Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 AC104771.1-201ENST00000603335 964 ntBASIC23.22■■□□□ 1.31
CYP46A1Q9Y6A2 AC133041.1-202ENST00000642053 222 ntBASIC23.22■■□□□ 1.31
CYP46A1Q9Y6A2 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
CYP46A1Q9Y6A2 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
CYP46A1Q9Y6A2 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CYP46A1Q9Y6A2 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
CYP46A1Q9Y6A2 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CYP46A1Q9Y6A2 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
CYP46A1Q9Y6A2 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CYP46A1Q9Y6A2 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CYP46A1Q9Y6A2 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC23.22■■□□□ 1.31
CYP46A1Q9Y6A2 AC018445.3-201ENST00000624177 1945 ntBASIC23.21■■□□□ 1.31
CYP46A1Q9Y6A2 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
CYP46A1Q9Y6A2 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CYP46A1Q9Y6A2 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CYP46A1Q9Y6A2 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
CYP46A1Q9Y6A2 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CYP46A1Q9Y6A2 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC23.21■■□□□ 1.31
CYP46A1Q9Y6A2 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CYP46A1Q9Y6A2 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CYP46A1Q9Y6A2 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC23.21■■□□□ 1.31
CYP46A1Q9Y6A2 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CYP46A1Q9Y6A2 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
CYP46A1Q9Y6A2 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC23.21■■□□□ 1.31
CYP46A1Q9Y6A2 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC23.21■■□□□ 1.31
CYP46A1Q9Y6A2 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC23.21■■□□□ 1.31
CYP46A1Q9Y6A2 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC23.21■■□□□ 1.31
CYP46A1Q9Y6A2 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
CYP46A1Q9Y6A2 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC23.21■■□□□ 1.31
CYP46A1Q9Y6A2 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
CYP46A1Q9Y6A2 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC23.21■■□□□ 1.31
CYP46A1Q9Y6A2 STX6-204ENST00000542060 4809 ntTSL 2 BASIC23.21■■□□□ 1.31
CYP46A1Q9Y6A2 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
CYP46A1Q9Y6A2 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CYP46A1Q9Y6A2 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC23.2■■□□□ 1.3
CYP46A1Q9Y6A2 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CYP46A1Q9Y6A2 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CYP46A1Q9Y6A2 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CYP46A1Q9Y6A2 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC23.2■■□□□ 1.3
CYP46A1Q9Y6A2 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC23.2■■□□□ 1.3
CYP46A1Q9Y6A2 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC23.2■■□□□ 1.3
CYP46A1Q9Y6A2 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CYP46A1Q9Y6A2 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
CYP46A1Q9Y6A2 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC23.2■■□□□ 1.3
CYP46A1Q9Y6A2 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CYP46A1Q9Y6A2 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CYP46A1Q9Y6A2 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
CYP46A1Q9Y6A2 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC23.2■■□□□ 1.3
CYP46A1Q9Y6A2 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC23.2■■□□□ 1.3
CYP46A1Q9Y6A2 MAX-217ENST00000557277 728 ntTSL 3 BASIC23.2■■□□□ 1.3
CYP46A1Q9Y6A2 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC23.2■■□□□ 1.3
CYP46A1Q9Y6A2 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC23.2■■□□□ 1.3
CYP46A1Q9Y6A2 AC142086.2-201ENST00000569753 217 ntBASIC23.2■■□□□ 1.3
CYP46A1Q9Y6A2 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC23.2■■□□□ 1.3
CYP46A1Q9Y6A2 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC23.2■■□□□ 1.3
CYP46A1Q9Y6A2 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
CYP46A1Q9Y6A2 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC23.2■■□□□ 1.3
CYP46A1Q9Y6A2 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CYP46A1Q9Y6A2 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC23.2■■□□□ 1.3
CYP46A1Q9Y6A2 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CYP46A1Q9Y6A2 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
CYP46A1Q9Y6A2 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CYP46A1Q9Y6A2 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
CYP46A1Q9Y6A2 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC23.19■■□□□ 1.3
CYP46A1Q9Y6A2 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CYP46A1Q9Y6A2 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CYP46A1Q9Y6A2 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
CYP46A1Q9Y6A2 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC23.19■■□□□ 1.3
CYP46A1Q9Y6A2 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CYP46A1Q9Y6A2 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CYP46A1Q9Y6A2 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC23.19■■□□□ 1.3
CYP46A1Q9Y6A2 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC23.19■■□□□ 1.3
CYP46A1Q9Y6A2 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
CYP46A1Q9Y6A2 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC23.19■■□□□ 1.3
CYP46A1Q9Y6A2 OR2A1-AS1-207ENST00000486094 819 ntBASIC23.19■■□□□ 1.3
CYP46A1Q9Y6A2 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC23.19■■□□□ 1.3
CYP46A1Q9Y6A2 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC23.19■■□□□ 1.3
CYP46A1Q9Y6A2 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC23.19■■□□□ 1.3
CYP46A1Q9Y6A2 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CYP46A1Q9Y6A2 BX323043.1-201ENST00000641006 1765 ntBASIC23.19■■□□□ 1.3
CYP46A1Q9Y6A2 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CYP46A1Q9Y6A2 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CYP46A1Q9Y6A2 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC23.19■■□□□ 1.3
CYP46A1Q9Y6A2 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CYP46A1Q9Y6A2 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CYP46A1Q9Y6A2 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC23.18■■□□□ 1.3
CYP46A1Q9Y6A2 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
CYP46A1Q9Y6A2 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CYP46A1Q9Y6A2 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CYP46A1Q9Y6A2 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
CYP46A1Q9Y6A2 ABHD17AP6-201ENST00000458502 1044 ntBASIC23.18■■□□□ 1.3
CYP46A1Q9Y6A2 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
CYP46A1Q9Y6A2 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
CYP46A1Q9Y6A2 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CYP46A1Q9Y6A2 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CYP46A1Q9Y6A2 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CYP46A1Q9Y6A2 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CYP46A1Q9Y6A2 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CYP46A1Q9Y6A2 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC23.18■■□□□ 1.3
CYP46A1Q9Y6A2 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms