RNA–Protein interactions for RNA: ENST00000445481.1

RPL39P40-201, Transcript of ribosomal protein L39 pseudogene 40, humanhuman

BASIC

Gene RPL39P40, Length 146 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P40-201ENST00000445481 AEBP2Q6ZN18 517 aaPredicted RBP13.18□□□□□ -0.3
RPL39P40-201ENST00000445481 CHIC1Q5VXU3 224 aa12.29□□□□□ -0.44
RPL39P40-201ENST00000445481 SENP3Q9H4L4 574 aaPredicted RBP11.13□□□□□ -0.63
RPL39P40-201ENST00000445481 PHF23Q9BUL5 403 aaPredicted RBP11.03□□□□□ -0.64
RPL39P40-201ENST00000445481 FOXD1Q16676 465 aa10.48□□□□□ -0.73
RPL39P40-201ENST00000445481 POTEDQ86YR6 584 aa9.87□□□□□ -0.83
RPL39P40-201ENST00000445481 MSH5O43196 834 aa9.76□□□□□ -0.85
RPL39P40-201ENST00000445481 PPP6R1Q9UPN7 881 aa9.74□□□□□ -0.85
RPL39P40-201ENST00000445481 PIAS4Q8N2W9 510 aaPredicted RBP9.73□□□□□ -0.85
RPL39P40-201ENST00000445481 PLPPR3Q6T4P5 718 aa9.71□□□□□ -0.86
RPL39P40-201ENST00000445481 ADRA2BP18089 450 aa9.68□□□□□ -0.86
RPL39P40-201ENST00000445481 MAPK8IP2Q13387 824 aaPredicted RBP8.97□□□□□ -0.97
RPL39P40-201ENST00000445481 DMRT2Q9Y5R5 561 aa8.83□□□□□ -1
RPL39P40-201ENST00000445481 SCAF1Q9H7N4 1312 aaKnown RBP8.69□□□□□ -1.02
RPL39P40-201ENST00000445481 PPP4R3CPQ6ZMV5 832 aa8.53□□□□□ -1.04
RPL39P40-201ENST00000445481 DCAF8L1A6NGE4 600 aa8.51□□□□□ -1.05
RPL39P40-201ENST00000445481 CACNB1Q02641 598 aaPredicted RBP8.51□□□□□ -1.05
RPL39P40-201ENST00000445481 HOXD11P31277 338 aaPredicted RBP8.44□□□□□ -1.06
RPL39P40-201ENST00000445481 RNF39Q9H2S5 420 aa8.37□□□□□ -1.07
RPL39P40-201ENST00000445481 CNKSR2Q8WXI2 1034 aa8.36□□□□□ -1.07
RPL39P40-201ENST00000445481 RNF216Q9NWF9 866 aaPredicted RBP8.32□□□□□ -1.08
RPL39P40-201ENST00000445481 C1QBPQ07021 282 aaKnown RBP8.19□□□□□ -1.1
RPL39P40-201ENST00000445481 DNAJC5BQ9UF47 199 aa8.09□□□□□ -1.11
RPL39P40-201ENST00000445481 NPM3O75607 178 aaKnown RBP8.07□□□□□ -1.12
RPL39P40-201ENST00000445481 NCBP3Q53F19 620 aaKnown RBP8.07□□□□□ -1.12
RPL39P40-201ENST00000445481 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.05□□□□□ -1.12
RPL39P40-201ENST00000445481 U3KPZ7 1027 aaPredicted RBP7.9□□□□□ -1.14
RPL39P40-201ENST00000445481 SPINK5Q9NQ38 1064 aaPredicted RBP7.87□□□□□ -1.15
RPL39P40-201ENST00000445481 KCNA4P22459 653 aa7.81□□□□□ -1.16
RPL39P40-201ENST00000445481 DSG3P32926 999 aa7.81□□□□□ -1.16
RPL39P40-201ENST00000445481 CAPN15O75808 1086 aa7.8□□□□□ -1.16
RPL39P40-201ENST00000445481 SLC4A2P04920 1241 aa7.77□□□□□ -1.17
RPL39P40-201ENST00000445481 POTEHQ6S545 545 aa7.69□□□□□ -1.18
RPL39P40-201ENST00000445481 ABCB7O75027 752 aa7.67□□□□□ -1.18
RPL39P40-201ENST00000445481 TRHP20396 242 aaPredicted RBP7.66□□□□□ -1.18
RPL39P40-201ENST00000445481 ZNF219Q9P2Y4 722 aaPredicted RBP7.56□□□□□ -1.2
RPL39P40-201ENST00000445481 APLP2Q06481 763 aa7.5□□□□□ -1.21
RPL39P40-201ENST00000445481 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.49□□□□□ -1.21
RPL39P40-201ENST00000445481 HNRNPUL2Q1KMD3 747 aaKnown RBP7.49□□□□□ -1.21
RPL39P40-201ENST00000445481 SAMD1Q6SPF0 538 aaPredicted RBP7.48□□□□□ -1.21
RPL39P40-201ENST00000445481 POLA2Q14181 598 aa7.42□□□□□ -1.22
RPL39P40-201ENST00000445481 MYCNP04198 464 aaPredicted RBP7.4□□□□□ -1.22
RPL39P40-201ENST00000445481 ATF5Q9Y2D1 282 aaPredicted RBP7.37□□□□□ -1.23
RPL39P40-201ENST00000445481 RBM42Q9BTD8 480 aaKnown RBP7.35□□□□□ -1.23
RPL39P40-201ENST00000445481 CHRDL2Q6WN34 429 aa7.33□□□□□ -1.24
RPL39P40-201ENST00000445481 SLC4A1APQ9BWU0 796 aaKnown RBP7.29□□□□□ -1.24
RPL39P40-201ENST00000445481 FOXD4L1Q9NU39 408 aa7.27□□□□□ -1.25
RPL39P40-201ENST00000445481 ZBTB22O15209 634 aa7.23□□□□□ -1.25
RPL39P40-201ENST00000445481 OSCARQ8IYS5 282 aa7.21□□□□□ -1.26
RPL39P40-201ENST00000445481 AKT1S1Q96B36 256 aa7.19□□□□□ -1.26
RPL39P40-201ENST00000445481 REM2Q8IYK8 340 aaPredicted RBP7.17□□□□□ -1.26
RPL39P40-201ENST00000445481 PIP4P2Q8N4L2 257 aa7.15□□□□□ -1.26
RPL39P40-201ENST00000445481 ZBTB12Q9Y330 459 aaPredicted RBP7.14□□□□□ -1.27
RPL39P40-201ENST00000445481 PITPNM1O00562 1244 aa7.12□□□□□ -1.27
RPL39P40-201ENST00000445481 SP7Q8TDD2 431 aaPredicted RBP7.12□□□□□ -1.27
RPL39P40-201ENST00000445481 FXR2P51116 673 aaKnown RBP eCLIP7.05□□□□□ -1.28
RPL39P40-201ENST00000445481 HAX1O00165 279 aa7.03□□□□□ -1.28
RPL39P40-201ENST00000445481 EVX2Q03828 476 aa7.03□□□□□ -1.28
RPL39P40-201ENST00000445481 MKRN4PQ13434 485 aaPredicted RBP7□□□□□ -1.29
RPL39P40-201ENST00000445481 ATXN8OSP0DMR3 200 aa6.99□□□□□ -1.29
RPL39P40-201ENST00000445481 SPDYE2BA6NHP3 402 aa6.96□□□□□ -1.3
RPL39P40-201ENST00000445481 SPDYE6P0CI01 402 aa6.96□□□□□ -1.3
RPL39P40-201ENST00000445481 SPDYE2Q495Y8 402 aa6.96□□□□□ -1.3
RPL39P40-201ENST00000445481 FBLN2P98095 1184 aa6.94□□□□□ -1.3
RPL39P40-201ENST00000445481 CLEC11AQ9Y240 323 aa6.93□□□□□ -1.3
RPL39P40-201ENST00000445481 PRKAR2AP13861 404 aaKnown RBP6.91□□□□□ -1.3
RPL39P40-201ENST00000445481 SSUH2Q9Y2M2 353 aa6.89□□□□□ -1.31
RPL39P40-201ENST00000445481 ZNF692Q9BU19 519 aaPredicted RBP6.88□□□□□ -1.31
RPL39P40-201ENST00000445481 SPDYE1Q8NFV5 336 aaPredicted RBP6.87□□□□□ -1.31
RPL39P40-201ENST00000445481 CHADLQ6NUI6 762 aa6.86□□□□□ -1.31
RPL39P40-201ENST00000445481 C19orf67A6NJJ6 358 aa6.84□□□□□ -1.31
RPL39P40-201ENST00000445481 PABPN1Q86U42 306 aaKnown RBP eCLIP6.8□□□□□ -1.32
RPL39P40-201ENST00000445481 GABBR2O75899 941 aa6.79□□□□□ -1.32
RPL39P40-201ENST00000445481 PRR29P0C7W0 189 aa6.76□□□□□ -1.33
RPL39P40-201ENST00000445481 CSRNP3Q8WYN3 585 aa6.72□□□□□ -1.33
RPL39P40-201ENST00000445481 POTEIP0CG38 1075 aa6.69□□□□□ -1.34
RPL39P40-201ENST00000445481 LHX8Q68G74 356 aa6.69□□□□□ -1.34
RPL39P40-201ENST00000445481 CD44P16070 742 aaKnown RBP6.68□□□□□ -1.34
RPL39P40-201ENST00000445481 FARP1Q9Y4F1 1045 aaPredicted RBP6.68□□□□□ -1.34
RPL39P40-201ENST00000445481 CREBZFQ9NS37 354 aa6.61□□□□□ -1.35
RPL39P40-201ENST00000445481 EHMT2Q96KQ7 1210 aa6.57□□□□□ -1.36
RPL39P40-201ENST00000445481 ZRANB1Q9UGI0 708 aa6.57□□□□□ -1.36
RPL39P40-201ENST00000445481 GALR2O43603 387 aaPredicted RBP6.55□□□□□ -1.36
RPL39P40-201ENST00000445481 ZNF579Q8NAF0 562 aaKnown RBP6.55□□□□□ -1.36
RPL39P40-201ENST00000445481 SPDYE4A6NLX3 237 aa6.53□□□□□ -1.36
RPL39P40-201ENST00000445481 DCBLD2Q96PD2 775 aa6.53□□□□□ -1.36
RPL39P40-201ENST00000445481 PHF12Q96QT6 1004 aa6.51□□□□□ -1.37
RPL39P40-201ENST00000445481 POTEB2H3BUK9 544 aa6.49□□□□□ -1.37
RPL39P40-201ENST00000445481 MNX1P50219 401 aaPredicted RBP6.48□□□□□ -1.37
RPL39P40-201ENST00000445481 STAG3Q9UJ98 1225 aa6.48□□□□□ -1.37
RPL39P40-201ENST00000445481 CLCN6P51797 869 aa6.47□□□□□ -1.37
RPL39P40-201ENST00000445481 PELP1Q8IZL8 1130 aaKnown RBP6.46□□□□□ -1.38
RPL39P40-201ENST00000445481 OTUD5Q96G74 571 aa6.45□□□□□ -1.38
RPL39P40-201ENST00000445481 MS4A3Q96HJ5 214 aa6.4□□□□□ -1.38
RPL39P40-201ENST00000445481 PLSCR2Q9NRY7 297 aa6.4□□□□□ -1.38
RPL39P40-201ENST00000445481 PAK3O75914 559 aaPredicted RBP6.39□□□□□ -1.39
RPL39P40-201ENST00000445481 NPM1P06748 294 aaKnown RBP eCLIP6.38□□□□□ -1.39
RPL39P40-201ENST00000445481 POTEJP0CG39 1038 aa6.37□□□□□ -1.39
RPL39P40-201ENST00000445481 TSPYL2Q9H2G4 693 aaPredicted RBP6.36□□□□□ -1.39
RPL39P40-201ENST00000445481 ATMINO43313 823 aaPredicted RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms