Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
HHLA3Q9XRX5 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HHLA3Q9XRX5 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
HHLA3Q9XRX5 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HHLA3Q9XRX5 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HHLA3Q9XRX5 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC14.31□□□□□ -0.12
HHLA3Q9XRX5 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC14.31□□□□□ -0.12
HHLA3Q9XRX5 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
HHLA3Q9XRX5 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
HHLA3Q9XRX5 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC14.3□□□□□ -0.12
HHLA3Q9XRX5 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HHLA3Q9XRX5 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HHLA3Q9XRX5 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HHLA3Q9XRX5 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
HHLA3Q9XRX5 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
HHLA3Q9XRX5 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
HHLA3Q9XRX5 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HHLA3Q9XRX5 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC14.3□□□□□ -0.12
HHLA3Q9XRX5 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HHLA3Q9XRX5 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HHLA3Q9XRX5 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC14.3□□□□□ -0.12
HHLA3Q9XRX5 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
HHLA3Q9XRX5 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HHLA3Q9XRX5 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HHLA3Q9XRX5 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HHLA3Q9XRX5 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
HHLA3Q9XRX5 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC14.3□□□□□ -0.12
HHLA3Q9XRX5 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HHLA3Q9XRX5 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HHLA3Q9XRX5 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HHLA3Q9XRX5 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HHLA3Q9XRX5 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
HHLA3Q9XRX5 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HHLA3Q9XRX5 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HHLA3Q9XRX5 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
HHLA3Q9XRX5 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
HHLA3Q9XRX5 AC020916.1-201ENST00000587762 1774 ntBASIC14.29□□□□□ -0.12
HHLA3Q9XRX5 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC14.29□□□□□ -0.12
HHLA3Q9XRX5 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HHLA3Q9XRX5 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HHLA3Q9XRX5 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
HHLA3Q9XRX5 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HHLA3Q9XRX5 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HHLA3Q9XRX5 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
HHLA3Q9XRX5 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC14.29□□□□□ -0.12
HHLA3Q9XRX5 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HHLA3Q9XRX5 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
HHLA3Q9XRX5 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC14.29□□□□□ -0.12
HHLA3Q9XRX5 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HHLA3Q9XRX5 AF201337.1-201ENST00000520239 748 ntBASIC14.29□□□□□ -0.12
HHLA3Q9XRX5 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HHLA3Q9XRX5 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HHLA3Q9XRX5 GCK-205ENST00000437084 1385 ntTSL 5 BASIC14.29□□□□□ -0.12
HHLA3Q9XRX5 AC010980.2-201ENST00000587099 1412 ntBASIC14.29□□□□□ -0.12
HHLA3Q9XRX5 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HHLA3Q9XRX5 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HHLA3Q9XRX5 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HHLA3Q9XRX5 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
HHLA3Q9XRX5 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HHLA3Q9XRX5 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HHLA3Q9XRX5 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC14.29□□□□□ -0.12
HHLA3Q9XRX5 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC14.29□□□□□ -0.12
HHLA3Q9XRX5 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC14.29□□□□□ -0.12
HHLA3Q9XRX5 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC14.29□□□□□ -0.12
HHLA3Q9XRX5 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HHLA3Q9XRX5 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HHLA3Q9XRX5 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
HHLA3Q9XRX5 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC14.29□□□□□ -0.12
HHLA3Q9XRX5 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HHLA3Q9XRX5 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HHLA3Q9XRX5 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HHLA3Q9XRX5 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
HHLA3Q9XRX5 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC14.29□□□□□ -0.12
HHLA3Q9XRX5 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HHLA3Q9XRX5 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HHLA3Q9XRX5 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HHLA3Q9XRX5 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HHLA3Q9XRX5 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HHLA3Q9XRX5 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HHLA3Q9XRX5 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HHLA3Q9XRX5 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HHLA3Q9XRX5 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HHLA3Q9XRX5 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
HHLA3Q9XRX5 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
HHLA3Q9XRX5 STK25-205ENST00000405883 1904 ntTSL 2 BASIC14.28□□□□□ -0.12
HHLA3Q9XRX5 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC14.28□□□□□ -0.12
HHLA3Q9XRX5 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC14.28□□□□□ -0.12
HHLA3Q9XRX5 AC006970.2-201ENST00000450065 779 ntBASIC14.28□□□□□ -0.12
HHLA3Q9XRX5 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC14.28□□□□□ -0.12
HHLA3Q9XRX5 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HHLA3Q9XRX5 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC14.28□□□□□ -0.12
HHLA3Q9XRX5 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC14.28□□□□□ -0.12
HHLA3Q9XRX5 AC105036.2-201ENST00000569468 176 ntBASIC14.28□□□□□ -0.12
HHLA3Q9XRX5 CYP2T3P-201ENST00000601990 817 ntBASIC14.28□□□□□ -0.12
HHLA3Q9XRX5 AL589743.5-201ENST00000616611 1050 ntBASIC14.28□□□□□ -0.12
HHLA3Q9XRX5 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HHLA3Q9XRX5 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HHLA3Q9XRX5 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HHLA3Q9XRX5 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC14.28□□□□□ -0.12
HHLA3Q9XRX5 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC14.27□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms