Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 PCYT1A-201ENST00000292823 5597 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 ZNF608-210ENST00000613878 3190 ntTSL 5 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 EPHB2-204ENST00000400191 10816 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 ELP2-204ENST00000423854 2385 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 AC004584.3-201ENST00000572877 2356 ntBASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 LEP-201ENST00000308868 3420 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 PARD3B-203ENST00000358768 3432 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 DTL-206ENST00000542077 4471 ntTSL 2 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 CD300LF-203ENST00000343125 1554 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 RPA4-201ENST00000373040 1560 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 LARGE-AS1-203ENST00000438159 2618 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 ZEB2-217ENST00000470879 2648 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 ZNF691-208ENST00000630961 1581 ntTSL 3 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 KRT42P-202ENST00000438131 2895 ntTSL 2 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 HCG18-244ENST00000602516 2890 ntBASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 OGDH-201ENST00000222673 4181 ntAPPRIS P3 TSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 ANTXRLP1-201ENST00000604933 1829 ntBASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 PRAMEF11-201ENST00000619922 1845 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 CKAP2-201ENST00000258607 3375 ntAPPRIS P3 TSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 DDX5-202ENST00000450599 2077 ntTSL 2 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 MYOM1-203ENST00000400569 4927 ntTSL 5 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 MIR194-2HG-201ENST00000413053 3647 ntTSL 2 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 AC018512.1-201ENST00000417761 2326 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 MAPK10-375ENST00000641989 2331 ntBASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 MOCOS-201ENST00000261326 6160 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 EXOSC10-202ENST00000376936 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 GSTM2-201ENST00000241337 1157 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 MIRLET7E-201ENST00000362102 79 ntBASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 RNU6-170P-201ENST00000362832 104 ntBASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 RNU6-508P-201ENST00000363231 103 ntBASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 U3.11-201ENST00000364476 212 ntBASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 RN7SKP239-201ENST00000364814 295 ntBASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 RNU6-61P-201ENST00000365528 109 ntBASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 S100A2-201ENST00000368707 556 ntTSL 2 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 TINAG-203ENST00000370869 782 ntTSL 3 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 DEFA1B-201ENST00000382689 491 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 RNU6-1336P-201ENST00000383886 109 ntBASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 MIR525-201ENST00000384978 85 ntBASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 MIR506-201ENST00000384998 124 ntBASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 TRAV18-201ENST00000390446 440 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 SNORA12.2-201ENST00000391040 156 ntBASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 RNU6-663P-201ENST00000391105 106 ntBASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 AC096664.1-201ENST00000393996 778 ntBASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 AL033527.2-201ENST00000418255 785 ntTSL 2 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 AC064862.1-201ENST00000421221 201 ntBASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 HM13-IT1-201ENST00000421894 356 ntTSL 3 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 AC121158.1-201ENST00000425645 239 ntTSL 3 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 TBC1D3P7-201ENST00000428328 914 ntBASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 AP001324.1-201ENST00000428553 399 ntBASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 AL109613.1-201ENST00000431770 722 ntTSL 2 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 AL590094.1-203ENST00000435649 828 ntTSL 5 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 LINC00475-207ENST00000438322 424 ntTSL 3 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 RPL39P40-201ENST00000445481 146 ntBASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 AL031597.1-201ENST00000447383 432 ntBASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 C11orf94-201ENST00000449465 369 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 AC013399.1-201ENST00000450311 418 ntBASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 AC096536.2-201ENST00000450503 343 ntTSL 2 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 EIF4A1P11-201ENST00000451239 222 ntBASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 AL021397.1-201ENST00000451806 248 ntBASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 PRDX2P2-201ENST00000451920 587 ntBASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 AL031847.1-201ENST00000455744 378 ntTSL 3 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 AC009963.3-201ENST00000458090 486 ntBASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 SCARNA18B-201ENST00000458806 135 ntBASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 ZEB2-214ENST00000462355 656 ntTSL 4 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 AC009269.1-201ENST00000470368 833 ntTSL 3 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 AL161757.1-201ENST00000471982 321 ntBASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 LAMTOR4-207ENST00000474141 519 ntTSL 2 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 AC084017.1-201ENST00000483240 860 ntBASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 AC021074.1-201ENST00000489462 633 ntBASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 RN7SL166P-201ENST00000489872 280 ntBASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 RPS2P45-202ENST00000490535 847 ntBASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 RN7SL127P-201ENST00000494856 300 ntBASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 MEF2BNBP1-201ENST00000502742 330 ntBASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 SUMO2P6-201ENST00000505273 288 ntBASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 AC005823.1-201ENST00000510059 585 ntTSL 4 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 MIR3945HG-201ENST00000510284 576 ntTSL 4 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 RNU6-561P-201ENST00000516222 102 ntBASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 SCARNA20-201ENST00000516768 131 ntBASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 RNU6-448P-201ENST00000517052 107 ntBASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 RNU1-104P-201ENST00000517280 175 ntBASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 CALCP-201ENST00000522108 212 ntBASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 AP003550.1-201ENST00000522416 414 ntTSL 3 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 AC104576.1-201ENST00000524225 88 ntBASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 RBMS2P1-201ENST00000525031 1226 ntBASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 HNRNPA1P60-201ENST00000526810 951 ntBASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 TMX2-CTNND1-201ENST00000528395 585 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 AC109635.1-201ENST00000529200 490 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 181.9 ms