Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHRNA9Q9UGM1 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHRNA9Q9UGM1 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.86■□□□□ 0.45
CHRNA9Q9UGM1 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.86■□□□□ 0.45
CHRNA9Q9UGM1 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.86■□□□□ 0.45
CHRNA9Q9UGM1 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHRNA9Q9UGM1 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.86■□□□□ 0.45
CHRNA9Q9UGM1 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CHRNA9Q9UGM1 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHRNA9Q9UGM1 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CHRNA9Q9UGM1 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHRNA9Q9UGM1 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHRNA9Q9UGM1 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.86■□□□□ 0.45
CHRNA9Q9UGM1 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHRNA9Q9UGM1 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHRNA9Q9UGM1 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.86■□□□□ 0.45
CHRNA9Q9UGM1 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHRNA9Q9UGM1 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
CHRNA9Q9UGM1 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CHRNA9Q9UGM1 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.85■□□□□ 0.45
CHRNA9Q9UGM1 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHRNA9Q9UGM1 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHRNA9Q9UGM1 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
CHRNA9Q9UGM1 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHRNA9Q9UGM1 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CHRNA9Q9UGM1 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHRNA9Q9UGM1 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.85■□□□□ 0.45
CHRNA9Q9UGM1 POM121L13P-201ENST00000422362 380 ntBASIC17.85■□□□□ 0.45
CHRNA9Q9UGM1 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.85■□□□□ 0.45
CHRNA9Q9UGM1 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
CHRNA9Q9UGM1 CD99P1-205ENST00000527459 561 ntBASIC17.85■□□□□ 0.45
CHRNA9Q9UGM1 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CHRNA9Q9UGM1 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.85■□□□□ 0.45
CHRNA9Q9UGM1 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.85■□□□□ 0.45
CHRNA9Q9UGM1 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC17.85■□□□□ 0.45
CHRNA9Q9UGM1 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.85■□□□□ 0.45
CHRNA9Q9UGM1 BX323043.1-201ENST00000641006 1765 ntBASIC17.85■□□□□ 0.45
CHRNA9Q9UGM1 AC087289.5-201ENST00000586076 3175 ntBASIC17.85■□□□□ 0.45
CHRNA9Q9UGM1 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHRNA9Q9UGM1 AC018445.3-201ENST00000624177 1945 ntBASIC17.84■□□□□ 0.45
CHRNA9Q9UGM1 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.84■□□□□ 0.45
CHRNA9Q9UGM1 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHRNA9Q9UGM1 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CHRNA9Q9UGM1 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.84■□□□□ 0.45
CHRNA9Q9UGM1 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CHRNA9Q9UGM1 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CHRNA9Q9UGM1 TFP1-202ENST00000475455 1573 ntBASIC17.84■□□□□ 0.45
CHRNA9Q9UGM1 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.84■□□□□ 0.45
CHRNA9Q9UGM1 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CHRNA9Q9UGM1 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHRNA9Q9UGM1 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHRNA9Q9UGM1 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC17.84■□□□□ 0.45
CHRNA9Q9UGM1 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CHRNA9Q9UGM1 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.84■□□□□ 0.45
CHRNA9Q9UGM1 AC026366.1-201ENST00000488803 879 ntBASIC17.84■□□□□ 0.45
CHRNA9Q9UGM1 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.84■□□□□ 0.45
CHRNA9Q9UGM1 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.84■□□□□ 0.45
CHRNA9Q9UGM1 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CHRNA9Q9UGM1 AC008403.3-201ENST00000598924 454 ntBASIC17.84■□□□□ 0.45
CHRNA9Q9UGM1 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.84■□□□□ 0.45
CHRNA9Q9UGM1 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHRNA9Q9UGM1 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHRNA9Q9UGM1 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CHRNA9Q9UGM1 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CHRNA9Q9UGM1 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.84■□□□□ 0.45
CHRNA9Q9UGM1 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHRNA9Q9UGM1 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.84■□□□□ 0.45
CHRNA9Q9UGM1 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
CHRNA9Q9UGM1 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CHRNA9Q9UGM1 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CHRNA9Q9UGM1 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CHRNA9Q9UGM1 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
CHRNA9Q9UGM1 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.83■□□□□ 0.45
CHRNA9Q9UGM1 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CHRNA9Q9UGM1 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
CHRNA9Q9UGM1 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CHRNA9Q9UGM1 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.83■□□□□ 0.45
CHRNA9Q9UGM1 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CHRNA9Q9UGM1 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
CHRNA9Q9UGM1 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHRNA9Q9UGM1 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.83■□□□□ 0.44
CHRNA9Q9UGM1 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CHRNA9Q9UGM1 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.83■□□□□ 0.44
CHRNA9Q9UGM1 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHRNA9Q9UGM1 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CHRNA9Q9UGM1 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHRNA9Q9UGM1 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.83■□□□□ 0.44
CHRNA9Q9UGM1 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.83■□□□□ 0.44
CHRNA9Q9UGM1 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.83■□□□□ 0.44
CHRNA9Q9UGM1 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.44
CHRNA9Q9UGM1 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CHRNA9Q9UGM1 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.83■□□□□ 0.44
CHRNA9Q9UGM1 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
CHRNA9Q9UGM1 AL121829.2-201ENST00000620908 328 ntBASIC17.83■□□□□ 0.44
CHRNA9Q9UGM1 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHRNA9Q9UGM1 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.83■□□□□ 0.44
CHRNA9Q9UGM1 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.83■□□□□ 0.44
CHRNA9Q9UGM1 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHRNA9Q9UGM1 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHRNA9Q9UGM1 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms