Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 AC008549.1-201ENST00000512900 643 ntBASIC5.69□□□□□ -1.5
PARPBPQ9NWS1 RN7SKP67-201ENST00000515905 235 ntBASIC5.69□□□□□ -1.5
PARPBPQ9NWS1 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.69□□□□□ -1.5
PARPBPQ9NWS1 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC5.69□□□□□ -1.5
PARPBPQ9NWS1 KCTD9P6-201ENST00000522306 950 ntBASIC5.69□□□□□ -1.5
PARPBPQ9NWS1 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC5.69□□□□□ -1.5
PARPBPQ9NWS1 AL133399.1-201ENST00000527476 298 ntBASIC5.69□□□□□ -1.5
PARPBPQ9NWS1 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PARPBPQ9NWS1 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC5.69□□□□□ -1.5
PARPBPQ9NWS1 OR5AM1P-201ENST00000532136 1032 ntBASIC5.69□□□□□ -1.5
PARPBPQ9NWS1 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC5.69□□□□□ -1.5
PARPBPQ9NWS1 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.69□□□□□ -1.5
PARPBPQ9NWS1 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.69□□□□□ -1.5
PARPBPQ9NWS1 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC5.69□□□□□ -1.5
PARPBPQ9NWS1 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PARPBPQ9NWS1 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC5.69□□□□□ -1.5
PARPBPQ9NWS1 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC5.69□□□□□ -1.5
PARPBPQ9NWS1 CBX3P2-202ENST00000583365 535 ntBASIC5.69□□□□□ -1.5
PARPBPQ9NWS1 AC012254.4-201ENST00000588843 273 ntBASIC5.69□□□□□ -1.5
PARPBPQ9NWS1 IGKV1OR2-9-201ENST00000603957 287 ntBASIC5.69□□□□□ -1.5
PARPBPQ9NWS1 IGKV1OR2-11-201ENST00000604120 287 ntBASIC5.69□□□□□ -1.5
PARPBPQ9NWS1 AC010738.1-201ENST00000604970 987 ntBASIC5.69□□□□□ -1.5
PARPBPQ9NWS1 AL357078.3-201ENST00000607528 618 ntBASIC5.69□□□□□ -1.5
PARPBPQ9NWS1 AC015819.1-201ENST00000613588 663 ntBASIC5.69□□□□□ -1.5
PARPBPQ9NWS1 AL158062.1-201ENST00000619632 745 ntBASIC5.69□□□□□ -1.5
PARPBPQ9NWS1 AC018755.4-201ENST00000619715 454 ntBASIC5.69□□□□□ -1.5
PARPBPQ9NWS1 RBM12B-AS1-201ENST00000623283 653 ntBASIC5.69□□□□□ -1.5
PARPBPQ9NWS1 AC092656.1-203ENST00000624134 423 ntBASIC5.69□□□□□ -1.5
PARPBPQ9NWS1 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
PARPBPQ9NWS1 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC5.69□□□□□ -1.5
PARPBPQ9NWS1 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PARPBPQ9NWS1 AC068769.1-201ENST00000474767 2426 ntBASIC5.69□□□□□ -1.5
PARPBPQ9NWS1 AL157831.2-201ENST00000564681 3095 ntBASIC5.69□□□□□ -1.5
PARPBPQ9NWS1 AL359694.2-201ENST00000567753 1615 ntBASIC5.69□□□□□ -1.5
PARPBPQ9NWS1 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
PARPBPQ9NWS1 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PARPBPQ9NWS1 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PARPBPQ9NWS1 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PARPBPQ9NWS1 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PARPBPQ9NWS1 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
PARPBPQ9NWS1 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
PARPBPQ9NWS1 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
PARPBPQ9NWS1 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
PARPBPQ9NWS1 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.69□□□□□ -1.5
PARPBPQ9NWS1 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC5.69□□□□□ -1.5
PARPBPQ9NWS1 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.69□□□□□ -1.5
PARPBPQ9NWS1 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PARPBPQ9NWS1 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PARPBPQ9NWS1 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.68□□□□□ -1.5
PARPBPQ9NWS1 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PARPBPQ9NWS1 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PARPBPQ9NWS1 AC005225.5-201ENST00000623547 2225 ntBASIC5.68□□□□□ -1.5
PARPBPQ9NWS1 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.68□□□□□ -1.5
PARPBPQ9NWS1 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PARPBPQ9NWS1 CASC19-281ENST00000642118 1554 ntBASIC5.68□□□□□ -1.5
PARPBPQ9NWS1 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.68□□□□□ -1.5
PARPBPQ9NWS1 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
PARPBPQ9NWS1 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PARPBPQ9NWS1 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PARPBPQ9NWS1 Y_RNA.3-201ENST00000362331 103 ntBASIC5.68□□□□□ -1.5
PARPBPQ9NWS1 SNORD35A-201ENST00000363389 86 ntBASIC5.68□□□□□ -1.5
PARPBPQ9NWS1 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
PARPBPQ9NWS1 YWHAZP4-201ENST00000392459 708 ntBASIC5.68□□□□□ -1.5
PARPBPQ9NWS1 SMARCE1P6-201ENST00000398372 1216 ntBASIC5.68□□□□□ -1.5
PARPBPQ9NWS1 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC5.68□□□□□ -1.5
PARPBPQ9NWS1 ELOCP17-201ENST00000414751 326 ntBASIC5.68□□□□□ -1.5
PARPBPQ9NWS1 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PARPBPQ9NWS1 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.68□□□□□ -1.5
PARPBPQ9NWS1 C1DP1-201ENST00000426049 402 ntBASIC5.68□□□□□ -1.5
PARPBPQ9NWS1 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC5.68□□□□□ -1.5
PARPBPQ9NWS1 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.68□□□□□ -1.5
PARPBPQ9NWS1 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC5.68□□□□□ -1.5
PARPBPQ9NWS1 NEK4P1-201ENST00000433383 879 ntBASIC5.68□□□□□ -1.5
PARPBPQ9NWS1 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC5.68□□□□□ -1.5
PARPBPQ9NWS1 AC129850.1-201ENST00000436203 508 ntBASIC5.68□□□□□ -1.5
PARPBPQ9NWS1 AC013403.1-201ENST00000436954 263 ntBASIC5.68□□□□□ -1.5
PARPBPQ9NWS1 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC5.68□□□□□ -1.5
PARPBPQ9NWS1 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC5.68□□□□□ -1.5
PARPBPQ9NWS1 AC097262.1-201ENST00000452559 548 ntBASIC5.68□□□□□ -1.5
PARPBPQ9NWS1 CCNJP2-201ENST00000457810 1163 ntBASIC5.68□□□□□ -1.5
PARPBPQ9NWS1 RN7SL39P-201ENST00000462264 297 ntBASIC5.68□□□□□ -1.5
PARPBPQ9NWS1 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.68□□□□□ -1.5
PARPBPQ9NWS1 AC105918.1-201ENST00000474399 838 ntBASIC5.68□□□□□ -1.5
PARPBPQ9NWS1 PFN2-209ENST00000481275 560 ntTSL 4 BASIC5.68□□□□□ -1.5
PARPBPQ9NWS1 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC5.68□□□□□ -1.5
PARPBPQ9NWS1 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC5.68□□□□□ -1.5
PARPBPQ9NWS1 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.68□□□□□ -1.5
PARPBPQ9NWS1 AC093815.1-201ENST00000508637 280 ntBASIC5.68□□□□□ -1.5
PARPBPQ9NWS1 KHDC1P1-201ENST00000511053 508 ntBASIC5.68□□□□□ -1.5
PARPBPQ9NWS1 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.68□□□□□ -1.5
PARPBPQ9NWS1 RNA5SP418-201ENST00000515951 117 ntBASIC5.68□□□□□ -1.5
PARPBPQ9NWS1 COX6B1P4-201ENST00000519826 484 ntBASIC5.68□□□□□ -1.5
PARPBPQ9NWS1 IGHV4-55-201ENST00000520889 368 ntBASIC5.68□□□□□ -1.5
PARPBPQ9NWS1 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC5.68□□□□□ -1.5
PARPBPQ9NWS1 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
PARPBPQ9NWS1 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.68□□□□□ -1.5
PARPBPQ9NWS1 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.68□□□□□ -1.5
PARPBPQ9NWS1 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC5.68□□□□□ -1.5
PARPBPQ9NWS1 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.68□□□□□ -1.5
PARPBPQ9NWS1 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms