Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 SP1-202ENST00000426431 7603 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
VPS13CQ709C8 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.04□□□□□ -1.76
VPS13CQ709C8 RN7SL542P-201ENST00000467147 294 ntBASIC4.04□□□□□ -1.76
VPS13CQ709C8 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.04□□□□□ -1.76
VPS13CQ709C8 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC4.04□□□□□ -1.76
VPS13CQ709C8 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC4.04□□□□□ -1.76
VPS13CQ709C8 AC100847.1-201ENST00000611316 481 ntBASIC4.04□□□□□ -1.76
VPS13CQ709C8 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
VPS13CQ709C8 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
VPS13CQ709C8 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
VPS13CQ709C8 NFIB-218ENST00000636432 1953 ntTSL 5 BASIC4.04□□□□□ -1.76
VPS13CQ709C8 METTL2B-204ENST00000480046 5743 ntTSL 2 BASIC4.04□□□□□ -1.76
VPS13CQ709C8 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
VPS13CQ709C8 SLITRK1-201ENST00000377084 5189 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
VPS13CQ709C8 KIAA0100-201ENST00000389003 6852 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
VPS13CQ709C8 DNAH11-202ENST00000409508 14167 ntAPPRIS P2 TSL 5 BASIC4.03□□□□□ -1.76
VPS13CQ709C8 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC4.03□□□□□ -1.76
VPS13CQ709C8 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
VPS13CQ709C8 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
VPS13CQ709C8 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
VPS13CQ709C8 U3.28-201ENST00000391249 210 ntBASIC4.03□□□□□ -1.76
VPS13CQ709C8 AL136116.2-201ENST00000404020 785 ntBASIC4.03□□□□□ -1.76
VPS13CQ709C8 LINC02210-201ENST00000444561 288 ntBASIC4.03□□□□□ -1.76
VPS13CQ709C8 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.03□□□□□ -1.76
VPS13CQ709C8 MIR5699-201ENST00000578903 90 ntBASIC4.03□□□□□ -1.76
VPS13CQ709C8 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.03□□□□□ -1.76
VPS13CQ709C8 MIR6075-201ENST00000620782 95 ntBASIC4.03□□□□□ -1.76
VPS13CQ709C8 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
VPS13CQ709C8 CASC19-260ENST00000641828 2001 ntBASIC4.03□□□□□ -1.76
VPS13CQ709C8 ABCC13-202ENST00000463099 3842 ntBASIC4.03□□□□□ -1.76
VPS13CQ709C8 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.03□□□□□ -1.76
VPS13CQ709C8 ZFX-204ENST00000379188 7513 ntTSL 5 BASIC4.03□□□□□ -1.76
VPS13CQ709C8 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
VPS13CQ709C8 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
VPS13CQ709C8 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
VPS13CQ709C8 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
VPS13CQ709C8 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
VPS13CQ709C8 AL590240.1-201ENST00000334118 313 ntBASIC4.03□□□□□ -1.76
VPS13CQ709C8 AC008171.1-201ENST00000395058 200 ntBASIC4.03□□□□□ -1.76
VPS13CQ709C8 PRSS3P4-201ENST00000453323 162 ntBASIC4.03□□□□□ -1.76
VPS13CQ709C8 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.03□□□□□ -1.76
VPS13CQ709C8 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC4.03□□□□□ -1.76
VPS13CQ709C8 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.03□□□□□ -1.76
VPS13CQ709C8 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.03□□□□□ -1.76
VPS13CQ709C8 AL672167.1-203ENST00000641299 2975 ntBASIC4.03□□□□□ -1.76
VPS13CQ709C8 LMO7-207ENST00000465261 5580 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
VPS13CQ709C8 DDX52-213ENST00000617633 6362 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
VPS13CQ709C8 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
VPS13CQ709C8 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC4.03□□□□□ -1.76
VPS13CQ709C8 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
VPS13CQ709C8 KLC1-204ENST00000348520 15091 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
VPS13CQ709C8 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC4.03□□□□□ -1.76
VPS13CQ709C8 F5-202ENST00000367797 7024 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
VPS13CQ709C8 RNU1-59P-201ENST00000364829 162 ntBASIC4.03□□□□□ -1.76
VPS13CQ709C8 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
VPS13CQ709C8 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.03□□□□□ -1.76
VPS13CQ709C8 MIR3939-201ENST00000582614 106 ntBASIC4.03□□□□□ -1.76
VPS13CQ709C8 MIR3158-1-201ENST00000583596 81 ntBASIC4.03□□□□□ -1.76
VPS13CQ709C8 AP001357.1-201ENST00000586304 1053 ntBASIC4.03□□□□□ -1.76
VPS13CQ709C8 BNIP3P35-201ENST00000604530 490 ntBASIC4.03□□□□□ -1.76
VPS13CQ709C8 U1.25-201ENST00000614085 162 ntBASIC4.03□□□□□ -1.76
VPS13CQ709C8 U1.34-201ENST00000618578 162 ntBASIC4.03□□□□□ -1.76
VPS13CQ709C8 U1.31-201ENST00000620022 160 ntBASIC4.03□□□□□ -1.76
VPS13CQ709C8 NFASC-204ENST00000401399 10205 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
VPS13CQ709C8 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
VPS13CQ709C8 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.03□□□□□ -1.76
VPS13CQ709C8 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.77
VPS13CQ709C8 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
VPS13CQ709C8 ZNF226-213ENST00000588883 5972 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
VPS13CQ709C8 AL355916.1-202ENST00000508827 5103 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
VPS13CQ709C8 PEG10-206ENST00000612941 6392 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
VPS13CQ709C8 PEG10-209ENST00000617526 6392 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
VPS13CQ709C8 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
VPS13CQ709C8 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
VPS13CQ709C8 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
VPS13CQ709C8 ABLIM1-206ENST00000392952 6841 ntTSL 5 BASIC4.02□□□□□ -1.77
VPS13CQ709C8 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
VPS13CQ709C8 RN7SKP16-201ENST00000410180 299 ntBASIC4.02□□□□□ -1.77
VPS13CQ709C8 AL732292.1-201ENST00000426692 226 ntBASIC4.02□□□□□ -1.77
VPS13CQ709C8 RPL34P27-201ENST00000428810 349 ntBASIC4.02□□□□□ -1.77
VPS13CQ709C8 AL162591.2-201ENST00000449634 317 ntBASIC4.02□□□□□ -1.77
VPS13CQ709C8 snoU13.24-201ENST00000458998 104 ntBASIC4.02□□□□□ -1.77
VPS13CQ709C8 RN7SL189P-201ENST00000468631 289 ntBASIC4.02□□□□□ -1.77
VPS13CQ709C8 RPS27AP16-201ENST00000492222 470 ntBASIC4.02□□□□□ -1.77
VPS13CQ709C8 AC093840.1-201ENST00000511599 336 ntBASIC4.02□□□□□ -1.77
VPS13CQ709C8 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.02□□□□□ -1.77
VPS13CQ709C8 OR8R1P-201ENST00000543943 764 ntBASIC4.02□□□□□ -1.77
VPS13CQ709C8 ARF4P1-201ENST00000605447 541 ntBASIC4.02□□□□□ -1.77
VPS13CQ709C8 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
VPS13CQ709C8 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
VPS13CQ709C8 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
VPS13CQ709C8 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
VPS13CQ709C8 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.02□□□□□ -1.77
VPS13CQ709C8 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
VPS13CQ709C8 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
VPS13CQ709C8 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
VPS13CQ709C8 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
VPS13CQ709C8 STAB2-201ENST00000388887 8251 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
VPS13CQ709C8 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
VPS13CQ709C8 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms