Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHB7Q9Y5E2 BX119927.1-201ENST00000636596 1552 ntBASIC21.13■□□□□ 0.97
PCDHB7Q9Y5E2 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHB7Q9Y5E2 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHB7Q9Y5E2 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHB7Q9Y5E2 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21.13■□□□□ 0.97
PCDHB7Q9Y5E2 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHB7Q9Y5E2 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHB7Q9Y5E2 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHB7Q9Y5E2 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHB7Q9Y5E2 AC096733.2-201ENST00000609937 1394 ntBASIC21.12■□□□□ 0.97
PCDHB7Q9Y5E2 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHB7Q9Y5E2 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHB7Q9Y5E2 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHB7Q9Y5E2 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC21.12■□□□□ 0.97
PCDHB7Q9Y5E2 AK4P3-201ENST00000418260 669 ntBASIC21.12■□□□□ 0.97
PCDHB7Q9Y5E2 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
PCDHB7Q9Y5E2 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC21.12■□□□□ 0.97
PCDHB7Q9Y5E2 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHB7Q9Y5E2 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHB7Q9Y5E2 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHB7Q9Y5E2 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.11■□□□□ 0.97
PCDHB7Q9Y5E2 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC21.11■□□□□ 0.97
PCDHB7Q9Y5E2 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHB7Q9Y5E2 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHB7Q9Y5E2 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHB7Q9Y5E2 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.11■□□□□ 0.97
PCDHB7Q9Y5E2 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHB7Q9Y5E2 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.11■□□□□ 0.97
PCDHB7Q9Y5E2 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC21.11■□□□□ 0.97
PCDHB7Q9Y5E2 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC21.11■□□□□ 0.97
PCDHB7Q9Y5E2 AC091390.4-202ENST00000476426 537 ntBASIC21.11■□□□□ 0.97
PCDHB7Q9Y5E2 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC21.11■□□□□ 0.97
PCDHB7Q9Y5E2 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
PCDHB7Q9Y5E2 LTBR-211ENST00000543190 785 ntTSL 3 BASIC21.11■□□□□ 0.97
PCDHB7Q9Y5E2 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHB7Q9Y5E2 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
PCDHB7Q9Y5E2 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC21.11■□□□□ 0.97
PCDHB7Q9Y5E2 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
PCDHB7Q9Y5E2 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
PCDHB7Q9Y5E2 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.11■□□□□ 0.97
PCDHB7Q9Y5E2 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHB7Q9Y5E2 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHB7Q9Y5E2 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.1■□□□□ 0.97
PCDHB7Q9Y5E2 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHB7Q9Y5E2 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHB7Q9Y5E2 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHB7Q9Y5E2 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHB7Q9Y5E2 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHB7Q9Y5E2 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHB7Q9Y5E2 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
PCDHB7Q9Y5E2 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
PCDHB7Q9Y5E2 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC21.1■□□□□ 0.97
PCDHB7Q9Y5E2 SLC25A1P2-201ENST00000430693 912 ntBASIC21.1■□□□□ 0.97
PCDHB7Q9Y5E2 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC21.1■□□□□ 0.97
PCDHB7Q9Y5E2 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC21.1■□□□□ 0.97
PCDHB7Q9Y5E2 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC21.1■□□□□ 0.97
PCDHB7Q9Y5E2 GPX4-207ENST00000589115 812 ntTSL 2 BASIC21.1■□□□□ 0.97
PCDHB7Q9Y5E2 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHB7Q9Y5E2 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC21.1■□□□□ 0.97
PCDHB7Q9Y5E2 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC21.1■□□□□ 0.97
PCDHB7Q9Y5E2 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC21.1■□□□□ 0.97
PCDHB7Q9Y5E2 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC21.1■□□□□ 0.97
PCDHB7Q9Y5E2 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHB7Q9Y5E2 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHB7Q9Y5E2 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC21.09■□□□□ 0.97
PCDHB7Q9Y5E2 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
PCDHB7Q9Y5E2 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHB7Q9Y5E2 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHB7Q9Y5E2 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHB7Q9Y5E2 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHB7Q9Y5E2 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHB7Q9Y5E2 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHB7Q9Y5E2 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
PCDHB7Q9Y5E2 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC21.09■□□□□ 0.97
PCDHB7Q9Y5E2 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHB7Q9Y5E2 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHB7Q9Y5E2 DERL1-203ENST00000419562 918 ntTSL 2 BASIC21.09■□□□□ 0.97
PCDHB7Q9Y5E2 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
PCDHB7Q9Y5E2 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHB7Q9Y5E2 AP001271.2-201ENST00000624018 1556 ntBASIC21.09■□□□□ 0.97
PCDHB7Q9Y5E2 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHB7Q9Y5E2 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21.09■□□□□ 0.97
PCDHB7Q9Y5E2 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
PCDHB7Q9Y5E2 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC21.09■□□□□ 0.97
PCDHB7Q9Y5E2 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHB7Q9Y5E2 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.08■□□□□ 0.97
PCDHB7Q9Y5E2 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
PCDHB7Q9Y5E2 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHB7Q9Y5E2 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC21.08■□□□□ 0.97
PCDHB7Q9Y5E2 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHB7Q9Y5E2 Z85996.1-201ENST00000494644 937 ntBASIC21.08■□□□□ 0.97
PCDHB7Q9Y5E2 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
PCDHB7Q9Y5E2 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHB7Q9Y5E2 LINC01238-205ENST00000567549 1107 ntBASIC21.08■□□□□ 0.97
PCDHB7Q9Y5E2 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC21.08■□□□□ 0.97
PCDHB7Q9Y5E2 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PCDHB7Q9Y5E2 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.96
PCDHB7Q9Y5E2 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
PCDHB7Q9Y5E2 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms