Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 SCARNA15-201ENST00000607520 4325 ntBASIC4.16□□□□□ -1.74
UPK2O00526 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
UPK2O00526 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
UPK2O00526 OR55B1P-203ENST00000641518 2602 ntBASIC4.16□□□□□ -1.74
UPK2O00526 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.16□□□□□ -1.74
UPK2O00526 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
UPK2O00526 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
UPK2O00526 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.16□□□□□ -1.74
UPK2O00526 CASC19-221ENST00000641309 1382 ntBASIC4.15□□□□□ -1.74
UPK2O00526 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.15□□□□□ -1.74
UPK2O00526 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.74
UPK2O00526 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
UPK2O00526 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
UPK2O00526 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
UPK2O00526 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
UPK2O00526 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC4.15□□□□□ -1.74
UPK2O00526 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
UPK2O00526 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.15□□□□□ -1.74
UPK2O00526 AC100778.3-201ENST00000580060 1750 ntBASIC4.15□□□□□ -1.74
UPK2O00526 AC063976.2-201ENST00000425667 3556 ntBASIC4.15□□□□□ -1.74
UPK2O00526 TMSB4XP4-201ENST00000323496 618 ntBASIC4.15□□□□□ -1.75
UPK2O00526 FIG4-202ENST00000368941 791 ntTSL 3 BASIC4.15□□□□□ -1.75
UPK2O00526 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
UPK2O00526 RNU1-77P-201ENST00000390868 162 ntBASIC4.15□□□□□ -1.75
UPK2O00526 RNU1-149P-201ENST00000390870 161 ntBASIC4.15□□□□□ -1.75
UPK2O00526 RNA5SP339-201ENST00000390987 122 ntBASIC4.15□□□□□ -1.75
UPK2O00526 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC4.15□□□□□ -1.75
UPK2O00526 VN1R31P-201ENST00000417498 730 ntBASIC4.15□□□□□ -1.75
UPK2O00526 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.15□□□□□ -1.75
UPK2O00526 COX6CP13-201ENST00000428703 226 ntBASIC4.15□□□□□ -1.75
UPK2O00526 FAM96AP1-201ENST00000430879 482 ntBASIC4.15□□□□□ -1.75
UPK2O00526 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
UPK2O00526 GTF3AP5-201ENST00000442645 697 ntBASIC4.15□□□□□ -1.75
UPK2O00526 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.15□□□□□ -1.75
UPK2O00526 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
UPK2O00526 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC4.15□□□□□ -1.75
UPK2O00526 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC4.15□□□□□ -1.75
UPK2O00526 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC4.15□□□□□ -1.75
UPK2O00526 RPEP1-201ENST00000504507 658 ntBASIC4.15□□□□□ -1.75
UPK2O00526 AC097173.1-201ENST00000505862 819 ntBASIC4.15□□□□□ -1.75
UPK2O00526 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.15□□□□□ -1.75
UPK2O00526 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC4.15□□□□□ -1.75
UPK2O00526 RNU6-941P-201ENST00000516346 108 ntBASIC4.15□□□□□ -1.75
UPK2O00526 AC105031.1-201ENST00000518550 476 ntBASIC4.15□□□□□ -1.75
UPK2O00526 AC018442.3-201ENST00000523025 183 ntBASIC4.15□□□□□ -1.75
UPK2O00526 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC4.15□□□□□ -1.75
UPK2O00526 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.15□□□□□ -1.75
UPK2O00526 AP001804.2-201ENST00000533932 910 ntBASIC4.15□□□□□ -1.75
UPK2O00526 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.15□□□□□ -1.75
UPK2O00526 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
UPK2O00526 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
UPK2O00526 AC011840.5-201ENST00000582125 771 ntBASIC4.15□□□□□ -1.75
UPK2O00526 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC4.15□□□□□ -1.75
UPK2O00526 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC4.15□□□□□ -1.75
UPK2O00526 SUGT1P3-202ENST00000604259 383 ntBASIC4.15□□□□□ -1.75
UPK2O00526 RNA5SP440-201ENST00000612665 119 ntBASIC4.15□□□□□ -1.75
UPK2O00526 MIR1910-201ENST00000636955 80 ntBASIC4.15□□□□□ -1.75
UPK2O00526 AC135068.12-201ENST00000637370 931 ntBASIC4.15□□□□□ -1.75
UPK2O00526 AC073869.10-201ENST00000642016 354 ntBASIC4.15□□□□□ -1.75
UPK2O00526 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
UPK2O00526 AC003985.2-201ENST00000562268 1669 ntBASIC4.15□□□□□ -1.75
UPK2O00526 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC4.15□□□□□ -1.75
UPK2O00526 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
UPK2O00526 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.75
UPK2O00526 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
UPK2O00526 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
UPK2O00526 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.15□□□□□ -1.75
UPK2O00526 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
UPK2O00526 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
UPK2O00526 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
UPK2O00526 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
UPK2O00526 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
UPK2O00526 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC4.14□□□□□ -1.75
UPK2O00526 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
UPK2O00526 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
UPK2O00526 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC4.14□□□□□ -1.75
UPK2O00526 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
UPK2O00526 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
UPK2O00526 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
UPK2O00526 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.14□□□□□ -1.75
UPK2O00526 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.14□□□□□ -1.75
UPK2O00526 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC4.14□□□□□ -1.75
UPK2O00526 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.14□□□□□ -1.75
UPK2O00526 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.14□□□□□ -1.75
UPK2O00526 U3.3-201ENST00000362986 216 ntBASIC4.14□□□□□ -1.75
UPK2O00526 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
UPK2O00526 U3.32-201ENST00000408116 212 ntBASIC4.14□□□□□ -1.75
UPK2O00526 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.14□□□□□ -1.75
UPK2O00526 AL390774.1-201ENST00000411924 246 ntBASIC4.14□□□□□ -1.75
UPK2O00526 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC4.14□□□□□ -1.75
UPK2O00526 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC4.14□□□□□ -1.75
UPK2O00526 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.14□□□□□ -1.75
UPK2O00526 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC4.14□□□□□ -1.75
UPK2O00526 CYCSP6-201ENST00000434498 302 ntBASIC4.14□□□□□ -1.75
UPK2O00526 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC4.14□□□□□ -1.75
UPK2O00526 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC4.14□□□□□ -1.75
UPK2O00526 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.14□□□□□ -1.75
UPK2O00526 AP000281.1-201ENST00000444036 316 ntBASIC4.14□□□□□ -1.75
UPK2O00526 AL161636.2-201ENST00000445179 927 ntBASIC4.14□□□□□ -1.75
UPK2O00526 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms