Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.98■□□□□ 0.47
LRFN1Q9P244 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRFN1Q9P244 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
LRFN1Q9P244 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
LRFN1Q9P244 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRFN1Q9P244 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRFN1Q9P244 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.98■□□□□ 0.47
LRFN1Q9P244 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
LRFN1Q9P244 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRFN1Q9P244 AP005212.1-201ENST00000581547 1997 ntBASIC17.97■□□□□ 0.47
LRFN1Q9P244 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRFN1Q9P244 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRFN1Q9P244 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRFN1Q9P244 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRFN1Q9P244 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LRFN1Q9P244 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.97■□□□□ 0.47
LRFN1Q9P244 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.97■□□□□ 0.47
LRFN1Q9P244 AL445675.2-201ENST00000620291 557 ntBASIC17.97■□□□□ 0.47
LRFN1Q9P244 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LRFN1Q9P244 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRFN1Q9P244 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
LRFN1Q9P244 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
LRFN1Q9P244 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.97■□□□□ 0.47
LRFN1Q9P244 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRFN1Q9P244 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
LRFN1Q9P244 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.97■□□□□ 0.47
LRFN1Q9P244 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LRFN1Q9P244 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.97■□□□□ 0.47
LRFN1Q9P244 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRFN1Q9P244 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRFN1Q9P244 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.96■□□□□ 0.47
LRFN1Q9P244 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRFN1Q9P244 AP001271.2-201ENST00000624018 1556 ntBASIC17.96■□□□□ 0.47
LRFN1Q9P244 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LRFN1Q9P244 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.96■□□□□ 0.47
LRFN1Q9P244 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LRFN1Q9P244 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LRFN1Q9P244 AC116562.2-201ENST00000507042 360 ntBASIC17.96■□□□□ 0.47
LRFN1Q9P244 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.96■□□□□ 0.47
LRFN1Q9P244 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
LRFN1Q9P244 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.96■□□□□ 0.47
LRFN1Q9P244 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRFN1Q9P244 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LRFN1Q9P244 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LRFN1Q9P244 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
LRFN1Q9P244 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LRFN1Q9P244 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LRFN1Q9P244 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRFN1Q9P244 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.96■□□□□ 0.47
LRFN1Q9P244 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LRFN1Q9P244 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRFN1Q9P244 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRFN1Q9P244 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LRFN1Q9P244 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.96■□□□□ 0.46
LRFN1Q9P244 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.95■□□□□ 0.46
LRFN1Q9P244 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.95■□□□□ 0.46
LRFN1Q9P244 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRFN1Q9P244 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRFN1Q9P244 AL512408.1-201ENST00000569378 2000 ntBASIC17.95■□□□□ 0.46
LRFN1Q9P244 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LRFN1Q9P244 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.95■□□□□ 0.46
LRFN1Q9P244 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.95■□□□□ 0.46
LRFN1Q9P244 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.95■□□□□ 0.46
LRFN1Q9P244 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRFN1Q9P244 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LRFN1Q9P244 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.95■□□□□ 0.46
LRFN1Q9P244 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.95■□□□□ 0.46
LRFN1Q9P244 AP000525.1-201ENST00000608286 694 ntBASIC17.95■□□□□ 0.46
LRFN1Q9P244 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
LRFN1Q9P244 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LRFN1Q9P244 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRFN1Q9P244 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRFN1Q9P244 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.95■□□□□ 0.46
LRFN1Q9P244 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRFN1Q9P244 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRFN1Q9P244 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.95■□□□□ 0.46
LRFN1Q9P244 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRFN1Q9P244 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRFN1Q9P244 AC079598.2-202ENST00000546624 1451 ntBASIC17.95■□□□□ 0.46
LRFN1Q9P244 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRFN1Q9P244 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRFN1Q9P244 TMEM179-206ENST00000616017 1645 ntBASIC17.94■□□□□ 0.46
LRFN1Q9P244 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
LRFN1Q9P244 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
LRFN1Q9P244 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRFN1Q9P244 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRFN1Q9P244 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.94■□□□□ 0.46
LRFN1Q9P244 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRFN1Q9P244 FEM1AP1-201ENST00000431297 1995 ntBASIC17.94■□□□□ 0.46
LRFN1Q9P244 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRFN1Q9P244 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.94■□□□□ 0.46
LRFN1Q9P244 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
LRFN1Q9P244 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.94■□□□□ 0.46
LRFN1Q9P244 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LRFN1Q9P244 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.94■□□□□ 0.46
LRFN1Q9P244 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LRFN1Q9P244 FSCN1P1-201ENST00000568912 1481 ntBASIC17.94■□□□□ 0.46
LRFN1Q9P244 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.94■□□□□ 0.46
LRFN1Q9P244 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
LRFN1Q9P244 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms