Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC4.65□□□□□ -1.67
HLA-DPB1P04440 AC009238.2-201ENST00000431026 355 ntBASIC4.65□□□□□ -1.67
HLA-DPB1P04440 AL161722.2-201ENST00000434731 981 ntBASIC4.65□□□□□ -1.67
HLA-DPB1P04440 EIF4A1P6-201ENST00000448133 1210 ntBASIC4.65□□□□□ -1.67
HLA-DPB1P04440 RN7SL174P-201ENST00000475578 289 ntBASIC4.65□□□□□ -1.67
HLA-DPB1P04440 AC012123.2-201ENST00000485809 248 ntBASIC4.65□□□□□ -1.67
HLA-DPB1P04440 RN7SL447P-201ENST00000494711 245 ntBASIC4.65□□□□□ -1.67
HLA-DPB1P04440 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.65□□□□□ -1.67
HLA-DPB1P04440 AC073358.1-201ENST00000505671 684 ntBASIC4.65□□□□□ -1.67
HLA-DPB1P04440 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.67
HLA-DPB1P04440 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC4.65□□□□□ -1.67
HLA-DPB1P04440 SCARNA16.4-201ENST00000516956 187 ntBASIC4.65□□□□□ -1.67
HLA-DPB1P04440 OR5D2P-201ENST00000524390 911 ntBASIC4.65□□□□□ -1.67
HLA-DPB1P04440 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
HLA-DPB1P04440 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
HLA-DPB1P04440 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
HLA-DPB1P04440 AL390726.5-202ENST00000564800 256 ntBASIC4.65□□□□□ -1.67
HLA-DPB1P04440 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
HLA-DPB1P04440 AC005341.1-201ENST00000571086 708 ntBASIC4.65□□□□□ -1.67
HLA-DPB1P04440 RN7SL708P-201ENST00000580952 299 ntBASIC4.65□□□□□ -1.67
HLA-DPB1P04440 AL589674.2-201ENST00000604304 337 ntBASIC4.65□□□□□ -1.67
HLA-DPB1P04440 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.65□□□□□ -1.67
HLA-DPB1P04440 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.65□□□□□ -1.67
HLA-DPB1P04440 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
HLA-DPB1P04440 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC4.65□□□□□ -1.67
HLA-DPB1P04440 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
HLA-DPB1P04440 SCN1A-220ENST00000641603 12506 ntBASIC4.64□□□□□ -1.67
HLA-DPB1P04440 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HLA-DPB1P04440 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HLA-DPB1P04440 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
HLA-DPB1P04440 NEAT1-202ENST00000501122 22743 ntBASIC4.64□□□□□ -1.67
HLA-DPB1P04440 AC083843.2-201ENST00000568248 6253 ntBASIC4.64□□□□□ -1.67
HLA-DPB1P04440 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
HLA-DPB1P04440 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.64□□□□□ -1.67
HLA-DPB1P04440 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HLA-DPB1P04440 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HLA-DPB1P04440 OR4G1P-202ENST00000641173 1788 ntBASIC4.64□□□□□ -1.67
HLA-DPB1P04440 OR5AQ1P-203ENST00000641818 1529 ntBASIC4.64□□□□□ -1.67
HLA-DPB1P04440 RN7SKP293-201ENST00000411389 296 ntBASIC4.64□□□□□ -1.67
HLA-DPB1P04440 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC4.64□□□□□ -1.67
HLA-DPB1P04440 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HLA-DPB1P04440 DPPA2P2-201ENST00000418220 897 ntBASIC4.64□□□□□ -1.67
HLA-DPB1P04440 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC4.64□□□□□ -1.67
HLA-DPB1P04440 GSTM5P1-201ENST00000434751 660 ntBASIC4.64□□□□□ -1.67
HLA-DPB1P04440 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.64□□□□□ -1.67
HLA-DPB1P04440 AL035090.1-201ENST00000454835 332 ntBASIC4.64□□□□□ -1.67
HLA-DPB1P04440 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC4.64□□□□□ -1.67
HLA-DPB1P04440 GYG1P1-201ENST00000460864 698 ntBASIC4.64□□□□□ -1.67
HLA-DPB1P04440 AC100832.1-201ENST00000471945 383 ntBASIC4.64□□□□□ -1.67
HLA-DPB1P04440 AC090589.1-201ENST00000473109 362 ntBASIC4.64□□□□□ -1.67
HLA-DPB1P04440 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.64□□□□□ -1.67
HLA-DPB1P04440 RN7SL346P-201ENST00000491561 294 ntBASIC4.64□□□□□ -1.67
HLA-DPB1P04440 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC4.64□□□□□ -1.67
HLA-DPB1P04440 RNA5SP362-201ENST00000516048 118 ntBASIC4.64□□□□□ -1.67
HLA-DPB1P04440 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC4.64□□□□□ -1.67
HLA-DPB1P04440 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.64□□□□□ -1.67
HLA-DPB1P04440 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.64□□□□□ -1.67
HLA-DPB1P04440 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
HLA-DPB1P04440 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC4.64□□□□□ -1.67
HLA-DPB1P04440 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC4.64□□□□□ -1.67
HLA-DPB1P04440 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC4.64□□□□□ -1.67
HLA-DPB1P04440 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC4.64□□□□□ -1.67
HLA-DPB1P04440 AC005252.1-201ENST00000604518 1063 ntBASIC4.64□□□□□ -1.67
HLA-DPB1P04440 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC4.64□□□□□ -1.67
HLA-DPB1P04440 AC010245.2-201ENST00000606908 1167 ntBASIC4.64□□□□□ -1.67
HLA-DPB1P04440 AC000068.2-201ENST00000608816 460 ntBASIC4.64□□□□□ -1.67
HLA-DPB1P04440 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
HLA-DPB1P04440 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.64□□□□□ -1.67
HLA-DPB1P04440 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HLA-DPB1P04440 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
HLA-DPB1P04440 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HLA-DPB1P04440 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.64□□□□□ -1.67
HLA-DPB1P04440 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
HLA-DPB1P04440 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
HLA-DPB1P04440 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
HLA-DPB1P04440 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HLA-DPB1P04440 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.64□□□□□ -1.67
HLA-DPB1P04440 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DPB1P04440 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.63□□□□□ -1.67
HLA-DPB1P04440 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DPB1P04440 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DPB1P04440 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DPB1P04440 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DPB1P04440 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
HLA-DPB1P04440 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
HLA-DPB1P04440 BPHL-201ENST00000380368 797 ntTSL 5 BASIC4.63□□□□□ -1.67
HLA-DPB1P04440 RNU1-77P-201ENST00000390868 162 ntBASIC4.63□□□□□ -1.67
HLA-DPB1P04440 AL050305.1-201ENST00000399993 1230 ntBASIC4.63□□□□□ -1.67
HLA-DPB1P04440 HSPA8P15-201ENST00000401676 786 ntBASIC4.63□□□□□ -1.67
HLA-DPB1P04440 NPM1P38-201ENST00000403835 865 ntBASIC4.63□□□□□ -1.67
HLA-DPB1P04440 AL133388.1-201ENST00000404509 287 ntBASIC4.63□□□□□ -1.67
HLA-DPB1P04440 AC012519.1-201ENST00000424588 610 ntBASIC4.63□□□□□ -1.67
HLA-DPB1P04440 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DPB1P04440 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC4.63□□□□□ -1.67
HLA-DPB1P04440 AC105399.1-202ENST00000447303 205 ntBASIC4.63□□□□□ -1.67
HLA-DPB1P04440 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC4.63□□□□□ -1.67
HLA-DPB1P04440 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.63□□□□□ -1.67
HLA-DPB1P04440 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC4.63□□□□□ -1.67
HLA-DPB1P04440 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC4.63□□□□□ -1.67
HLA-DPB1P04440 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 134.7 ms