Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC5.04□□□□□ -1.6
CCDC71Q8IV32 SNORA48.9-201ENST00000516419 162 ntBASIC5.04□□□□□ -1.6
CCDC71Q8IV32 SCARNA20.4-201ENST00000516969 131 ntBASIC5.04□□□□□ -1.6
CCDC71Q8IV32 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.04□□□□□ -1.6
CCDC71Q8IV32 AP006245.2-201ENST00000522004 300 ntBASIC5.04□□□□□ -1.6
CCDC71Q8IV32 OR11H3P-201ENST00000554547 982 ntBASIC5.04□□□□□ -1.6
CCDC71Q8IV32 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CCDC71Q8IV32 AC100814.1-201ENST00000606963 623 ntBASIC5.04□□□□□ -1.6
CCDC71Q8IV32 AL512329.2-201ENST00000607350 548 ntBASIC5.04□□□□□ -1.6
CCDC71Q8IV32 AC090607.5-201ENST00000615692 224 ntBASIC5.04□□□□□ -1.6
CCDC71Q8IV32 AC107308.1-201ENST00000615897 301 ntBASIC5.04□□□□□ -1.6
CCDC71Q8IV32 AC118658.2-201ENST00000618697 459 ntBASIC5.04□□□□□ -1.6
CCDC71Q8IV32 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC5.04□□□□□ -1.6
CCDC71Q8IV32 AC132068.1-201ENST00000623805 459 ntBASIC5.04□□□□□ -1.6
CCDC71Q8IV32 AC135068.5-201ENST00000624197 983 ntBASIC5.04□□□□□ -1.6
CCDC71Q8IV32 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.04□□□□□ -1.6
CCDC71Q8IV32 SAMMSON-227ENST00000642114 1199 ntBASIC5.04□□□□□ -1.6
CCDC71Q8IV32 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC71Q8IV32 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC71Q8IV32 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC71Q8IV32 AC073429.2-201ENST00000569694 1444 ntBASIC5.04□□□□□ -1.6
CCDC71Q8IV32 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC71Q8IV32 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
CCDC71Q8IV32 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC71Q8IV32 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC71Q8IV32 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC71Q8IV32 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC71Q8IV32 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.03□□□□□ -1.6
CCDC71Q8IV32 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
CCDC71Q8IV32 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC71Q8IV32 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.03□□□□□ -1.6
CCDC71Q8IV32 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
CCDC71Q8IV32 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC71Q8IV32 CDY11P-201ENST00000447168 1651 ntBASIC5.03□□□□□ -1.6
CCDC71Q8IV32 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC71Q8IV32 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.03□□□□□ -1.6
CCDC71Q8IV32 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC71Q8IV32 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.03□□□□□ -1.6
CCDC71Q8IV32 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CCDC71Q8IV32 RN7SKP28-201ENST00000364770 305 ntBASIC5.03□□□□□ -1.6
CCDC71Q8IV32 AC007618.1-201ENST00000366455 732 ntBASIC5.03□□□□□ -1.6
CCDC71Q8IV32 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC71Q8IV32 RNU1-77P-201ENST00000390868 162 ntBASIC5.03□□□□□ -1.6
CCDC71Q8IV32 GAPDHP42-201ENST00000406848 981 ntBASIC5.03□□□□□ -1.6
CCDC71Q8IV32 AC211486.3-201ENST00000412694 621 ntBASIC5.03□□□□□ -1.6
CCDC71Q8IV32 AC007161.1-204ENST00000423039 460 ntBASIC5.03□□□□□ -1.6
CCDC71Q8IV32 CYCSP12-201ENST00000437729 300 ntBASIC5.03□□□□□ -1.6
CCDC71Q8IV32 AC019185.1-201ENST00000442718 389 ntBASIC5.03□□□□□ -1.6
CCDC71Q8IV32 AC016772.1-201ENST00000444170 1261 ntBASIC5.03□□□□□ -1.6
CCDC71Q8IV32 AL450023.1-201ENST00000450868 751 ntBASIC5.03□□□□□ -1.6
CCDC71Q8IV32 RN7SL583P-201ENST00000475692 287 ntBASIC5.03□□□□□ -1.6
CCDC71Q8IV32 RPL7P39-201ENST00000481157 744 ntBASIC5.03□□□□□ -1.6
CCDC71Q8IV32 RN7SL727P-201ENST00000482164 296 ntBASIC5.03□□□□□ -1.6
CCDC71Q8IV32 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.03□□□□□ -1.6
CCDC71Q8IV32 NDUFA5P12-201ENST00000503796 343 ntBASIC5.03□□□□□ -1.6
CCDC71Q8IV32 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.03□□□□□ -1.6
CCDC71Q8IV32 AC024558.1-201ENST00000505008 528 ntBASIC5.03□□□□□ -1.6
CCDC71Q8IV32 AC093763.2-201ENST00000505334 1223 ntBASIC5.03□□□□□ -1.6
CCDC71Q8IV32 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.03□□□□□ -1.6
CCDC71Q8IV32 EIF3KP3-201ENST00000514461 639 ntBASIC5.03□□□□□ -1.6
CCDC71Q8IV32 HMGN1P9-201ENST00000515212 298 ntBASIC5.03□□□□□ -1.6
CCDC71Q8IV32 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.03□□□□□ -1.6
CCDC71Q8IV32 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.03□□□□□ -1.6
CCDC71Q8IV32 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC71Q8IV32 MIR4311-201ENST00000580794 100 ntBASIC5.03□□□□□ -1.6
CCDC71Q8IV32 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.03□□□□□ -1.6
CCDC71Q8IV32 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.03□□□□□ -1.6
CCDC71Q8IV32 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
CCDC71Q8IV32 AC009303.3-201ENST00000591103 736 ntBASIC5.03□□□□□ -1.6
CCDC71Q8IV32 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.03□□□□□ -1.6
CCDC71Q8IV32 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.03□□□□□ -1.6
CCDC71Q8IV32 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CCDC71Q8IV32 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC71Q8IV32 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC71Q8IV32 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
CCDC71Q8IV32 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC71Q8IV32 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.03□□□□□ -1.6
CCDC71Q8IV32 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC5.03□□□□□ -1.6
CCDC71Q8IV32 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
CCDC71Q8IV32 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC5.03□□□□□ -1.6
CCDC71Q8IV32 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC71Q8IV32 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
CCDC71Q8IV32 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
CCDC71Q8IV32 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
CCDC71Q8IV32 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC71Q8IV32 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC71Q8IV32 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.02□□□□□ -1.61
CCDC71Q8IV32 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.02□□□□□ -1.61
CCDC71Q8IV32 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC71Q8IV32 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CCDC71Q8IV32 AC114947.2-201ENST00000565748 2125 ntBASIC5.02□□□□□ -1.61
CCDC71Q8IV32 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
CCDC71Q8IV32 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.02□□□□□ -1.61
CCDC71Q8IV32 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.02□□□□□ -1.61
CCDC71Q8IV32 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
CCDC71Q8IV32 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC71Q8IV32 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC71Q8IV32 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC71Q8IV32 RNU4-2-201ENST00000365668 141 ntBASIC5.02□□□□□ -1.61
CCDC71Q8IV32 OR1L6-202ENST00000373684 1044 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms