Protein–RNA interactions for Protein: Q9UEU0

VTI1B, Vesicle transport through interaction with t-SNAREs homolog 1B, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BQ9UEU0 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
VTI1BQ9UEU0 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
VTI1BQ9UEU0 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.24■□□□□ 0.67
VTI1BQ9UEU0 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.24■□□□□ 0.67
VTI1BQ9UEU0 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.24■□□□□ 0.67
VTI1BQ9UEU0 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.24■□□□□ 0.67
VTI1BQ9UEU0 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
VTI1BQ9UEU0 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
VTI1BQ9UEU0 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VTI1BQ9UEU0 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VTI1BQ9UEU0 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
VTI1BQ9UEU0 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
VTI1BQ9UEU0 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
VTI1BQ9UEU0 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
VTI1BQ9UEU0 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
VTI1BQ9UEU0 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
VTI1BQ9UEU0 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VTI1BQ9UEU0 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.23■□□□□ 0.67
VTI1BQ9UEU0 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
VTI1BQ9UEU0 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
VTI1BQ9UEU0 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VTI1BQ9UEU0 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.23■□□□□ 0.67
VTI1BQ9UEU0 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VTI1BQ9UEU0 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.23■□□□□ 0.67
VTI1BQ9UEU0 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VTI1BQ9UEU0 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
VTI1BQ9UEU0 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
VTI1BQ9UEU0 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VTI1BQ9UEU0 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VTI1BQ9UEU0 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
VTI1BQ9UEU0 AC120498.9-201ENST00000339021 3867 ntBASIC19.23■□□□□ 0.67
VTI1BQ9UEU0 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
VTI1BQ9UEU0 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VTI1BQ9UEU0 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VTI1BQ9UEU0 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
VTI1BQ9UEU0 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.22■□□□□ 0.67
VTI1BQ9UEU0 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
VTI1BQ9UEU0 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
VTI1BQ9UEU0 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
VTI1BQ9UEU0 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
VTI1BQ9UEU0 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VTI1BQ9UEU0 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.22■□□□□ 0.67
VTI1BQ9UEU0 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VTI1BQ9UEU0 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
VTI1BQ9UEU0 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VTI1BQ9UEU0 ID1-201ENST00000376105 1233 ntBASIC19.22■□□□□ 0.67
VTI1BQ9UEU0 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.22■□□□□ 0.67
VTI1BQ9UEU0 AC093787.1-201ENST00000450396 207 ntBASIC19.22■□□□□ 0.67
VTI1BQ9UEU0 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.22■□□□□ 0.67
VTI1BQ9UEU0 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.22■□□□□ 0.67
VTI1BQ9UEU0 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
VTI1BQ9UEU0 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
VTI1BQ9UEU0 AC010980.2-201ENST00000587099 1412 ntBASIC19.22■□□□□ 0.67
VTI1BQ9UEU0 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
VTI1BQ9UEU0 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
VTI1BQ9UEU0 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.22■□□□□ 0.67
VTI1BQ9UEU0 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VTI1BQ9UEU0 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.21■□□□□ 0.67
VTI1BQ9UEU0 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.21■□□□□ 0.67
VTI1BQ9UEU0 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
VTI1BQ9UEU0 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VTI1BQ9UEU0 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
VTI1BQ9UEU0 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
VTI1BQ9UEU0 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
VTI1BQ9UEU0 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VTI1BQ9UEU0 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
VTI1BQ9UEU0 HLA-G-202ENST00000376815 851 ntBASIC19.21■□□□□ 0.67
VTI1BQ9UEU0 HLA-G-203ENST00000376818 1127 ntBASIC19.21■□□□□ 0.67
VTI1BQ9UEU0 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.21■□□□□ 0.67
VTI1BQ9UEU0 TSPY6P-201ENST00000448518 926 ntBASIC19.21■□□□□ 0.67
VTI1BQ9UEU0 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.21■□□□□ 0.67
VTI1BQ9UEU0 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VTI1BQ9UEU0 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.21■□□□□ 0.67
VTI1BQ9UEU0 AL109923.1-201ENST00000618799 583 ntBASIC19.21■□□□□ 0.67
VTI1BQ9UEU0 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.21■□□□□ 0.67
VTI1BQ9UEU0 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.21■□□□□ 0.67
VTI1BQ9UEU0 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
VTI1BQ9UEU0 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VTI1BQ9UEU0 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
VTI1BQ9UEU0 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
VTI1BQ9UEU0 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
VTI1BQ9UEU0 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
VTI1BQ9UEU0 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
VTI1BQ9UEU0 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
VTI1BQ9UEU0 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VTI1BQ9UEU0 MKRN4P-201ENST00000444706 1521 ntBASIC19.2■□□□□ 0.66
VTI1BQ9UEU0 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VTI1BQ9UEU0 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
VTI1BQ9UEU0 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
VTI1BQ9UEU0 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VTI1BQ9UEU0 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
VTI1BQ9UEU0 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VTI1BQ9UEU0 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.2■□□□□ 0.66
VTI1BQ9UEU0 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
VTI1BQ9UEU0 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VTI1BQ9UEU0 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
VTI1BQ9UEU0 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
VTI1BQ9UEU0 MCRIP2P1-201ENST00000394346 511 ntBASIC19.2■□□□□ 0.66
VTI1BQ9UEU0 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
VTI1BQ9UEU0 GUSBP6-202ENST00000438529 1198 ntBASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms