Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
VIPAS39Q9H9C1 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
VIPAS39Q9H9C1 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.33□□□□□ -1.56
VIPAS39Q9H9C1 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
VIPAS39Q9H9C1 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
VIPAS39Q9H9C1 AC093225.1-201ENST00000506867 1408 ntBASIC5.32□□□□□ -1.56
VIPAS39Q9H9C1 CASC19-206ENST00000641028 1430 ntBASIC5.32□□□□□ -1.56
VIPAS39Q9H9C1 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
VIPAS39Q9H9C1 THAP12P8-201ENST00000447914 2115 ntBASIC5.32□□□□□ -1.56
VIPAS39Q9H9C1 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
VIPAS39Q9H9C1 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
VIPAS39Q9H9C1 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
VIPAS39Q9H9C1 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.32□□□□□ -1.56
VIPAS39Q9H9C1 AL133260.1-201ENST00000405720 405 ntBASIC5.32□□□□□ -1.56
VIPAS39Q9H9C1 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC5.32□□□□□ -1.56
VIPAS39Q9H9C1 AL445213.1-201ENST00000412589 747 ntBASIC5.32□□□□□ -1.56
VIPAS39Q9H9C1 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC5.32□□□□□ -1.56
VIPAS39Q9H9C1 CYCSP10-201ENST00000417973 294 ntBASIC5.32□□□□□ -1.56
VIPAS39Q9H9C1 RPL12P43-201ENST00000420608 499 ntBASIC5.32□□□□□ -1.56
VIPAS39Q9H9C1 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC5.32□□□□□ -1.56
VIPAS39Q9H9C1 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.32□□□□□ -1.56
VIPAS39Q9H9C1 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
VIPAS39Q9H9C1 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.32□□□□□ -1.56
VIPAS39Q9H9C1 RPS26P2-201ENST00000440331 348 ntBASIC5.32□□□□□ -1.56
VIPAS39Q9H9C1 UBQLN1P1-207ENST00000441056 1169 ntBASIC5.32□□□□□ -1.56
VIPAS39Q9H9C1 AL356121.1-201ENST00000442911 156 ntBASIC5.32□□□□□ -1.56
VIPAS39Q9H9C1 AC245291.3-201ENST00000443400 292 ntBASIC5.32□□□□□ -1.56
VIPAS39Q9H9C1 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC5.32□□□□□ -1.56
VIPAS39Q9H9C1 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.32□□□□□ -1.56
VIPAS39Q9H9C1 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
VIPAS39Q9H9C1 VDAC2P4-201ENST00000452925 711 ntBASIC5.32□□□□□ -1.56
VIPAS39Q9H9C1 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.32□□□□□ -1.56
VIPAS39Q9H9C1 AC093166.2-201ENST00000455969 1017 ntBASIC5.32□□□□□ -1.56
VIPAS39Q9H9C1 RN7SL254P-201ENST00000460609 284 ntBASIC5.32□□□□□ -1.56
VIPAS39Q9H9C1 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.32□□□□□ -1.56
VIPAS39Q9H9C1 NENFP3-201ENST00000503735 313 ntBASIC5.32□□□□□ -1.56
VIPAS39Q9H9C1 HMGB1P44-201ENST00000508597 572 ntBASIC5.32□□□□□ -1.56
VIPAS39Q9H9C1 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.32□□□□□ -1.56
VIPAS39Q9H9C1 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
VIPAS39Q9H9C1 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.32□□□□□ -1.56
VIPAS39Q9H9C1 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.32□□□□□ -1.56
VIPAS39Q9H9C1 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.32□□□□□ -1.56
VIPAS39Q9H9C1 AC005252.1-201ENST00000604518 1063 ntBASIC5.32□□□□□ -1.56
VIPAS39Q9H9C1 AC091167.5-201ENST00000605689 894 ntBASIC5.32□□□□□ -1.56
VIPAS39Q9H9C1 AC020658.4-201ENST00000613987 684 ntBASIC5.32□□□□□ -1.56
VIPAS39Q9H9C1 uc_338.18-201ENST00000615451 175 ntBASIC5.32□□□□□ -1.56
VIPAS39Q9H9C1 AL121890.2-201ENST00000617644 465 ntBASIC5.32□□□□□ -1.56
VIPAS39Q9H9C1 AC118658.2-201ENST00000618697 459 ntBASIC5.32□□□□□ -1.56
VIPAS39Q9H9C1 AL390318.1-201ENST00000624564 687 ntBASIC5.32□□□□□ -1.56
VIPAS39Q9H9C1 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
VIPAS39Q9H9C1 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
VIPAS39Q9H9C1 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
VIPAS39Q9H9C1 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
VIPAS39Q9H9C1 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
VIPAS39Q9H9C1 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
VIPAS39Q9H9C1 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.32□□□□□ -1.56
VIPAS39Q9H9C1 MRE11P1-201ENST00000464884 2127 ntBASIC5.32□□□□□ -1.56
VIPAS39Q9H9C1 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
VIPAS39Q9H9C1 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.32□□□□□ -1.56
VIPAS39Q9H9C1 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
VIPAS39Q9H9C1 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
VIPAS39Q9H9C1 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
VIPAS39Q9H9C1 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
VIPAS39Q9H9C1 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
VIPAS39Q9H9C1 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.31□□□□□ -1.56
VIPAS39Q9H9C1 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.31□□□□□ -1.56
VIPAS39Q9H9C1 CASC19-221ENST00000641309 1382 ntBASIC5.31□□□□□ -1.56
VIPAS39Q9H9C1 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
VIPAS39Q9H9C1 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
VIPAS39Q9H9C1 AL592291.1-201ENST00000403830 352 ntBASIC5.31□□□□□ -1.56
VIPAS39Q9H9C1 AC244453.4-201ENST00000419150 388 ntBASIC5.31□□□□□ -1.56
VIPAS39Q9H9C1 FABP7P1-201ENST00000424004 391 ntBASIC5.31□□□□□ -1.56
VIPAS39Q9H9C1 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
VIPAS39Q9H9C1 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.31□□□□□ -1.56
VIPAS39Q9H9C1 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.31□□□□□ -1.56
VIPAS39Q9H9C1 RN7SL441P-201ENST00000492388 296 ntBASIC5.31□□□□□ -1.56
VIPAS39Q9H9C1 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.31□□□□□ -1.56
VIPAS39Q9H9C1 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC5.31□□□□□ -1.56
VIPAS39Q9H9C1 SNORA48.9-201ENST00000516419 162 ntBASIC5.31□□□□□ -1.56
VIPAS39Q9H9C1 IGKV3D-25-201ENST00000519599 235 ntBASIC5.31□□□□□ -1.56
VIPAS39Q9H9C1 HMGB1P42-201ENST00000532126 553 ntBASIC5.31□□□□□ -1.56
VIPAS39Q9H9C1 AP004607.2-201ENST00000533949 322 ntBASIC5.31□□□□□ -1.56
VIPAS39Q9H9C1 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
VIPAS39Q9H9C1 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.31□□□□□ -1.56
VIPAS39Q9H9C1 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
VIPAS39Q9H9C1 LINC00556-201ENST00000569603 412 ntBASIC5.31□□□□□ -1.56
VIPAS39Q9H9C1 AC005341.1-201ENST00000571086 708 ntBASIC5.31□□□□□ -1.56
VIPAS39Q9H9C1 AL078601.3-201ENST00000573303 535 ntBASIC5.31□□□□□ -1.56
VIPAS39Q9H9C1 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.31□□□□□ -1.56
VIPAS39Q9H9C1 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC5.31□□□□□ -1.56
VIPAS39Q9H9C1 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC5.31□□□□□ -1.56
VIPAS39Q9H9C1 MIR6885-201ENST00000612241 66 ntBASIC5.31□□□□□ -1.56
VIPAS39Q9H9C1 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
VIPAS39Q9H9C1 MAPK10-286ENST00000641208 8747 ntBASIC5.31□□□□□ -1.56
VIPAS39Q9H9C1 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
VIPAS39Q9H9C1 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.31□□□□□ -1.56
VIPAS39Q9H9C1 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
VIPAS39Q9H9C1 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
VIPAS39Q9H9C1 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.3□□□□□ -1.56
VIPAS39Q9H9C1 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 173.8 ms