Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 AC092119.3-201ENST00000612618 583 ntBASIC20.88■□□□□ 0.93
CHD7Q9P2D1 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CHD7Q9P2D1 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CHD7Q9P2D1 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.88■□□□□ 0.93
CHD7Q9P2D1 AL845331.1-201ENST00000424978 1190 ntBASIC20.88■□□□□ 0.93
CHD7Q9P2D1 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC20.88■□□□□ 0.93
CHD7Q9P2D1 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
CHD7Q9P2D1 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.88■□□□□ 0.93
CHD7Q9P2D1 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHD7Q9P2D1 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.88■□□□□ 0.93
CHD7Q9P2D1 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.88■□□□□ 0.93
CHD7Q9P2D1 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CHD7Q9P2D1 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CHD7Q9P2D1 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CHD7Q9P2D1 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC20.88■□□□□ 0.93
CHD7Q9P2D1 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC20.88■□□□□ 0.93
CHD7Q9P2D1 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CHD7Q9P2D1 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.88■□□□□ 0.93
CHD7Q9P2D1 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.88■□□□□ 0.93
CHD7Q9P2D1 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
CHD7Q9P2D1 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHD7Q9P2D1 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CHD7Q9P2D1 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHD7Q9P2D1 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CHD7Q9P2D1 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CHD7Q9P2D1 UNC93B7-201ENST00000509439 705 ntBASIC20.87■□□□□ 0.93
CHD7Q9P2D1 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CHD7Q9P2D1 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CHD7Q9P2D1 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC20.87■□□□□ 0.93
CHD7Q9P2D1 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHD7Q9P2D1 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHD7Q9P2D1 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHD7Q9P2D1 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
CHD7Q9P2D1 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHD7Q9P2D1 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.87■□□□□ 0.93
CHD7Q9P2D1 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CHD7Q9P2D1 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC20.87■□□□□ 0.93
CHD7Q9P2D1 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.87■□□□□ 0.93
CHD7Q9P2D1 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.87■□□□□ 0.93
CHD7Q9P2D1 KRT8P17-201ENST00000453110 1448 ntBASIC20.86■□□□□ 0.93
CHD7Q9P2D1 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.86■□□□□ 0.93
CHD7Q9P2D1 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHD7Q9P2D1 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHD7Q9P2D1 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC20.86■□□□□ 0.93
CHD7Q9P2D1 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
CHD7Q9P2D1 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
CHD7Q9P2D1 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC20.86■□□□□ 0.93
CHD7Q9P2D1 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.86■□□□□ 0.93
CHD7Q9P2D1 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.86■□□□□ 0.93
CHD7Q9P2D1 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC20.86■□□□□ 0.93
CHD7Q9P2D1 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CHD7Q9P2D1 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CHD7Q9P2D1 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHD7Q9P2D1 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC20.86■□□□□ 0.93
CHD7Q9P2D1 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
CHD7Q9P2D1 AC009078.2-202ENST00000463353 338 ntBASIC20.86■□□□□ 0.93
CHD7Q9P2D1 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC20.86■□□□□ 0.93
CHD7Q9P2D1 AC131212.4-201ENST00000623606 975 ntBASIC20.86■□□□□ 0.93
CHD7Q9P2D1 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHD7Q9P2D1 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHD7Q9P2D1 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHD7Q9P2D1 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CHD7Q9P2D1 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHD7Q9P2D1 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
CHD7Q9P2D1 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHD7Q9P2D1 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHD7Q9P2D1 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CHD7Q9P2D1 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC20.85■□□□□ 0.93
CHD7Q9P2D1 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHD7Q9P2D1 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.85■□□□□ 0.93
CHD7Q9P2D1 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
CHD7Q9P2D1 AC006538.3-201ENST00000612495 578 ntBASIC20.85■□□□□ 0.93
CHD7Q9P2D1 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
CHD7Q9P2D1 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.85■□□□□ 0.93
CHD7Q9P2D1 SPDYE15P-201ENST00000424157 909 ntBASIC20.85■□□□□ 0.93
CHD7Q9P2D1 AL353719.1-201ENST00000566847 864 ntBASIC20.85■□□□□ 0.93
CHD7Q9P2D1 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CHD7Q9P2D1 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.85■□□□□ 0.93
CHD7Q9P2D1 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHD7Q9P2D1 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.85■□□□□ 0.93
CHD7Q9P2D1 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CHD7Q9P2D1 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHD7Q9P2D1 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC20.85■□□□□ 0.93
CHD7Q9P2D1 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC20.85■□□□□ 0.93
CHD7Q9P2D1 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.85■□□□□ 0.93
CHD7Q9P2D1 AP003041.3-201ENST00000527151 707 ntBASIC20.85■□□□□ 0.93
CHD7Q9P2D1 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.85■□□□□ 0.93
CHD7Q9P2D1 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHD7Q9P2D1 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHD7Q9P2D1 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CHD7Q9P2D1 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CHD7Q9P2D1 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHD7Q9P2D1 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC20.84■□□□□ 0.93
CHD7Q9P2D1 CKBP1-201ENST00000565489 1086 ntBASIC20.84■□□□□ 0.93
CHD7Q9P2D1 AC111152.3-201ENST00000569699 673 ntBASIC20.84■□□□□ 0.93
CHD7Q9P2D1 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CHD7Q9P2D1 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHD7Q9P2D1 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.84■□□□□ 0.93
CHD7Q9P2D1 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHD7Q9P2D1 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms