Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC9.73□□□□□ -0.85
PHF8Q9UPP1 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC9.73□□□□□ -0.85
PHF8Q9UPP1 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC9.73□□□□□ -0.85
PHF8Q9UPP1 AC026458.1-201ENST00000564330 438 ntBASIC9.73□□□□□ -0.85
PHF8Q9UPP1 MT1CP-201ENST00000567054 174 ntBASIC9.73□□□□□ -0.85
PHF8Q9UPP1 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC9.73□□□□□ -0.85
PHF8Q9UPP1 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
PHF8Q9UPP1 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC9.73□□□□□ -0.85
PHF8Q9UPP1 AL683826.1-201ENST00000624104 627 ntBASIC9.73□□□□□ -0.85
PHF8Q9UPP1 AC068213.1-201ENST00000625124 226 ntBASIC9.73□□□□□ -0.85
PHF8Q9UPP1 AC027559.1-201ENST00000636288 271 ntBASIC9.73□□□□□ -0.85
PHF8Q9UPP1 ZNF23-204ENST00000428724 1932 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
PHF8Q9UPP1 CHD2-201ENST00000394196 9363 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
PHF8Q9UPP1 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
PHF8Q9UPP1 CCDC162P-214ENST00000640755 1958 ntTSL 5 BASIC9.73□□□□□ -0.85
PHF8Q9UPP1 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC9.73□□□□□ -0.85
PHF8Q9UPP1 GON4L-217ENST00000615926 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
PHF8Q9UPP1 LARP1BP1-201ENST00000506036 1359 ntBASIC9.73□□□□□ -0.85
PHF8Q9UPP1 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC9.73□□□□□ -0.85
PHF8Q9UPP1 CASK-204ENST00000378166 3123 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
PHF8Q9UPP1 AC078795.1-201ENST00000602342 3143 ntBASIC9.73□□□□□ -0.85
PHF8Q9UPP1 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
PHF8Q9UPP1 ERCC4-201ENST00000311895 6758 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
PHF8Q9UPP1 RNF139-AS1-201ENST00000499418 5654 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
PHF8Q9UPP1 SHROOM4-202ENST00000376020 9556 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
PHF8Q9UPP1 AL031985.3-201ENST00000565390 2449 ntBASIC9.72□□□□□ -0.85
PHF8Q9UPP1 PTPRT-204ENST00000373190 12559 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
PHF8Q9UPP1 NSRP1P1-201ENST00000444067 1693 ntBASIC9.72□□□□□ -0.85
PHF8Q9UPP1 OR11G2-202ENST00000641682 3786 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
PHF8Q9UPP1 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
PHF8Q9UPP1 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
PHF8Q9UPP1 RNY3P3-201ENST00000363816 102 ntBASIC9.72□□□□□ -0.85
PHF8Q9UPP1 RNA5SP85-201ENST00000365378 119 ntBASIC9.72□□□□□ -0.85
PHF8Q9UPP1 SNORA33.2-201ENST00000365413 134 ntBASIC9.72□□□□□ -0.85
PHF8Q9UPP1 RN7SKP269-201ENST00000365545 319 ntBASIC9.72□□□□□ -0.85
PHF8Q9UPP1 SNORA51.12-201ENST00000384448 134 ntBASIC9.72□□□□□ -0.85
PHF8Q9UPP1 FDPSP5-201ENST00000399474 1057 ntBASIC9.72□□□□□ -0.85
PHF8Q9UPP1 AL359715.1-201ENST00000404330 555 ntBASIC9.72□□□□□ -0.85
PHF8Q9UPP1 MIR1282-201ENST00000408865 101 ntBASIC9.72□□□□□ -0.85
PHF8Q9UPP1 RN7SKP32-201ENST00000410167 303 ntBASIC9.72□□□□□ -0.85
PHF8Q9UPP1 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC9.72□□□□□ -0.85
PHF8Q9UPP1 AC004690.1-201ENST00000418216 328 ntBASIC9.72□□□□□ -0.85
PHF8Q9UPP1 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC9.72□□□□□ -0.85
PHF8Q9UPP1 CYCSP11-201ENST00000436426 315 ntBASIC9.72□□□□□ -0.85
PHF8Q9UPP1 MYL6P3-201ENST00000436904 432 ntBASIC9.72□□□□□ -0.85
PHF8Q9UPP1 AC016691.1-201ENST00000441321 413 ntBASIC9.72□□□□□ -0.85
PHF8Q9UPP1 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC9.72□□□□□ -0.85
PHF8Q9UPP1 AC118758.1-202ENST00000454719 225 ntBASIC9.72□□□□□ -0.85
PHF8Q9UPP1 PSPC1P2-201ENST00000455130 225 ntBASIC9.72□□□□□ -0.85
PHF8Q9UPP1 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC9.72□□□□□ -0.85
PHF8Q9UPP1 RN7SL37P-201ENST00000490461 307 ntBASIC9.72□□□□□ -0.85
PHF8Q9UPP1 AC012170.1-201ENST00000495139 359 ntBASIC9.72□□□□□ -0.85
PHF8Q9UPP1 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC9.72□□□□□ -0.85
PHF8Q9UPP1 AC139783.2-201ENST00000504847 1145 ntBASIC9.72□□□□□ -0.85
PHF8Q9UPP1 AF131216.2-201ENST00000512316 564 ntBASIC9.72□□□□□ -0.85
PHF8Q9UPP1 NPM1P21-201ENST00000513394 762 ntBASIC9.72□□□□□ -0.85
PHF8Q9UPP1 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC9.72□□□□□ -0.85
PHF8Q9UPP1 ELOCP31-201ENST00000540463 467 ntBASIC9.72□□□□□ -0.85
PHF8Q9UPP1 WDR61-205ENST00000558459 884 ntTSL 3 BASIC9.72□□□□□ -0.85
PHF8Q9UPP1 AC110588.1-201ENST00000559699 137 ntBASIC9.72□□□□□ -0.85
PHF8Q9UPP1 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC9.72□□□□□ -0.85
PHF8Q9UPP1 AC136618.2-201ENST00000575091 400 ntBASIC9.72□□□□□ -0.85
PHF8Q9UPP1 AC011453.2-201ENST00000603737 729 ntBASIC9.72□□□□□ -0.85
PHF8Q9UPP1 AC112191.3-201ENST00000604371 277 ntBASIC9.72□□□□□ -0.85
PHF8Q9UPP1 AC063962.1-201ENST00000608199 521 ntBASIC9.72□□□□□ -0.85
PHF8Q9UPP1 RMST_7.1-201ENST00000621935 268 ntBASIC9.72□□□□□ -0.85
PHF8Q9UPP1 AC139792.3-201ENST00000623525 224 ntBASIC9.72□□□□□ -0.85
PHF8Q9UPP1 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC9.72□□□□□ -0.85
PHF8Q9UPP1 AC011447.6-201ENST00000623510 2598 ntBASIC9.72□□□□□ -0.85
PHF8Q9UPP1 AC008937.3-201ENST00000606813 1700 ntBASIC9.72□□□□□ -0.85
PHF8Q9UPP1 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC9.72□□□□□ -0.85
PHF8Q9UPP1 CR1-206ENST00000400960 6959 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
PHF8Q9UPP1 MACROD2-202ENST00000378058 4025 ntTSL 2 BASIC9.72□□□□□ -0.85
PHF8Q9UPP1 UBN2-201ENST00000473989 14444 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
PHF8Q9UPP1 CFAP65-201ENST00000295729 2259 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
PHF8Q9UPP1 AL353753.1-201ENST00000612217 2320 ntTSL 2 BASIC9.72□□□□□ -0.85
PHF8Q9UPP1 MEF2A-203ENST00000449277 5182 ntTSL 5 BASIC9.72□□□□□ -0.85
PHF8Q9UPP1 ZNF667-202ENST00000504904 4390 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
PHF8Q9UPP1 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
PHF8Q9UPP1 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
PHF8Q9UPP1 TEX14-201ENST00000240361 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
PHF8Q9UPP1 AMBRA1-206ENST00000528950 4102 ntTSL 5 BASIC9.71□□□□□ -0.85
PHF8Q9UPP1 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
PHF8Q9UPP1 ACOD1-201ENST00000377462 2165 ntAPPRIS P2 TSL 5 BASIC9.71□□□□□ -0.85
PHF8Q9UPP1 ZNF812P-201ENST00000457674 1694 ntBASIC9.71□□□□□ -0.85
PHF8Q9UPP1 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.85
PHF8Q9UPP1 TMEM135-202ENST00000340353 3938 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
PHF8Q9UPP1 ZNF19-210ENST00000567225 2838 ntTSL 3 BASIC9.71□□□□□ -0.85
PHF8Q9UPP1 LGI1-211ENST00000630047 1751 ntTSL 2 BASIC9.71□□□□□ -0.85
PHF8Q9UPP1 AL133320.1-201ENST00000621423 2352 ntBASIC9.71□□□□□ -0.85
PHF8Q9UPP1 EXOC6-201ENST00000260762 3564 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
PHF8Q9UPP1 IQGAP1-201ENST00000268182 7233 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
PHF8Q9UPP1 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
PHF8Q9UPP1 HSPA8P11-201ENST00000508840 1898 ntBASIC9.71□□□□□ -0.85
PHF8Q9UPP1 KIAA1324L-203ENST00000416314 3179 ntAPPRIS P3 TSL 2 BASIC9.71□□□□□ -0.86
PHF8Q9UPP1 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
PHF8Q9UPP1 ENSAP3-201ENST00000312710 333 ntBASIC9.71□□□□□ -0.86
PHF8Q9UPP1 RNU5D-1-201ENST00000363299 116 ntBASIC9.71□□□□□ -0.86
PHF8Q9UPP1 RNU1-65P-201ENST00000363919 148 ntBASIC9.71□□□□□ -0.86
PHF8Q9UPP1 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC9.71□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms