Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VAPAQ9P0L0 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VAPAQ9P0L0 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VAPAQ9P0L0 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
VAPAQ9P0L0 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.51■□□□□ 0.55
VAPAQ9P0L0 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VAPAQ9P0L0 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.51■□□□□ 0.55
VAPAQ9P0L0 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
VAPAQ9P0L0 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.51■□□□□ 0.55
VAPAQ9P0L0 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.51■□□□□ 0.55
VAPAQ9P0L0 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.51■□□□□ 0.55
VAPAQ9P0L0 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.51■□□□□ 0.55
VAPAQ9P0L0 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.51■□□□□ 0.55
VAPAQ9P0L0 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.51■□□□□ 0.55
VAPAQ9P0L0 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.51■□□□□ 0.55
VAPAQ9P0L0 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VAPAQ9P0L0 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
VAPAQ9P0L0 AL161938.1-201ENST00000569833 2180 ntBASIC18.51■□□□□ 0.55
VAPAQ9P0L0 CROCCP3-202ENST00000420820 1947 ntBASIC18.51■□□□□ 0.55
VAPAQ9P0L0 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
VAPAQ9P0L0 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.5■□□□□ 0.55
VAPAQ9P0L0 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.5■□□□□ 0.55
VAPAQ9P0L0 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VAPAQ9P0L0 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VAPAQ9P0L0 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.5■□□□□ 0.55
VAPAQ9P0L0 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VAPAQ9P0L0 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
VAPAQ9P0L0 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.5■□□□□ 0.55
VAPAQ9P0L0 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.5■□□□□ 0.55
VAPAQ9P0L0 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
VAPAQ9P0L0 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
VAPAQ9P0L0 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.5■□□□□ 0.55
VAPAQ9P0L0 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.5■□□□□ 0.55
VAPAQ9P0L0 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.5■□□□□ 0.55
VAPAQ9P0L0 OR10C1-204ENST00000622521 1039 ntBASIC18.5■□□□□ 0.55
VAPAQ9P0L0 AC231657.2-201ENST00000624556 255 ntBASIC18.5■□□□□ 0.55
VAPAQ9P0L0 AL138781.2-201ENST00000617896 1843 ntBASIC18.5■□□□□ 0.55
VAPAQ9P0L0 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
VAPAQ9P0L0 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VAPAQ9P0L0 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
VAPAQ9P0L0 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
VAPAQ9P0L0 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
VAPAQ9P0L0 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.5■□□□□ 0.55
VAPAQ9P0L0 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
VAPAQ9P0L0 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VAPAQ9P0L0 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.5■□□□□ 0.55
VAPAQ9P0L0 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
VAPAQ9P0L0 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
VAPAQ9P0L0 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
VAPAQ9P0L0 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VAPAQ9P0L0 AL049812.1-201ENST00000432563 2267 ntBASIC18.49■□□□□ 0.55
VAPAQ9P0L0 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.49■□□□□ 0.55
VAPAQ9P0L0 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VAPAQ9P0L0 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
VAPAQ9P0L0 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VAPAQ9P0L0 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VAPAQ9P0L0 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.49■□□□□ 0.55
VAPAQ9P0L0 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VAPAQ9P0L0 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VAPAQ9P0L0 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
VAPAQ9P0L0 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VAPAQ9P0L0 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.49■□□□□ 0.55
VAPAQ9P0L0 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.49■□□□□ 0.55
VAPAQ9P0L0 BID-214ENST00000617586 542 ntTSL 5 BASIC18.49■□□□□ 0.55
VAPAQ9P0L0 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.49■□□□□ 0.55
VAPAQ9P0L0 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
VAPAQ9P0L0 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
VAPAQ9P0L0 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
VAPAQ9P0L0 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.49■□□□□ 0.55
VAPAQ9P0L0 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
VAPAQ9P0L0 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VAPAQ9P0L0 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
VAPAQ9P0L0 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.49■□□□□ 0.55
VAPAQ9P0L0 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VAPAQ9P0L0 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VAPAQ9P0L0 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
VAPAQ9P0L0 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VAPAQ9P0L0 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
VAPAQ9P0L0 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.49■□□□□ 0.55
VAPAQ9P0L0 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.48■□□□□ 0.55
VAPAQ9P0L0 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VAPAQ9P0L0 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VAPAQ9P0L0 AC116351.2-201ENST00000606540 1585 ntBASIC18.48■□□□□ 0.55
VAPAQ9P0L0 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.48■□□□□ 0.55
VAPAQ9P0L0 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.48■□□□□ 0.55
VAPAQ9P0L0 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VAPAQ9P0L0 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
VAPAQ9P0L0 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
VAPAQ9P0L0 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.48■□□□□ 0.55
VAPAQ9P0L0 AC007322.1-201ENST00000426983 750 ntBASIC18.48■□□□□ 0.55
VAPAQ9P0L0 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
VAPAQ9P0L0 AC093787.1-201ENST00000450396 207 ntBASIC18.48■□□□□ 0.55
VAPAQ9P0L0 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.48■□□□□ 0.55
VAPAQ9P0L0 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VAPAQ9P0L0 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
VAPAQ9P0L0 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VAPAQ9P0L0 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
VAPAQ9P0L0 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.48■□□□□ 0.55
VAPAQ9P0L0 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.48■□□□□ 0.55
VAPAQ9P0L0 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms