Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 MTND1P28-201ENST00000435623 950 ntBASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 DNAJC19P4-201ENST00000440115 345 ntBASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 USP9YP8-201ENST00000441913 500 ntBASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 AC005002.1-201ENST00000447458 540 ntBASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 MTND6P5-201ENST00000448266 512 ntBASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 RPS3AP17-201ENST00000472594 777 ntBASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 MTND6P6-201ENST00000478031 263 ntBASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 AC079841.1-201ENST00000481228 950 ntBASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 RPL24-206ENST00000495401 478 ntTSL 2 BASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 SNX18P23-201ENST00000510867 677 ntBASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 OR8L1P-201ENST00000534005 955 ntBASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 MT1B-202ENST00000562399 351 ntTSL 3 BASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 RPL17-208ENST00000580261 669 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 LRRC77P-213ENST00000637727 880 ntBASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 AP2B1-221ENST00000621914 5702 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 LINC01653-201ENST00000456026 1728 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 MGAT4A-202ENST00000393487 8382 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 HNRNPA2B1-201ENST00000354667 3664 ntAPPRIS ALT1 TSL 1 (best) BASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 AC129502.1-201ENST00000623261 1654 ntBASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 NCKAP1L-201ENST00000293373 9016 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 LINC02535-201ENST00000455071 2513 ntTSL 2 BASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 YES1-203ENST00000577961 4554 ntTSL 5 BASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 OR2A5-202ENST00000641693 8681 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 POGK-201ENST00000367875 6254 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 TLN2-209ENST00000561311 11880 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 CASR-205ENST00000639785 10047 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 STOM-201ENST00000286713 3010 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 RAB11A-201ENST00000261890 4930 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 RNU6-660P-201ENST00000364566 109 ntBASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 RN7SKP226-201ENST00000364912 300 ntBASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 RPL34-202ENST00000394667 441 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 USP9YP20-201ENST00000419224 558 ntBASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 AC079355.1-201ENST00000421770 223 ntBASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 GAPDHP57-201ENST00000424400 585 ntBASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 AC023512.1-201ENST00000444513 499 ntBASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 HMGB1P16-201ENST00000447155 540 ntBASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 VNN3-210ENST00000450865 596 ntTSL 4 BASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 COX6B1P2-201ENST00000489624 230 ntBASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 AL390198.2-201ENST00000510553 222 ntBASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 RPL3P13-201ENST00000550415 216 ntBASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 CFL2-206ENST00000556161 546 ntTSL 4 BASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 CT45A7-201ENST00000610598 996 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 AL353726.1-201ENST00000614041 1000 ntBASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 AC004836.1-201ENST00000623032 634 ntBASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 AC011815.3-201ENST00000624194 473 ntBASIC8.29□□□□□ -1.08
ZC3H4Q9UPT8 SLC7A2-203ENST00000470360 7638 ntAPPRIS P3 TSL 5 BASIC8.28□□□□□ -1.08
ZC3H4Q9UPT8 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
ZC3H4Q9UPT8 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
ZC3H4Q9UPT8 TRIM55-202ENST00000315962 2914 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
ZC3H4Q9UPT8 UTY-202ENST00000331397 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
ZC3H4Q9UPT8 PSG9-206ENST00000593948 1429 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
ZC3H4Q9UPT8 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC8.28□□□□□ -1.08
ZC3H4Q9UPT8 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC8.28□□□□□ -1.08
ZC3H4Q9UPT8 IL31RA-207ENST00000490985 2414 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
ZC3H4Q9UPT8 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC8.28□□□□□ -1.08
ZC3H4Q9UPT8 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
ZC3H4Q9UPT8 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
ZC3H4Q9UPT8 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
ZC3H4Q9UPT8 AC092326.2-201ENST00000624772 1561 ntBASIC8.28□□□□□ -1.08
ZC3H4Q9UPT8 AC027279.1-201ENST00000568885 4284 ntBASIC8.28□□□□□ -1.08
ZC3H4Q9UPT8 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC8.28□□□□□ -1.08
ZC3H4Q9UPT8 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC8.28□□□□□ -1.08
ZC3H4Q9UPT8 ABCA11P-202ENST00000504019 2110 ntBASIC8.28□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 174.1 ms