Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 BNIP3P35-201ENST00000604530 490 ntBASIC5.24□□□□□ -1.57
CDH17Q12864 AC008833.1-201ENST00000611633 691 ntBASIC5.24□□□□□ -1.57
CDH17Q12864 MIR6837-201ENST00000620884 64 ntBASIC5.24□□□□□ -1.57
CDH17Q12864 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.24□□□□□ -1.57
CDH17Q12864 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.24□□□□□ -1.57
CDH17Q12864 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CDH17Q12864 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.24□□□□□ -1.57
CDH17Q12864 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.24□□□□□ -1.57
CDH17Q12864 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CDH17Q12864 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CDH17Q12864 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
CDH17Q12864 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CDH17Q12864 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
CDH17Q12864 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
CDH17Q12864 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
CDH17Q12864 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CDH17Q12864 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
CDH17Q12864 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.23□□□□□ -1.57
CDH17Q12864 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.23□□□□□ -1.57
CDH17Q12864 BRAFP1-201ENST00000445336 2703 ntBASIC5.23□□□□□ -1.57
CDH17Q12864 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CDH17Q12864 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.23□□□□□ -1.57
CDH17Q12864 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CDH17Q12864 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.23□□□□□ -1.57
CDH17Q12864 RNA5SP183-201ENST00000362452 119 ntBASIC5.23□□□□□ -1.57
CDH17Q12864 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CDH17Q12864 AC007068.1-201ENST00000396690 844 ntBASIC5.23□□□□□ -1.57
CDH17Q12864 NUDT19P3-201ENST00000404698 555 ntBASIC5.23□□□□□ -1.57
CDH17Q12864 OR3A2-201ENST00000408891 1076 ntBASIC5.23□□□□□ -1.57
CDH17Q12864 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.23□□□□□ -1.57
CDH17Q12864 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.23□□□□□ -1.57
CDH17Q12864 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC5.23□□□□□ -1.57
CDH17Q12864 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.23□□□□□ -1.57
CDH17Q12864 MARK2P12-201ENST00000420129 585 ntBASIC5.23□□□□□ -1.57
CDH17Q12864 RPL7L1P9-201ENST00000431298 745 ntBASIC5.23□□□□□ -1.57
CDH17Q12864 RPL12P11-201ENST00000439970 501 ntBASIC5.23□□□□□ -1.57
CDH17Q12864 TCEA1P3-201ENST00000443005 880 ntBASIC5.23□□□□□ -1.57
CDH17Q12864 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.23□□□□□ -1.57
CDH17Q12864 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.23□□□□□ -1.57
CDH17Q12864 BX510359.5-201ENST00000515651 304 ntBASIC5.23□□□□□ -1.57
CDH17Q12864 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.23□□□□□ -1.57
CDH17Q12864 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.23□□□□□ -1.57
CDH17Q12864 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.23□□□□□ -1.57
CDH17Q12864 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CDH17Q12864 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.23□□□□□ -1.57
CDH17Q12864 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.23□□□□□ -1.57
CDH17Q12864 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.23□□□□□ -1.57
CDH17Q12864 MIR4310-201ENST00000582950 57 ntBASIC5.23□□□□□ -1.57
CDH17Q12864 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC5.23□□□□□ -1.57
CDH17Q12864 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.23□□□□□ -1.57
CDH17Q12864 AC109309.2-201ENST00000612597 332 ntBASIC5.23□□□□□ -1.57
CDH17Q12864 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.23□□□□□ -1.57
CDH17Q12864 AC108359.1-201ENST00000616451 1211 ntBASIC5.23□□□□□ -1.57
CDH17Q12864 AL122125.1-201ENST00000616999 600 ntBASIC5.23□□□□□ -1.57
CDH17Q12864 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.23□□□□□ -1.57
CDH17Q12864 AC136428.4-201ENST00000634254 1155 ntBASIC5.23□□□□□ -1.57
CDH17Q12864 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.23□□□□□ -1.57
CDH17Q12864 CASC19-221ENST00000641309 1382 ntBASIC5.23□□□□□ -1.57
CDH17Q12864 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CDH17Q12864 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
CDH17Q12864 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.23□□□□□ -1.57
CDH17Q12864 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CDH17Q12864 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
CDH17Q12864 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
CDH17Q12864 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CDH17Q12864 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
CDH17Q12864 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.22□□□□□ -1.57
CDH17Q12864 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
CDH17Q12864 AL035079.1-201ENST00000405210 287 ntBASIC5.22□□□□□ -1.57
CDH17Q12864 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.22□□□□□ -1.57
CDH17Q12864 RN7SKP59-201ENST00000410520 314 ntBASIC5.22□□□□□ -1.57
CDH17Q12864 AC234781.4-201ENST00000419384 244 ntBASIC5.22□□□□□ -1.57
CDH17Q12864 AC108075.1-201ENST00000424692 529 ntBASIC5.22□□□□□ -1.57
CDH17Q12864 RPS4XP16-201ENST00000427198 791 ntBASIC5.22□□□□□ -1.57
CDH17Q12864 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.22□□□□□ -1.57
CDH17Q12864 SIAH1P1-201ENST00000479411 923 ntBASIC5.22□□□□□ -1.57
CDH17Q12864 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.22□□□□□ -1.57
CDH17Q12864 AC104109.1-201ENST00000498563 436 ntBASIC5.22□□□□□ -1.57
CDH17Q12864 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.22□□□□□ -1.57
CDH17Q12864 RN7SKP5-201ENST00000517045 272 ntBASIC5.22□□□□□ -1.57
CDH17Q12864 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.22□□□□□ -1.57
CDH17Q12864 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.22□□□□□ -1.57
CDH17Q12864 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.22□□□□□ -1.57
CDH17Q12864 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
CDH17Q12864 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.22□□□□□ -1.57
CDH17Q12864 AL049779.2-201ENST00000553847 315 ntBASIC5.22□□□□□ -1.57
CDH17Q12864 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CDH17Q12864 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.22□□□□□ -1.57
CDH17Q12864 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.22□□□□□ -1.57
CDH17Q12864 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.22□□□□□ -1.57
CDH17Q12864 AC090527.3-201ENST00000619041 548 ntBASIC5.22□□□□□ -1.57
CDH17Q12864 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.22□□□□□ -1.57
CDH17Q12864 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.22□□□□□ -1.57
CDH17Q12864 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.22□□□□□ -1.57
CDH17Q12864 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.22□□□□□ -1.57
CDH17Q12864 CASC19-264ENST00000641912 1184 ntBASIC5.22□□□□□ -1.57
CDH17Q12864 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CDH17Q12864 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
CDH17Q12864 AC092111.2-201ENST00000611627 1414 ntBASIC5.22□□□□□ -1.57
CDH17Q12864 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms