTNND1H3BSU7 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.14□□□□□ -1.59
TMX2-CTNND1H3BSU7 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TMX2-CTNND1H3BSU7 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.13□□□□□ -1.59
TMX2-CTNND1H3BSU7 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TMX2-CTNND1H3BSU7 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.13□□□□□ -1.59
TMX2-CTNND1H3BSU7 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
TMX2-CTNND1H3BSU7 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TMX2-CTNND1H3BSU7 AC004817.4-201ENST00000602396 3625 ntBASIC5.13□□□□□ -1.59
TMX2-CTNND1H3BSU7 MAPK10-349ENST00000641767 3661 ntBASIC5.13□□□□□ -1.59
TMX2-CTNND1H3BSU7 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.13□□□□□ -1.59
TMX2-CTNND1H3BSU7 AL109941.1-201ENST00000401925 229 ntBASIC5.13□□□□□ -1.59
TMX2-CTNND1H3BSU7 NPM1P40-201ENST00000412758 733 ntBASIC5.13□□□□□ -1.59
TMX2-CTNND1H3BSU7 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms