Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGB6Q9Y5F9 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
PCDHGB6Q9Y5F9 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
PCDHGB6Q9Y5F9 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
PCDHGB6Q9Y5F9 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGB6Q9Y5F9 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGB6Q9Y5F9 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGB6Q9Y5F9 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
PCDHGB6Q9Y5F9 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
PCDHGB6Q9Y5F9 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHGB6Q9Y5F9 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHGB6Q9Y5F9 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHGB6Q9Y5F9 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHGB6Q9Y5F9 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHGB6Q9Y5F9 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
PCDHGB6Q9Y5F9 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHGB6Q9Y5F9 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
PCDHGB6Q9Y5F9 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHGB6Q9Y5F9 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHGB6Q9Y5F9 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.48■□□□□ 0.55
PCDHGB6Q9Y5F9 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
PCDHGB6Q9Y5F9 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHGB6Q9Y5F9 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
PCDHGB6Q9Y5F9 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHGB6Q9Y5F9 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHGB6Q9Y5F9 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHGB6Q9Y5F9 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHGB6Q9Y5F9 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHGB6Q9Y5F9 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.48■□□□□ 0.55
PCDHGB6Q9Y5F9 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHGB6Q9Y5F9 AC112907.3-201ENST00000577781 2400 ntBASIC18.48■□□□□ 0.55
PCDHGB6Q9Y5F9 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHGB6Q9Y5F9 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
PCDHGB6Q9Y5F9 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.47■□□□□ 0.55
PCDHGB6Q9Y5F9 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.47■□□□□ 0.55
PCDHGB6Q9Y5F9 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGB6Q9Y5F9 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGB6Q9Y5F9 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.47■□□□□ 0.55
PCDHGB6Q9Y5F9 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
PCDHGB6Q9Y5F9 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGB6Q9Y5F9 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.47■□□□□ 0.55
PCDHGB6Q9Y5F9 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.47■□□□□ 0.55
PCDHGB6Q9Y5F9 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGB6Q9Y5F9 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGB6Q9Y5F9 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGB6Q9Y5F9 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGB6Q9Y5F9 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGB6Q9Y5F9 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.47■□□□□ 0.55
PCDHGB6Q9Y5F9 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.47■□□□□ 0.55
PCDHGB6Q9Y5F9 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.47■□□□□ 0.55
PCDHGB6Q9Y5F9 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.47■□□□□ 0.55
PCDHGB6Q9Y5F9 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.47■□□□□ 0.55
PCDHGB6Q9Y5F9 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
PCDHGB6Q9Y5F9 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGB6Q9Y5F9 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
PCDHGB6Q9Y5F9 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
PCDHGB6Q9Y5F9 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGB6Q9Y5F9 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.47■□□□□ 0.55
PCDHGB6Q9Y5F9 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGB6Q9Y5F9 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.46■□□□□ 0.55
PCDHGB6Q9Y5F9 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
PCDHGB6Q9Y5F9 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGB6Q9Y5F9 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.46■□□□□ 0.55
PCDHGB6Q9Y5F9 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDHGB6Q9Y5F9 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGB6Q9Y5F9 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGB6Q9Y5F9 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGB6Q9Y5F9 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
PCDHGB6Q9Y5F9 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGB6Q9Y5F9 AC012618.2-201ENST00000428058 849 ntBASIC18.46■□□□□ 0.55
PCDHGB6Q9Y5F9 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.46■□□□□ 0.55
PCDHGB6Q9Y5F9 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGB6Q9Y5F9 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDHGB6Q9Y5F9 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.46■□□□□ 0.55
PCDHGB6Q9Y5F9 MIR4497-201ENST00000583208 89 ntBASIC18.46■□□□□ 0.55
PCDHGB6Q9Y5F9 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGB6Q9Y5F9 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGB6Q9Y5F9 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDHGB6Q9Y5F9 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGB6Q9Y5F9 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGB6Q9Y5F9 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGB6Q9Y5F9 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
PCDHGB6Q9Y5F9 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGB6Q9Y5F9 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGB6Q9Y5F9 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGB6Q9Y5F9 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
PCDHGB6Q9Y5F9 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
PCDHGB6Q9Y5F9 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGB6Q9Y5F9 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
PCDHGB6Q9Y5F9 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.45■□□□□ 0.54
PCDHGB6Q9Y5F9 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGB6Q9Y5F9 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGB6Q9Y5F9 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGB6Q9Y5F9 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.45■□□□□ 0.54
PCDHGB6Q9Y5F9 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
PCDHGB6Q9Y5F9 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
PCDHGB6Q9Y5F9 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
PCDHGB6Q9Y5F9 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGB6Q9Y5F9 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGB6Q9Y5F9 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms