Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 TCAM1P-205ENST00000478379 3317 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
VARSP26640 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
VARSP26640 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC7.57□□□□□ -1.2
VARSP26640 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
VARSP26640 NUMB-214ENST00000555238 3588 ntAPPRIS ALT1 TSL 1 (best) BASIC7.56□□□□□ -1.2
VARSP26640 MAPK10-241ENST00000639234 2985 ntTSL 5 BASIC7.56□□□□□ -1.2
VARSP26640 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC7.56□□□□□ -1.2
VARSP26640 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC7.56□□□□□ -1.2
VARSP26640 LINC00299-201ENST00000430192 1760 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
VARSP26640 CEP57-207ENST00000537677 1647 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
VARSP26640 CR1-203ENST00000367051 7469 ntTSL 5 BASIC7.56□□□□□ -1.2
VARSP26640 CR1-204ENST00000367052 7469 ntTSL 5 BASIC7.56□□□□□ -1.2
VARSP26640 CR1-205ENST00000367053 7469 ntTSL 5 BASIC7.56□□□□□ -1.2
VARSP26640 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC7.56□□□□□ -1.2
VARSP26640 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC7.56□□□□□ -1.2
VARSP26640 NME8-201ENST00000199447 2312 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
VARSP26640 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC7.56□□□□□ -1.2
VARSP26640 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
VARSP26640 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
VARSP26640 LINC01095-202ENST00000507726 1715 ntTSL 2 BASIC7.56□□□□□ -1.2
VARSP26640 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
VARSP26640 AC068860.1-201ENST00000623701 3736 ntBASIC7.56□□□□□ -1.2
VARSP26640 SPATA19-201ENST00000299140 861 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
VARSP26640 HNRNPCL4-201ENST00000323770 882 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
VARSP26640 U8.3-201ENST00000363321 132 ntBASIC7.56□□□□□ -1.2
VARSP26640 RNU6-1322P-201ENST00000364309 107 ntBASIC7.56□□□□□ -1.2
VARSP26640 RN7SKP50-201ENST00000364694 315 ntBASIC7.56□□□□□ -1.2
VARSP26640 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC7.56□□□□□ -1.2
VARSP26640 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC7.56□□□□□ -1.2
VARSP26640 MIR16-1-201ENST00000385271 89 ntBASIC7.56□□□□□ -1.2
VARSP26640 TXNP7-201ENST00000406296 293 ntBASIC7.56□□□□□ -1.2
VARSP26640 RNU2-39P-201ENST00000410604 198 ntBASIC7.56□□□□□ -1.2
VARSP26640 RN7SKP261-201ENST00000410948 278 ntBASIC7.56□□□□□ -1.2
VARSP26640 IFNA12P-201ENST00000413147 571 ntBASIC7.56□□□□□ -1.2
VARSP26640 RPL17P17-201ENST00000419491 557 ntBASIC7.56□□□□□ -1.2
VARSP26640 RAD23BP1-201ENST00000421404 1227 ntBASIC7.56□□□□□ -1.2
VARSP26640 DSTNP5-201ENST00000427921 523 ntBASIC7.56□□□□□ -1.2
VARSP26640 Z98949.2-201ENST00000440996 144 ntBASIC7.56□□□□□ -1.2
VARSP26640 AC023274.2-201ENST00000445264 521 ntBASIC7.56□□□□□ -1.2
VARSP26640 NPM1P39-201ENST00000449818 867 ntBASIC7.56□□□□□ -1.2
VARSP26640 AL606490.1-201ENST00000452266 765 ntBASIC7.56□□□□□ -1.2
VARSP26640 DHFRP3-201ENST00000455595 559 ntBASIC7.56□□□□□ -1.2
VARSP26640 RPL5P12-201ENST00000477071 851 ntBASIC7.56□□□□□ -1.2
VARSP26640 RPS4XP17-201ENST00000479057 754 ntBASIC7.56□□□□□ -1.2
VARSP26640 AC099521.1-201ENST00000482557 334 ntBASIC7.56□□□□□ -1.2
VARSP26640 PPP4R2-207ENST00000495566 559 ntTSL 3 BASIC7.56□□□□□ -1.2
VARSP26640 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC7.56□□□□□ -1.2
VARSP26640 BTF3P13-201ENST00000513224 490 ntBASIC7.56□□□□□ -1.2
VARSP26640 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC7.56□□□□□ -1.2
VARSP26640 AP001189.2-201ENST00000527320 189 ntBASIC7.56□□□□□ -1.2
VARSP26640 AP003119.2-201ENST00000528075 336 ntTSL 3 BASIC7.56□□□□□ -1.2
VARSP26640 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
VARSP26640 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC7.56□□□□□ -1.2
VARSP26640 CHCHD3P2-201ENST00000550751 639 ntBASIC7.56□□□□□ -1.2
VARSP26640 AC026111.1-201ENST00000551090 1195 ntBASIC7.56□□□□□ -1.2
VARSP26640 UBE2CP1-201ENST00000557130 554 ntBASIC7.56□□□□□ -1.2
VARSP26640 CCDC32-203ENST00000558113 576 ntTSL 3 BASIC7.56□□□□□ -1.2
VARSP26640 AC142086.3-201ENST00000563896 802 ntBASIC7.56□□□□□ -1.2
VARSP26640 AC007861.1-201ENST00000576671 674 ntTSL 5 BASIC7.56□□□□□ -1.2
VARSP26640 TTN-AS1-210ENST00000578746 677 ntTSL 3 BASIC7.56□□□□□ -1.2
VARSP26640 FARSA-AS1-201ENST00000592636 241 ntTSL 5 BASIC7.56□□□□□ -1.2
VARSP26640 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC7.56□□□□□ -1.2
VARSP26640 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC7.56□□□□□ -1.2
VARSP26640 AC140658.6-201ENST00000603958 201 ntBASIC7.56□□□□□ -1.2
VARSP26640 AC112187.2-201ENST00000604345 283 ntBASIC7.56□□□□□ -1.2
VARSP26640 AC011816.2-201ENST00000607089 556 ntBASIC7.56□□□□□ -1.2
VARSP26640 AC019193.3-201ENST00000609144 554 ntBASIC7.56□□□□□ -1.2
VARSP26640 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC7.56□□□□□ -1.2
VARSP26640 AC245028.3-201ENST00000618197 285 ntBASIC7.56□□□□□ -1.2
VARSP26640 AL450226.2-201ENST00000622913 439 ntBASIC7.56□□□□□ -1.2
VARSP26640 GLUD1P2-202ENST00000630097 606 ntTSL 3 BASIC7.56□□□□□ -1.2
VARSP26640 AC026950.2-201ENST00000633456 470 ntTSL 3 BASIC7.56□□□□□ -1.2
VARSP26640 U6.107-201ENST00000637108 79 ntBASIC7.56□□□□□ -1.2
VARSP26640 BCL2L11-224ENST00000639340 243 ntTSL 5 BASIC7.56□□□□□ -1.2
VARSP26640 RAD17P2-201ENST00000451754 1977 ntBASIC7.56□□□□□ -1.2
VARSP26640 KCNK2-203ENST00000444842 3379 ntAPPRIS ALT1 TSL 1 (best) BASIC7.56□□□□□ -1.2
VARSP26640 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
VARSP26640 MBTPS2-201ENST00000365779 4457 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
VARSP26640 STOM-201ENST00000286713 3010 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
VARSP26640 EEF1A1P3-201ENST00000417549 1385 ntBASIC7.56□□□□□ -1.2
VARSP26640 STX18-AS1-206ENST00000608184 3047 ntTSL 3 BASIC7.56□□□□□ -1.2
VARSP26640 B3GALT1-201ENST00000392690 5094 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
VARSP26640 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
VARSP26640 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
VARSP26640 TRIM2-203ENST00000437508 3832 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
VARSP26640 LINC00208-201ENST00000304233 2150 ntTSL 2 BASIC7.56□□□□□ -1.2
VARSP26640 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC7.56□□□□□ -1.2
VARSP26640 AC100871.1-201ENST00000507871 1456 ntBASIC7.55□□□□□ -1.2
VARSP26640 LINC00536-201ENST00000505156 2692 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
VARSP26640 HSPD1P1-201ENST00000503199 1726 ntBASIC7.55□□□□□ -1.2
VARSP26640 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
VARSP26640 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
VARSP26640 RLIMP2-201ENST00000427891 1563 ntBASIC7.55□□□□□ -1.2
VARSP26640 RGS7-202ENST00000366563 2206 ntTSL 5 BASIC7.55□□□□□ -1.2
VARSP26640 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
VARSP26640 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
VARSP26640 TMC1-202ENST00000340019 3068 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
VARSP26640 MIR369-201ENST00000362155 70 ntBASIC7.55□□□□□ -1.2
VARSP26640 RNU6-462P-201ENST00000362659 105 ntBASIC7.55□□□□□ -1.2
VARSP26640 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms