Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC7.34□□□□□ -1.23
PCDHB11Q9Y5F2 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC7.34□□□□□ -1.23
PCDHB11Q9Y5F2 SDCBPP2-201ENST00000424643 885 ntBASIC7.34□□□□□ -1.23
PCDHB11Q9Y5F2 NIPA2P1-201ENST00000426223 976 ntBASIC7.34□□□□□ -1.23
PCDHB11Q9Y5F2 MTCO2P12-201ENST00000427426 682 ntBASIC7.34□□□□□ -1.23
PCDHB11Q9Y5F2 AC109583.1-201ENST00000432156 268 ntBASIC7.34□□□□□ -1.23
PCDHB11Q9Y5F2 PSMD10P2-201ENST00000432890 672 ntBASIC7.34□□□□□ -1.23
PCDHB11Q9Y5F2 AL035691.1-201ENST00000434562 595 ntTSL 3 BASIC7.34□□□□□ -1.23
PCDHB11Q9Y5F2 OR52B5P-201ENST00000435337 951 ntBASIC7.34□□□□□ -1.23
PCDHB11Q9Y5F2 TAAR7P-201ENST00000436141 242 ntBASIC7.34□□□□□ -1.23
PCDHB11Q9Y5F2 IGKV6D-21-201ENST00000436451 409 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
PCDHB11Q9Y5F2 PA2G4P1-201ENST00000442248 1197 ntBASIC7.34□□□□□ -1.23
PCDHB11Q9Y5F2 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC7.34□□□□□ -1.23
PCDHB11Q9Y5F2 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC7.34□□□□□ -1.23
PCDHB11Q9Y5F2 C1DP4-201ENST00000455429 424 ntBASIC7.34□□□□□ -1.23
PCDHB11Q9Y5F2 OR7E7P-201ENST00000455678 1012 ntBASIC7.34□□□□□ -1.23
PCDHB11Q9Y5F2 RPL12P40-201ENST00000467028 488 ntBASIC7.34□□□□□ -1.23
PCDHB11Q9Y5F2 RN7SL233P-201ENST00000469988 277 ntBASIC7.34□□□□□ -1.23
PCDHB11Q9Y5F2 CREM-236ENST00000487763 429 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
PCDHB11Q9Y5F2 AC007182.2-201ENST00000489251 402 ntBASIC7.34□□□□□ -1.23
PCDHB11Q9Y5F2 NPM1P27-201ENST00000502784 830 ntBASIC7.34□□□□□ -1.23
PCDHB11Q9Y5F2 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC7.34□□□□□ -1.23
PCDHB11Q9Y5F2 AC098799.3-201ENST00000506095 438 ntBASIC7.34□□□□□ -1.23
PCDHB11Q9Y5F2 AC010486.1-201ENST00000511793 424 ntBASIC7.34□□□□□ -1.23
PCDHB11Q9Y5F2 AC023595.1-201ENST00000536216 564 ntTSL 4 BASIC7.34□□□□□ -1.23
PCDHB11Q9Y5F2 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC7.34□□□□□ -1.23
PCDHB11Q9Y5F2 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC7.34□□□□□ -1.23
PCDHB11Q9Y5F2 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC7.34□□□□□ -1.23
PCDHB11Q9Y5F2 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC7.34□□□□□ -1.23
PCDHB11Q9Y5F2 LINC00640-201ENST00000554409 498 ntTSL 3 BASIC7.34□□□□□ -1.23
PCDHB11Q9Y5F2 AL121821.2-201ENST00000556081 394 ntBASIC7.34□□□□□ -1.23
PCDHB11Q9Y5F2 AC103808.6-201ENST00000578035 464 ntTSL 3 BASIC7.34□□□□□ -1.23
PCDHB11Q9Y5F2 SS18L2P2-201ENST00000583960 235 ntBASIC7.34□□□□□ -1.23
PCDHB11Q9Y5F2 AC011712.1-201ENST00000588959 234 ntBASIC7.34□□□□□ -1.23
PCDHB11Q9Y5F2 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC7.34□□□□□ -1.23
PCDHB11Q9Y5F2 BNIP3P23-201ENST00000599655 511 ntBASIC7.34□□□□□ -1.23
PCDHB11Q9Y5F2 AC012507.3-201ENST00000603556 477 ntBASIC7.34□□□□□ -1.23
PCDHB11Q9Y5F2 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC7.34□□□□□ -1.23
PCDHB11Q9Y5F2 SNORD91A-202ENST00000609620 191 ntBASIC7.34□□□□□ -1.23
PCDHB11Q9Y5F2 AC008115.3-201ENST00000614874 549 ntBASIC7.34□□□□□ -1.23
PCDHB11Q9Y5F2 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC7.34□□□□□ -1.23
PCDHB11Q9Y5F2 STK4-202ENST00000372806 6342 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
PCDHB11Q9Y5F2 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC7.34□□□□□ -1.23
PCDHB11Q9Y5F2 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC7.34□□□□□ -1.23
PCDHB11Q9Y5F2 GPD2-203ENST00000409674 2397 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
PCDHB11Q9Y5F2 IQCA1-204ENST00000409907 3281 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
PCDHB11Q9Y5F2 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC7.34□□□□□ -1.23
PCDHB11Q9Y5F2 PGM3-212ENST00000513973 6107 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
PCDHB11Q9Y5F2 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
PCDHB11Q9Y5F2 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
PCDHB11Q9Y5F2 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC7.34□□□□□ -1.24
PCDHB11Q9Y5F2 AC006213.6-201ENST00000623722 4179 ntBASIC7.34□□□□□ -1.24
PCDHB11Q9Y5F2 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
PCDHB11Q9Y5F2 AC095038.1-201ENST00000429248 1591 ntBASIC7.33□□□□□ -1.24
PCDHB11Q9Y5F2 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC7.33□□□□□ -1.24
PCDHB11Q9Y5F2 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
PCDHB11Q9Y5F2 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC7.33□□□□□ -1.24
PCDHB11Q9Y5F2 RNASEL-201ENST00000367559 4238 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
PCDHB11Q9Y5F2 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
PCDHB11Q9Y5F2 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
PCDHB11Q9Y5F2 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
PCDHB11Q9Y5F2 NBEA-202ENST00000379922 3794 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
PCDHB11Q9Y5F2 STN1-202ENST00000369764 1311 ntAPPRIS P1 TSL 2 BASIC7.33□□□□□ -1.24
PCDHB11Q9Y5F2 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
PCDHB11Q9Y5F2 CCL16-205ENST00000611905 1506 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
PCDHB11Q9Y5F2 DUBR-202ENST00000466734 2737 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
PCDHB11Q9Y5F2 ZNF438-208ENST00000538351 3284 ntAPPRIS ALT2 TSL 2 BASIC7.33□□□□□ -1.24
PCDHB11Q9Y5F2 TMBIM6-209ENST00000547798 2494 ntAPPRIS ALT2 TSL 2 BASIC7.33□□□□□ -1.24
PCDHB11Q9Y5F2 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
PCDHB11Q9Y5F2 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC7.33□□□□□ -1.24
PCDHB11Q9Y5F2 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
PCDHB11Q9Y5F2 RN7SKP211-201ENST00000363328 315 ntBASIC7.33□□□□□ -1.24
PCDHB11Q9Y5F2 RNY4P34-201ENST00000364779 95 ntBASIC7.33□□□□□ -1.24
PCDHB11Q9Y5F2 RNU6-809P-201ENST00000384461 107 ntBASIC7.33□□□□□ -1.24
PCDHB11Q9Y5F2 SNORD116-23-201ENST00000384645 92 ntBASIC7.33□□□□□ -1.24
PCDHB11Q9Y5F2 IGLJ2-201ENST00000390322 175 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
PCDHB11Q9Y5F2 RNA5SP118-201ENST00000410385 109 ntBASIC7.33□□□□□ -1.24
PCDHB11Q9Y5F2 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC7.33□□□□□ -1.24
PCDHB11Q9Y5F2 AC004986.1-201ENST00000414855 607 ntBASIC7.33□□□□□ -1.24
PCDHB11Q9Y5F2 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC7.33□□□□□ -1.24
PCDHB11Q9Y5F2 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC7.33□□□□□ -1.24
PCDHB11Q9Y5F2 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC7.33□□□□□ -1.24
PCDHB11Q9Y5F2 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC7.33□□□□□ -1.24
PCDHB11Q9Y5F2 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC7.33□□□□□ -1.24
PCDHB11Q9Y5F2 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC7.33□□□□□ -1.24
PCDHB11Q9Y5F2 USP9YP15-201ENST00000442391 422 ntBASIC7.33□□□□□ -1.24
PCDHB11Q9Y5F2 LINC00578-202ENST00000442937 612 ntTSL 3 BASIC7.33□□□□□ -1.24
PCDHB11Q9Y5F2 SLC31A1P1-201ENST00000451221 567 ntBASIC7.33□□□□□ -1.24
PCDHB11Q9Y5F2 CHIAP1-201ENST00000456220 995 ntBASIC7.33□□□□□ -1.24
PCDHB11Q9Y5F2 HNRNPDLP3-201ENST00000456745 380 ntBASIC7.33□□□□□ -1.24
PCDHB11Q9Y5F2 RPS4XP19-201ENST00000460237 736 ntBASIC7.33□□□□□ -1.24
PCDHB11Q9Y5F2 RPS10P28-201ENST00000480396 498 ntBASIC7.33□□□□□ -1.24
PCDHB11Q9Y5F2 AC096576.1-201ENST00000489014 359 ntBASIC7.33□□□□□ -1.24
PCDHB11Q9Y5F2 RN7SL569P-201ENST00000494652 288 ntBASIC7.33□□□□□ -1.24
PCDHB11Q9Y5F2 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC7.33□□□□□ -1.24
PCDHB11Q9Y5F2 AMTN-202ENST00000504451 761 ntAPPRIS ALT1 TSL 1 (best) BASIC7.33□□□□□ -1.24
PCDHB11Q9Y5F2 AC024451.1-201ENST00000508013 779 ntBASIC7.33□□□□□ -1.24
PCDHB11Q9Y5F2 AC093325.1-201ENST00000508378 326 ntBASIC7.33□□□□□ -1.24
PCDHB11Q9Y5F2 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
PCDHB11Q9Y5F2 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC7.33□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms