Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 AC060814.3-201ENST00000557717 460 ntBASIC9.46□□□□□ -0.9
RTN4Q9NQC3 AC055876.1-202ENST00000567053 138 ntBASIC9.46□□□□□ -0.9
RTN4Q9NQC3 MIR4716-201ENST00000579628 84 ntBASIC9.46□□□□□ -0.9
RTN4Q9NQC3 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC9.46□□□□□ -0.9
RTN4Q9NQC3 AL355812.1-201ENST00000603215 216 ntBASIC9.46□□□□□ -0.9
RTN4Q9NQC3 AC019322.2-201ENST00000605634 147 ntBASIC9.46□□□□□ -0.9
RTN4Q9NQC3 AC009237.16-201ENST00000612987 506 ntBASIC9.46□□□□□ -0.9
RTN4Q9NQC3 AC138649.5-201ENST00000637456 137 ntBASIC9.46□□□□□ -0.9
RTN4Q9NQC3 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
RTN4Q9NQC3 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC9.46□□□□□ -0.9
RTN4Q9NQC3 AC114786.2-201ENST00000510090 1426 ntBASIC9.46□□□□□ -0.9
RTN4Q9NQC3 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC9.46□□□□□ -0.9
RTN4Q9NQC3 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
RTN4Q9NQC3 LARP7-201ENST00000324052 2164 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
RTN4Q9NQC3 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
RTN4Q9NQC3 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
RTN4Q9NQC3 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC9.45□□□□□ -0.9
RTN4Q9NQC3 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.9
RTN4Q9NQC3 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
RTN4Q9NQC3 KIAA1143-201ENST00000296121 5122 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
RTN4Q9NQC3 ZNF271P-201ENST00000399070 5124 ntTSL 2 BASIC9.45□□□□□ -0.9
RTN4Q9NQC3 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
RTN4Q9NQC3 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
RTN4Q9NQC3 TPPP2-201ENST00000321760 752 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
RTN4Q9NQC3 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
RTN4Q9NQC3 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
RTN4Q9NQC3 RNU4-1-201ENST00000363925 141 ntBASIC9.45□□□□□ -0.9
RTN4Q9NQC3 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC9.45□□□□□ -0.9
RTN4Q9NQC3 RABL2A-201ENST00000376439 623 ntTSL 5 BASIC9.45□□□□□ -0.9
RTN4Q9NQC3 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
RTN4Q9NQC3 MAP3K7CL-205ENST00000399926 749 ntAPPRIS P1 TSL 3 BASIC9.45□□□□□ -0.9
RTN4Q9NQC3 AL096800.1-201ENST00000405326 893 ntBASIC9.45□□□□□ -0.9
RTN4Q9NQC3 MAGEA13P-201ENST00000418272 951 ntBASIC9.45□□□□□ -0.9
RTN4Q9NQC3 AC113412.1-201ENST00000425840 504 ntBASIC9.45□□□□□ -0.9
RTN4Q9NQC3 GTF2IP20-201ENST00000431663 360 ntBASIC9.45□□□□□ -0.9
RTN4Q9NQC3 AL356276.2-201ENST00000435919 558 ntBASIC9.45□□□□□ -0.9
RTN4Q9NQC3 EIF4A1P11-201ENST00000451239 222 ntBASIC9.45□□□□□ -0.9
RTN4Q9NQC3 SNX18P4-201ENST00000456554 838 ntBASIC9.45□□□□□ -0.9
RTN4Q9NQC3 RN7SL666P-201ENST00000460953 304 ntBASIC9.45□□□□□ -0.9
RTN4Q9NQC3 AC027541.1-201ENST00000519306 485 ntTSL 3 BASIC9.45□□□□□ -0.9
RTN4Q9NQC3 AC022790.1-201ENST00000522872 204 ntBASIC9.45□□□□□ -0.9
RTN4Q9NQC3 AC022616.3-201ENST00000523940 148 ntBASIC9.45□□□□□ -0.9
RTN4Q9NQC3 AC011979.2-201ENST00000527568 352 ntBASIC9.45□□□□□ -0.9
RTN4Q9NQC3 AC006512.2-201ENST00000543250 486 ntBASIC9.45□□□□□ -0.9
RTN4Q9NQC3 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC9.45□□□□□ -0.9
RTN4Q9NQC3 AC023511.1-201ENST00000549055 571 ntTSL 3 BASIC9.45□□□□□ -0.9
RTN4Q9NQC3 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC9.45□□□□□ -0.9
RTN4Q9NQC3 SMARCE1P3-201ENST00000553649 1231 ntBASIC9.45□□□□□ -0.9
RTN4Q9NQC3 OR4T1P-201ENST00000554933 911 ntBASIC9.45□□□□□ -0.9
RTN4Q9NQC3 AC104261.1-202ENST00000557946 509 ntTSL 3 BASIC9.45□□□□□ -0.9
RTN4Q9NQC3 AC079075.1-201ENST00000559543 878 ntBASIC9.45□□□□□ -0.9
RTN4Q9NQC3 AC104261.1-201ENST00000560203 392 ntTSL 3 BASIC9.45□□□□□ -0.9
RTN4Q9NQC3 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC9.45□□□□□ -0.9
RTN4Q9NQC3 AC027688.1-201ENST00000568471 584 ntTSL 4 BASIC9.45□□□□□ -0.9
RTN4Q9NQC3 AC060771.1-201ENST00000582031 164 ntBASIC9.45□□□□□ -0.9
RTN4Q9NQC3 AC008991.1-201ENST00000591285 537 ntTSL 4 BASIC9.45□□□□□ -0.9
RTN4Q9NQC3 PCDH18-206ENST00000611581 819 ntTSL 4 BASIC9.45□□□□□ -0.9
RTN4Q9NQC3 AP001005.3-201ENST00000622049 129 ntBASIC9.45□□□□□ -0.9
RTN4Q9NQC3 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC9.45□□□□□ -0.9
RTN4Q9NQC3 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC9.45□□□□□ -0.9
RTN4Q9NQC3 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
RTN4Q9NQC3 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC9.45□□□□□ -0.9
RTN4Q9NQC3 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
RTN4Q9NQC3 RGS6-205ENST00000406236 1476 ntAPPRIS ALT1 TSL 1 (best) BASIC9.45□□□□□ -0.9
RTN4Q9NQC3 MAPK10-319ENST00000641459 2542 ntBASIC9.45□□□□□ -0.9
RTN4Q9NQC3 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC9.45□□□□□ -0.9
RTN4Q9NQC3 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
RTN4Q9NQC3 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
RTN4Q9NQC3 WDR7-202ENST00000357574 7213 ntTSL 5 BASIC9.45□□□□□ -0.9
RTN4Q9NQC3 CUBNP3-201ENST00000457461 1784 ntBASIC9.45□□□□□ -0.9
RTN4Q9NQC3 ELK3-201ENST00000228741 4205 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
RTN4Q9NQC3 UBE2V1-202ENST00000371657 1973 ntTSL 4 BASIC9.44□□□□□ -0.9
RTN4Q9NQC3 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
RTN4Q9NQC3 AL353052.2-201ENST00000441459 2241 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
RTN4Q9NQC3 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
RTN4Q9NQC3 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC9.44□□□□□ -0.9
RTN4Q9NQC3 MLH1-216ENST00000458205 2608 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
RTN4Q9NQC3 Y_RNA.813-201ENST00000364639 102 ntBASIC9.44□□□□□ -0.9
RTN4Q9NQC3 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
RTN4Q9NQC3 RNU2-15P-201ENST00000410692 191 ntBASIC9.44□□□□□ -0.9
RTN4Q9NQC3 RN7SKP263-201ENST00000411194 309 ntBASIC9.44□□□□□ -0.9
RTN4Q9NQC3 ZFY-AS1-201ENST00000417305 500 ntTSL 2 BASIC9.44□□□□□ -0.9
RTN4Q9NQC3 AL358942.1-201ENST00000418595 1178 ntBASIC9.44□□□□□ -0.9
RTN4Q9NQC3 AL592293.2-201ENST00000422292 996 ntBASIC9.44□□□□□ -0.9
RTN4Q9NQC3 TRMT112P4-201ENST00000429016 379 ntBASIC9.44□□□□□ -0.9
RTN4Q9NQC3 RBMY2QP-201ENST00000429799 1147 ntBASIC9.44□□□□□ -0.9
RTN4Q9NQC3 RN7SL35P-201ENST00000466169 292 ntBASIC9.44□□□□□ -0.9
RTN4Q9NQC3 AC055855.1-201ENST00000489563 579 ntBASIC9.44□□□□□ -0.9
RTN4Q9NQC3 AP000867.1-201ENST00000511464 255 ntBASIC9.44□□□□□ -0.9
RTN4Q9NQC3 ADI1P2-201ENST00000514945 429 ntBASIC9.44□□□□□ -0.9
RTN4Q9NQC3 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC9.44□□□□□ -0.9
RTN4Q9NQC3 TMEM126A-206ENST00000532180 643 ntTSL 3 BASIC9.44□□□□□ -0.9
RTN4Q9NQC3 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC9.44□□□□□ -0.9
RTN4Q9NQC3 AC126177.6-201ENST00000550420 1009 ntBASIC9.44□□□□□ -0.9
RTN4Q9NQC3 AC126323.1-201ENST00000561706 611 ntTSL 3 BASIC9.44□□□□□ -0.9
RTN4Q9NQC3 SHBG-209ENST00000572182 479 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
RTN4Q9NQC3 SSH2-209ENST00000579954 428 ntTSL 3 BASIC9.44□□□□□ -0.9
RTN4Q9NQC3 AC011712.1-201ENST00000588959 234 ntBASIC9.44□□□□□ -0.9
RTN4Q9NQC3 ARMCX7P-202ENST00000602449 655 ntBASIC9.44□□□□□ -0.9
RTN4Q9NQC3 AL158211.4-201ENST00000606988 584 ntBASIC9.44□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms